Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is yfhA [C]

Identifier: 197106266

GI number: 197106266

Start: 3217314

End: 3217766

Strand: Direct

Name: yfhA [C]

Synonym: PHZ_c2805

Alternate gene names: 197106266

Gene position: 3217314-3217766 (Clockwise)

Preceding gene: 197106265

Following gene: 197106277

Centisome position: 80.51

GC content: 73.07

Gene sequence:

>453_bases
TTGAGTTGCGTCAAAGCAGCCTTGCGCGGCGCCGGGCATTCTGCCTGCATGCCGCCGAGCCGCCCACCCCTGCCCCCGCT
CATCGTCATCGTCGACGACGACCCTGGCCTGGCCGGAGGGTTGAAGTTCTCCCTCGAGGCCGAGGGCTATCGCGTGGAAA
CGCTGGAGACCGGCGAGGCGCTGCTGCTGCGCGACCTGCCCGAGGCCGACTGCTGCCTGGTGGTGGACGAGCGCCTGCCC
GGGATCAGCGGCCTGAACGCGCTGGCCCAACTCCGCCGGCGGGGCGTGGACCTGCCGGCGCTGCTGATCACCAGCAATCC
CAGCCCGGTGCTGCGGGACGCGGCCGCCGCGGCCGGGACGCCGATCATCGAAAAGCCCCTGCTGGGCGATGCGCTGCTGC
AGCCCATCGCCGACGCCCTGGCCCGGGGGCGCGAAGGCGGCCGGGGGCGTTAG

Upstream 100 bases:

>100_bases
GTCTACCGGGCCAACGTGATGACCAAGACGGGGGCGTCCAGCCTCTCCGAACTGGTCCGGATGGCGCTGCTCGCGGGGTT
CTAGCGGCGCCCGCCCGCCG

Downstream 100 bases:

>100_bases
CCGTCAGTCCTTCGGCGAGCCGCGCAGCCAGACGAAGGCCAGCGGCAGCATGAACACCGCATAGCCGGCGATCACGAGCA
TCAGATAAGGCGTCAGCATG

Product: response regulator

Products: NA

Alternate protein names: Response Regulator Receiver; Response Regulator Receiver Domain Protein; Response Regulator

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSCVKAALRGAGHSACMPPSRPPLPPLIVIVDDDPGLAGGLKFSLEAEGYRVETLETGEALLLRDLPEADCCLVVDERLP
GISGLNALAQLRRRGVDLPALLITSNPSPVLRDAAAAAGTPIIEKPLLGDALLQPIADALARGREGGRGR

Sequences:

>Translated_150_residues
MSCVKAALRGAGHSACMPPSRPPLPPLIVIVDDDPGLAGGLKFSLEAEGYRVETLETGEALLLRDLPEADCCLVVDERLP
GISGLNALAQLRRRGVDLPALLITSNPSPVLRDAAAAAGTPIIEKPLLGDALLQPIADALARGREGGRGR
>Mature_149_residues
SCVKAALRGAGHSACMPPSRPPLPPLIVIVDDDPGLAGGLKFSLEAEGYRVETLETGEALLLRDLPEADCCLVVDERLPG
ISGLNALAQLRRRGVDLPALLITSNPSPVLRDAAAAAGTPIIEKPLLGDALLQPIADALARGREGGRGR

Specific function: Probable Member Of A Two-Component Regulatory System Yfha/Yfhk. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15572; Mature: 15441

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCVKAALRGAGHSACMPPSRPPLPPLIVIVDDDPGLAGGLKFSLEAEGYRVETLETGEA
CHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCE
LLLRDLPEADCCLVVDERLPGISGLNALAQLRRRGVDLPALLITSNPSPVLRDAAAAAGT
EEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCC
PIIEKPLLGDALLQPIADALARGREGGRGR
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SCVKAALRGAGHSACMPPSRPPLPPLIVIVDDDPGLAGGLKFSLEAEGYRVETLETGEA
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCE
LLLRDLPEADCCLVVDERLPGISGLNALAQLRRRGVDLPALLITSNPSPVLRDAAAAAGT
EEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCC
PIIEKPLLGDALLQPIADALARGREGGRGR
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA