| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105897
Identifier: 197105897
GI number: 197105897
Start: 2781732
End: 2783402
Strand: Reverse
Name: 197105897
Synonym: PHZ_c2436
Alternate gene names: NA
Gene position: 2783402-2781732 (Counterclockwise)
Preceding gene: 197105898
Following gene: 197105896
Centisome position: 69.65
GC content: 64.45
Gene sequence:
>1671_bases GTGTCGTCAAACCTTTTCACGCTCGAGATCATCAAGGATTCGCTGGTGGCGGTCGGCGAAGAGATGTTCAACGCCATGCT GCGGACCAGCATGAGCCCGATCATCTATGAGGGCACGGATTTCGCGGTCGGGGCGACGGACGCCAGAGGCAATCTGCTAG CGCAGGGTAACGGCGTAGCCGCATTCCTGGCAGCCCTCGACACCGCCGTTGTCTCGGCGCTCGAGCACTACGATCCGAGC GAGATTCGTCCCGGCGACGTGTTCATCACCAACACCCCCTACGAGGGCGGCGGCACGCACCTGTCTGACGTGGCGATCCT CATCCCCGTGTTCCATGAGGGCCGGCTGATCGCCTGGACGGTGAACAAGGCCCATTGGACCGAAGTGGGCGGGGCGCAGC CAGGCAGCGTGTCCAGTTCATCGACCGACATCTACCAGGAGGGCCTGCGCTTCACCTTCATCAAGCTCTACGACGAAGGA CGGCTGAACCAGCCGGTCGTGCAGATCATCCGGGACAACGTCCGGCTTCCGGACTCGACCATCGGCGACATGCATGCCGG GGTGGCGGCAGCGCGTGTCGGCGAAAAGCGGATCCTCGAACTCGTCGCCAGGTACGGCGCCGAGATGGTTCTCCAGGCGA TGGATGAGCTGCTGGACTACGGGGAAAAAATGACCAGGGCCGCGCTGGCGACGATCCCGAGCGGCGTCTACGAAGCCGAG GACATCATCGAGGAGGATGGTCTCGGAAACGGTCCCTTCAAGGTGAGGGTGAAGGTGACGGTCACCGGCGATCGTCTTGT CGCCGACTTCACCGGCTCGTCGCCCCAGGCGCCGGGGCCTGTGAACACGACCTACTCGGGTCTGATGACCGGAGCGCGCT GCCTTTTCAAGGCGATCACTGACCCGGGCATTCCGGCCAACGGCGGCTGTTTTCGAATGCTTGAGGTGGTCTGTCCGCCA GGGACGGTTCTCACCGCCATCGAACCGGCTCCGGTTTCGATGAACTTTCAGGCGCGAAACGCCGCCGTCGACGTCATGTG GAAGGCGCTGGCCCCCATTCTCCCGCACCGTCTGCCGGCGGGTCACCAGCAGTCGGTCTGCGCCACCTTCATCTCTGGCA AGCATCCTGACACGGGGGAGCTCTTCGTGATCGGCGAGCCCCTGGTCGGCGGCTGGGGAGCCTCCCAGGACACCGATGGC GACGCCGGCCAGTTCTGCAGCTCCAATGGCGAGACCTACAACATCCCCTGCGAGCTGTTCGAAGCGCGCTACGGGCTTCA GGTCGCCCAATACGCCTTCCACGATCAGGACGGCGGCGCCGGACGCTACCGGGGCGGGAAGGGGGTCGTGCTCGATTATC GCGTTACCGCCGAGCGTGCGTTTCTCACCTATGCCGCAGCCCGAACGTCATCTCGGCCCTGGGCCCTTCTGGGAGGTCAG GAAGGCTCAAACAACTACGCGGAGATCCGTCGCCACGACGGATCGGTGGAACGCTACGGGATGTGCACGACCGTTCCGGT CGAGCGCGACGAGATCATCCGCATCTACACGGCCACGGGCGGCGGCTACGGAGATCCCAGGACCAGGCCGCGGGAGCTCG TGGAACAGGATATGAAGAACGGCTTCGTAACGCCCCAGCAGGCCGCCGAGCACTACGGCTATCGGCCCTGA
Upstream 100 bases:
>100_bases GCCCTCGGTCACCTGCGTGGTGCCGCCCGGGCATCGCGTCAGCATCGACCAGTTCGGAAACTATCACATCCACCTGTCCT TCGACGGGGAGGCCTAACCC
Downstream 100 bases:
>100_bases CGCAGCCGCGGTTAAGGCCGCGCGCCACCCTTCTCACAACACTCCTGCAGCGGCCCCGTCACTGCAGTGGAGGTTCGCGT CCTCATCCCTGGCTTCGATC
Product: 5-oxoprolinase (ATP-hydrolyzing)
Products: ADP; phosphate; N-carbamoylsarcosine
