| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105898
Identifier: 197105898
GI number: 197105898
Start: 2783406
End: 2785487
Strand: Reverse
Name: 197105898
Synonym: PHZ_c2437
Alternate gene names: NA
Gene position: 2785487-2783406 (Counterclockwise)
Preceding gene: 197105899
Following gene: 197105897
Centisome position: 69.7
GC content: 65.18
Gene sequence:
>2082_bases GTGCGCGCGGCGACCGACGTTGGTGGGACCTTTACGGACCTGGTCTATTACGAAGTTGACCCCGCGACCGGCCGCTCCGG CCAGGTGAAGATCGCTAAGGTCGACACCACCCCCCCGAACTTCGAAGAGGGGGTGGTCGGGGCGCTCGCCAAGGCAAGTA TCGCGCCGGCGAAGCTTGATTTCTTCGCTCACGGCGCCACCGTGGTGATCAACGCGCTGACGGAGCGGAAGGGCGTCAGG ACGGCGCTGATCACGACAGCAGGTTTCCGTGATGTCCTGGAGATCGCCCGCGGGAATCGTCCCGATCTCTTCAACTTCGC CTTTCATAAGCCGAAGCCCTTCGTGGAGCGCCACCTGCGCGCTGAGGTCGTCGAGCGCACGAACTACAAGGGCGAGATCG AACGCCCCGCTGACCTGACCGGGCTCCCGGAGCTCGTCCTGAAGTTCAAGCGTGAGGGCGTGCAGGCGATCGCGGTCGTC TTCCTTCACTCATACATCAACCCGCAGAACGAACAGGCTGTCGTACAGCGACTGCGTGAACTCTGGCCGGAGGTATCCAT CCTCGCGTCCCACGCCGTCAGCCGGGAATGGCGGGAATACGAGCGGACGAGCACCACGGTGCTCTCGGCTTACGTGCACC CTATCGCGGAGCGCTACATCGGCACGCTGGAGGCCAAACTCGCGGAGCAGGGGTTCACCGGCAAACCGTACATGATGCAG TCGAACGGGGGCATCACGACGGCCAGGGCCGCGAAGGCGAACCCGATCACCATGGTCGAGTCCGGCCCCGCCAGCGGCAT ATTCGCGGCGGCCTATGTCGGGAAGGCGATCGGGGCGAACAATCTCATCGTGCTCGACATCGGCGGAACGACCGCCAAGT GCACTCTGATCGAGGAGGGGCATGTCAAGGTCACGACCGAATACTACATCGAACGTGACGGGAAGAACCCGGGCTACCCG ATCCAGACGCCGGTTTCCGACATCGTGGAAATCGGCAACGGCGGTGGGTCGATCGCGTGGGTCGATGCTGGCGGCAAGCT CCATGTCGGGCCGCATTCCGCGGCCGCACGACCGGGGCCGGCGGCCTACGGCCGCGGCGGGGCCAAGGCGACGACGACGG ACGCCAACCTTGTCCTGGGGCGGATCGATCCCGCCAGCTTCGTAGGCGGCGAGCGCGAGCCGGACTGGAAATCGGTCGAA GCTGCTTTTGCGCCTCTGCAGGCGGCGCTCGGCATGAGCCGCGAAGAGGTGGCGCGCGGCATCATCCGGATCGCCAACGC AAACATGACGCGGGCCCTGCGACTCGTATCCACGAACAGGGGGTACGATCCCCGTGACTTCACGCTGATGGCCTTCGGAG GTGGCGGCGCCATGCACGCCCTGGCGCTCGCGGAGGAGCTGAAGGTTCCTCACGTGGTCATCCCGGTGAACTCCTCCGTG TTCTCAGCCTGGGGGATGCTGCTCACCGACCTCCGCCGCGACTACCTTCAGACGCGGATGGCGCCGCTAGGTCCCAGCGC TGTCCCGGTCATGCAGCAGATCTTCGGCGAGCTCGAGGGCGAGGCGCTCAAGGACTACTCGGACGAGAATGAGACGCTGA CGCGCGACGACATCGGCTTCGAGTATCTCGTCGACATGCGCTACGCCGGGCAACAGCACACCGTGAAGGTCCCCTGTATC GGAGCCGGGGACGGCGAGATCGATCTGGAAGCTACGGCGAACGCCTTCCACGGTGCGCACCAGAAGCGCTTCACCTACCG TCTCGATACCGGCATCGAGCTGGTGAACTTCCACCTCATCGCGAAGCGGACTGTGCCAAAGCCGCCGCTAGCGCCGAAAC CGGTGACGGGCCTCAGGCTCGAGGCGGCGATCAAGGGCGCGCGACGCGTGGATTACGATGTCCACGGCGTTCATGACGCG ACCATCTACGACGGACTGCGCCTGGAGCCAGGCATGCACTTCGTCGGTCCGGCGGTGATCCAGGAGCCCTCGGTCACCTG CGTGGTGCCGCCCGGGCATCGCGTCAGCATCGACCAGTTCGGAAACTATCACATCCACCTGTCCTTCGACGGGGAGGCCT AA