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MSSNLFTLEIIKDSLVAVGEEMFNAMLRTSMSPIIYEGTDFAVGATDARGNLLAQGNGVAAFLAALDTAVVSALEHYDPS EIRPGDVFITNTPYEGGGTHLSDVAILIPVFHEGRLIAWTVNKAHWTEVGGAQPGSVSSSSTDIYQEGLRFTFIKLYDEG RLNQPVVQIIRDNVRLPDSTIGDMHAGVAAARVGEKRILELVARYGAEMVLQAMDELLDYGEKMTRAALATIPSGVYEAE DIIEEDGLGNGPFKVRVKVTVTGDRLVADFTGSSPQAPGPVNTTYSGLMTGARCLFKAITDPGIPANGGCFRMLEVVCPP GTVLTAIEPAPVSMNFQARNAAVDVMWKALAPILPHRLPAGHQQSVCATFISGKHPDTGELFVIGEPLVGGWGASQDTDG DAGQFCSSNGETYNIPCELFEARYGLQVAQYAFHDQDGGAGRYRGGKGVVLDYRVTAERAFLTYAAARTSSRPWALLGGQ EGSNNYAEIRRHDGSVERYGMCTTVPVERDEIIRIYTATGGGYGDPRTRPRELVEQDMKNGFVTPQQAAEHYGYRP
Sequences:
>Translated_556_residues MSSNLFTLEIIKDSLVAVGEEMFNAMLRTSMSPIIYEGTDFAVGATDARGNLLAQGNGVAAFLAALDTAVVSALEHYDPS EIRPGDVFITNTPYEGGGTHLSDVAILIPVFHEGRLIAWTVNKAHWTEVGGAQPGSVSSSSTDIYQEGLRFTFIKLYDEG RLNQPVVQIIRDNVRLPDSTIGDMHAGVAAARVGEKRILELVARYGAEMVLQAMDELLDYGEKMTRAALATIPSGVYEAE DIIEEDGLGNGPFKVRVKVTVTGDRLVADFTGSSPQAPGPVNTTYSGLMTGARCLFKAITDPGIPANGGCFRMLEVVCPP GTVLTAIEPAPVSMNFQARNAAVDVMWKALAPILPHRLPAGHQQSVCATFISGKHPDTGELFVIGEPLVGGWGASQDTDG DAGQFCSSNGETYNIPCELFEARYGLQVAQYAFHDQDGGAGRYRGGKGVVLDYRVTAERAFLTYAAARTSSRPWALLGGQ EGSNNYAEIRRHDGSVERYGMCTTVPVERDEIIRIYTATGGGYGDPRTRPRELVEQDMKNGFVTPQQAAEHYGYRP >Mature_555_residues SSNLFTLEIIKDSLVAVGEEMFNAMLRTSMSPIIYEGTDFAVGATDARGNLLAQGNGVAAFLAALDTAVVSALEHYDPSE IRPGDVFITNTPYEGGGTHLSDVAILIPVFHEGRLIAWTVNKAHWTEVGGAQPGSVSSSSTDIYQEGLRFTFIKLYDEGR LNQPVVQIIRDNVRLPDSTIGDMHAGVAAARVGEKRILELVARYGAEMVLQAMDELLDYGEKMTRAALATIPSGVYEAED IIEEDGLGNGPFKVRVKVTVTGDRLVADFTGSSPQAPGPVNTTYSGLMTGARCLFKAITDPGIPANGGCFRMLEVVCPPG TVLTAIEPAPVSMNFQARNAAVDVMWKALAPILPHRLPAGHQQSVCATFISGKHPDTGELFVIGEPLVGGWGASQDTDGD AGQFCSSNGETYNIPCELFEARYGLQVAQYAFHDQDGGAGRYRGGKGVVLDYRVTAERAFLTYAAARTSSRPWALLGGQE GSNNYAEIRRHDGSVERYGMCTTVPVERDEIIRIYTATGGGYGDPRTRPRELVEQDMKNGFVTPQQAAEHYGYRP
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=539, Percent_Identity=28.2003710575139, Blast_Score=166, Evalue=8e-41, Organism=Caenorhabditis elegans, GI133901900, Length=535, Percent_Identity=26.1682242990654, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI133901902, Length=508, Percent_Identity=25.9842519685039, Blast_Score=160, Evalue=1e-39, Organism=Saccharomyces cerevisiae, GI6322634, Length=554, Percent_Identity=26.8953068592058, Blast_Score=162, Evalue=2e-40, Organism=Drosophila melanogaster, GI45550492, Length=586, Percent_Identity=25.938566552901, Blast_Score=142, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: 3.5.2.14
Molecular weight: Translated: 59888; Mature: 59757