Upstream 100 bases:
>100_bases GTACGGGACGCGTGGCGACAGAGGTCCCATGGCGTCGAGATCCAGGCGCCCCTGATCCGCGGGCGCGAGACTGATGAAAT GACGACCCGGAGTAAGTGAA
Downstream 100 bases:
>100_bases CCCGTGTCGTCAAACCTTTTCACGCTCGAGATCATCAAGGATTCGCTGGTGGCGGTCGGCGAAGAGATGTTCAACGCCAT GCTGCGGACCAGCATGAGCC
Product: 5-oxoprolinase (ATP-hydrolyzing)
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MRAATDVGGTFTDLVYYEVDPATGRSGQVKIAKVDTTPPNFEEGVVGALAKASIAPAKLDFFAHGATVVINALTERKGVR TALITTAGFRDVLEIARGNRPDLFNFAFHKPKPFVERHLRAEVVERTNYKGEIERPADLTGLPELVLKFKREGVQAIAVV FLHSYINPQNEQAVVQRLRELWPEVSILASHAVSREWREYERTSTTVLSAYVHPIAERYIGTLEAKLAEQGFTGKPYMMQ SNGGITTARAAKANPITMVESGPASGIFAAAYVGKAIGANNLIVLDIGGTTAKCTLIEEGHVKVTTEYYIERDGKNPGYP IQTPVSDIVEIGNGGGSIAWVDAGGKLHVGPHSAAARPGPAAYGRGGAKATTTDANLVLGRIDPASFVGGEREPDWKSVE AAFAPLQAALGMSREEVARGIIRIANANMTRALRLVSTNRGYDPRDFTLMAFGGGGAMHALALAEELKVPHVVIPVNSSV FSAWGMLLTDLRRDYLQTRMAPLGPSAVPVMQQIFGELEGEALKDYSDENETLTRDDIGFEYLVDMRYAGQQHTVKVPCI GAGDGEIDLEATANAFHGAHQKRFTYRLDTGIELVNFHLIAKRTVPKPPLAPKPVTGLRLEAAIKGARRVDYDVHGVHDA TIYDGLRLEPGMHFVGPAVIQEPSVTCVVPPGHRVSIDQFGNYHIHLSFDGEA
Sequences:
>Translated_693_residues MRAATDVGGTFTDLVYYEVDPATGRSGQVKIAKVDTTPPNFEEGVVGALAKASIAPAKLDFFAHGATVVINALTERKGVR TALITTAGFRDVLEIARGNRPDLFNFAFHKPKPFVERHLRAEVVERTNYKGEIERPADLTGLPELVLKFKREGVQAIAVV FLHSYINPQNEQAVVQRLRELWPEVSILASHAVSREWREYERTSTTVLSAYVHPIAERYIGTLEAKLAEQGFTGKPYMMQ SNGGITTARAAKANPITMVESGPASGIFAAAYVGKAIGANNLIVLDIGGTTAKCTLIEEGHVKVTTEYYIERDGKNPGYP IQTPVSDIVEIGNGGGSIAWVDAGGKLHVGPHSAAARPGPAAYGRGGAKATTTDANLVLGRIDPASFVGGEREPDWKSVE AAFAPLQAALGMSREEVARGIIRIANANMTRALRLVSTNRGYDPRDFTLMAFGGGGAMHALALAEELKVPHVVIPVNSSV FSAWGMLLTDLRRDYLQTRMAPLGPSAVPVMQQIFGELEGEALKDYSDENETLTRDDIGFEYLVDMRYAGQQHTVKVPCI GAGDGEIDLEATANAFHGAHQKRFTYRLDTGIELVNFHLIAKRTVPKPPLAPKPVTGLRLEAAIKGARRVDYDVHGVHDA TIYDGLRLEPGMHFVGPAVIQEPSVTCVVPPGHRVSIDQFGNYHIHLSFDGEA >Mature_693_residues MRAATDVGGTFTDLVYYEVDPATGRSGQVKIAKVDTTPPNFEEGVVGALAKASIAPAKLDFFAHGATVVINALTERKGVR