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNLFTLEIIKDSLVAVGEEMFNAMLRTSMSPIIYEGTDFAVGATDARGNLLAQGNGVA CCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCCCCCEEECCCCHH AFLAALDTAVVSALEHYDPSEIRPGDVFITNTPYEGGGTHLSDVAILIPVFHEGRLIAWT HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHCEEEEEEEECCCEEEEEE VNKAHWTEVGGAQPGSVSSSSTDIYQEGLRFTFIKLYDEGRLNQPVVQIIRDNVRLPDST ECCCEEEECCCCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCC IGDMHAGVAAARVGEKRILELVARYGAEMVLQAMDELLDYGEKMTRAALATIPSGVYEAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH DIIEEDGLGNGPFKVRVKVTVTGDRLVADFTGSSPQAPGPVNTTYSGLMTGARCLFKAIT HHHHHCCCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHC DPGIPANGGCFRMLEVVCPPGTVLTAIEPAPVSMNFQARNAAVDVMWKALAPILPHRLPA CCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCC GHQQSVCATFISGKHPDTGELFVIGEPLVGGWGASQDTDGDAGQFCSSNGETYNIPCELF CCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEECCHHHH EARYGLQVAQYAFHDQDGGAGRYRGGKGVVLDYRVTAERAFLTYAAARTSSRPWALLGGQ HHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCEEEECCC EGSNNYAEIRRHDGSVERYGMCTTVPVERDEIIRIYTATGGGYGDPRTRPRELVEQDMKN CCCCCHHHHHHCCCCCHHCCCEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHC GFVTPQQAAEHYGYRP CCCCHHHHHHHCCCCC >Mature Secondary Structure SSNLFTLEIIKDSLVAVGEEMFNAMLRTSMSPIIYEGTDFAVGATDARGNLLAQGNGVA CCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEECCCCCCCEEECCCCHH AFLAALDTAVVSALEHYDPSEIRPGDVFITNTPYEGGGTHLSDVAILIPVFHEGRLIAWT HHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHCEEEEEEEECCCEEEEEE VNKAHWTEVGGAQPGSVSSSSTDIYQEGLRFTFIKLYDEGRLNQPVVQIIRDNVRLPDST ECCCEEEECCCCCCCCCCCCCHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCCC IGDMHAGVAAARVGEKRILELVARYGAEMVLQAMDELLDYGEKMTRAALATIPSGVYEAE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH DIIEEDGLGNGPFKVRVKVTVTGDRLVADFTGSSPQAPGPVNTTYSGLMTGARCLFKAIT HHHHHCCCCCCCEEEEEEEEEECCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHC DPGIPANGGCFRMLEVVCPPGTVLTAIEPAPVSMNFQARNAAVDVMWKALAPILPHRLPA CCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCC GHQQSVCATFISGKHPDTGELFVIGEPLVGGWGASQDTDGDAGQFCSSNGETYNIPCELF CCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEECCHHHH EARYGLQVAQYAFHDQDGGAGRYRGGKGVVLDYRVTAERAFLTYAAARTSSRPWALLGGQ HHHHCCHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCCEEEECCC EGSNNYAEIRRHDGSVERYGMCTTVPVERDEIIRIYTATGGGYGDPRTRPRELVEQDMKN CCCCCHHHHHHCCCCCHHCCCEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHC GFVTPQQAAEHYGYRP CCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; N-methylimidazolidine-2,4-dione; H2O
Specific reaction: ATP + N-methylimidazolidine-2,4-dione + 2 H2O = ADP + phosphate + N-carbamoylsarcosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]