TALITTAGFRDVLEIARGNRPDLFNFAFHKPKPFVERHLRAEVVERTNYKGEIERPADLTGLPELVLKFKREGVQAIAVV FLHSYINPQNEQAVVQRLRELWPEVSILASHAVSREWREYERTSTTVLSAYVHPIAERYIGTLEAKLAEQGFTGKPYMMQ SNGGITTARAAKANPITMVESGPASGIFAAAYVGKAIGANNLIVLDIGGTTAKCTLIEEGHVKVTTEYYIERDGKNPGYP IQTPVSDIVEIGNGGGSIAWVDAGGKLHVGPHSAAARPGPAAYGRGGAKATTTDANLVLGRIDPASFVGGEREPDWKSVE AAFAPLQAALGMSREEVARGIIRIANANMTRALRLVSTNRGYDPRDFTLMAFGGGGAMHALALAEELKVPHVVIPVNSSV FSAWGMLLTDLRRDYLQTRMAPLGPSAVPVMQQIFGELEGEALKDYSDENETLTRDDIGFEYLVDMRYAGQQHTVKVPCI GAGDGEIDLEATANAFHGAHQKRFTYRLDTGIELVNFHLIAKRTVPKPPLAPKPVTGLRLEAAIKGARRVDYDVHGVHDA TIYDGLRLEPGMHFVGPAVIQEPSVTCVVPPGHRVSIDQFGNYHIHLSFDGEA
Specific function: Unknown
COG id: COG0145
COG function: function code EQ; N-methylhydantoinase A/acetone carboxylase, beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=749, Percent_Identity=29.9065420560748, Blast_Score=206, Evalue=4e-53, Organism=Caenorhabditis elegans, GI133901900, Length=745, Percent_Identity=25.503355704698, Blast_Score=171, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6322634, Length=648, Percent_Identity=29.9382716049383, Blast_Score=218, Evalue=3e-57, Organism=Drosophila melanogaster, GI45550492, Length=750, Percent_Identity=29.8666666666667, Blast_Score=233, Evalue=4e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008040 - InterPro: IPR002821 [H]
Pfam domain/function: PF05378 Hydant_A_N; PF01968 Hydantoinase_A [H]
EC number: 3.5.2.14
Molecular weight: Translated: 74955; Mature: 74955
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAATDVGGTFTDLVYYEVDPATGRSGQVKIAKVDTTPPNFEEGVVGALAKASIAPAKLD CCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHH FFAHGATVVINALTERKGVRTALITTAGFRDVLEIARGNRPDLFNFAFHKPKPFVERHLR HHHCCHHHEEEHHHHCCCCEEEEEEHHCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHH AEVVERTNYKGEIERPADLTGLPELVLKFKREGVQAIAVVFLHSYINPQNEQAVVQRLRE HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHH LWPEVSILASHAVSREWREYERTSTTVLSAYVHPIAERYIGTLEAKLAEQGFTGKPYMMQ HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE SNGGITTARAAKANPITMVESGPASGIFAAAYVGKAIGANNLIVLDIGGTTAKCTLIEEG CCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEEEEECC HVKVTTEYYIERDGKNPGYPIQTPVSDIVEIGNGGGSIAWVDAGGKLHVGPHSAAARPGP CEEEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCC AAYGRGGAKATTTDANLVLGRIDPASFVGGEREPDWKSVEAAFAPLQAALGMSREEVARG CCCCCCCCCEECCCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH IIRIANANMTRALRLVSTNRGYDPRDFTLMAFGGGGAMHALALAEELKVPHVVIPVNSSV HHHCCCCCHHHEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCHH FSAWGMLLTDLRRDYLQTRMAPLGPSAVPVMQQIFGELEGEALKDYSDENETLTRDDIGF HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEEECCCCCC EYLVDMRYAGQQHTVKVPCIGAGDGEIDLEATANAFHGAHQKRFTYRLDTGIELVNFHLI EEEEEHHCCCCCCEEEEEEEECCCCCEEEEECCHHHHCCCCCEEEEEECCCCEEEEEEEE AKRTVPKPPLAPKPVTGLRLEAAIKGARRVDYDVHGVHDATIYDGLRLEPGMHFVGPAVI EECCCCCCCCCCCCCCCCEEHHHHCCCHHCCCCCCCCCCHHEECCEEECCCCCCCCHHHC QEPSVTCVVPPGHRVSIDQFGNYHIHLSFDGEA CCCCEEEEECCCCEEEHCCCCCEEEEEEECCCC >Mature Secondary Structure MRAATDVGGTFTDLVYYEVDPATGRSGQVKIAKVDTTPPNFEEGVVGALAKASIAPAKLD CCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHH FFAHGATVVINALTERKGVRTALITTAGFRDVLEIARGNRPDLFNFAFHKPKPFVERHLR HHHCCHHHEEEHHHHCCCCEEEEEEHHCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHH AEVVERTNYKGEIERPADLTGLPELVLKFKREGVQAIAVVFLHSYINPQNEQAVVQRLRE HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHH LWPEVSILASHAVSREWREYERTSTTVLSAYVHPIAERYIGTLEAKLAEQGFTGKPYMMQ HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE SNGGITTARAAKANPITMVESGPASGIFAAAYVGKAIGANNLIVLDIGGTTAKCTLIEEG CCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEEEEECC HVKVTTEYYIERDGKNPGYPIQTPVSDIVEIGNGGGSIAWVDAGGKLHVGPHSAAARPGP CEEEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCEEEECCCCCCCCCCC AAYGRGGAKATTTDANLVLGRIDPASFVGGEREPDWKSVEAAFAPLQAALGMSREEVARG CCCCCCCCCEECCCCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH IIRIANANMTRALRLVSTNRGYDPRDFTLMAFGGGGAMHALALAEELKVPHVVIPVNSSV HHHCCCCCHHHEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCHH FSAWGMLLTDLRRDYLQTRMAPLGPSAVPVMQQIFGELEGEALKDYSDENETLTRDDIGF HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCEEECCCCCC EYLVDMRYAGQQHTVKVPCIGAGDGEIDLEATANAFHGAHQKRFTYRLDTGIELVNFHLI EEEEEHHCCCCCCEEEEEEEECCCCCEEEEECCHHHHCCCCCEEEEEECCCCEEEEEEEE AKRTVPKPPLAPKPVTGLRLEAAIKGARRVDYDVHGVHDATIYDGLRLEPGMHFVGPAVI EECCCCCCCCCCCCCCCCEEHHHHCCCHHCCCCCCCCCCHHEECCEEECCCCCCCCHHHC QEPSVTCVVPPGHRVSIDQFGNYHIHLSFDGEA CCCCEEEEECCCCEEEHCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]