| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105896
Identifier: 197105896
GI number: 197105896
Start: 2780137
End: 2781372
Strand: Reverse
Name: 197105896
Synonym: PHZ_c2435
Alternate gene names: NA
Gene position: 2781372-2780137 (Counterclockwise)
Preceding gene: 197105897
Following gene: 197105895
Centisome position: 69.6
GC content: 65.86
Gene sequence:
>1236_bases ATGCACCTTCGCAAGTTGCCCGGCGTTCGTCCGCCGGCGCGCGCGCTGCAGGCTGTCCTCGTCGCGAGCGACACTCAGCT TATGGCAACGGCCAGGTTGCTGAGAGAACGCGCTAAGATCGAGGCCACGGGCGGAGCGCGCTATCTCACGTGGCGCGAGG GACAGATGAGTGTCGCGTGGGAGCGGCACACGGAGTTCATGACGCTCACGTTCCTTTGGGAGGGGGCCGGGCGAAACTTC GAGTTCGAGGGCGTCGAGGCCGCCCTCGAACTTCTTCTCACCCTTCCCGGCGAGGTGCTGCGGGCCAGCAAGATCCACAT CCTTGGACCTGACTGCGCGACGCCAGCAGACGCCGATCTTGGCCAGCTGTTCTCAGCCGATGATCTGGTGATTTGTGACG TCGCCGACGGACGTGCACGGATCTGGTCTGACTTCCGTTTGCACGATGACGGCTTTGGACGGCTGCTGATTGCGGATCGC GGGCTGCAGAAAGGTGAGCCAGCCCTGCTCCTGCAGCGGCTTCAGGAGCTCGGCAACTATCGGAAGATGGCTCTCATCGG CCTTCCGGTGGCGCAGGCCGCAAACCCCGCGGTCGCCGAGCTCGAGCAGCGCCTTGCCGATCTGACGAAGGAAATGTCGG TCGGTTCGGCGACCGACGACACGATCCTGGCCGACCTTCTGGAGCTAAGCGCCGACCTTGCGCGGCTCAGCGCCGAGACG CGACACAGAATGAGCGCCACCCGCGCTTACGCGCAGCTCTGCGCGGAGCGATTGCGGCAACTGCGAGTAAGTCCGGTCGC TGGCTATCGGTCGCTGGAGGACTTCACGGAGCGCCGCCTCTCGCCAGCGGCGCGCACCTGCGCGGCGTTCACCGTCCGAC TGGATGACCTGTCGCGCCAGGCCGGTTGGGCGAGCGCCCTGTTGCGGACGCGGATCGACACGCGACTGGCAGGTCAGCAG CGAGACCTTCTCGCCTCGATGGACCGGCGAACGGATCTTCAGTTGCGGCTTCAGCACATGGTCGAATGGGTTTCGGCGGC CGCTGTCGCCTACTACCTCGTCGGGCTGTTGCATTACGCTGTGGCGCCCTTCGATCACGTGGCGGGGCTGCAGCAGGAGA CGGTGCTGGCCCTTGCCTCGCCGGCGGCCCTCGTTGCGGTCGTTCTCGTCATGCACGCCTTCGCCCGCCGGTTCCGCAGG CCGGCGAACGGCTCTTCGAAAGCAGGAAACAGTTGA
Upstream 100 bases:
>100_bases CGGCTTCCGACTTCAGATGGCGCTTTTTCCGACCGATCGGCGAGCTGGCATGGCGTTGCAGGCGCGCAGCCATCCACGGC GCGCCTCCCTGTCCGAGGAG
Downstream 100 bases:
>100_bases TGCAAGCCCAAGGACTTTACGCCGGTCCTGTCTTCGACATGGCGCGGAGCCAGTTCGAGCAGGTCGCGGATCATCTCGGC ATCGCCTCCGATGAGCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MHLRKLPGVRPPARALQAVLVASDTQLMATARLLRERAKIEATGGARYLTWREGQMSVAWERHTEFMTLTFLWEGAGRNF EFEGVEAALELLLTLPGEVLRASKIHILGPDCATPADADLGQLFSADDLVICDVADGRARIWSDFRLHDDGFGRLLIADR GLQKGEPALLLQRLQELGNYRKMALIGLPVAQAANPAVAELEQRLADLTKEMSVGSATDDTILADLLELSADLARLSAET RHRMSATRAYAQLCAERLRQLRVSPVAGYRSLEDFTERRLSPAARTCAAFTVRLDDLSRQAGWASALLRTRIDTRLAGQQ RDLLASMDRRTDLQLRLQHMVEWVSAAAVAYYLVGLLHYAVAPFDHVAGLQQETVLALASPAALVAVVLVMHAFARRFRR PANGSSKAGNS
Sequences:
>Translated_411_residues MHLRKLPGVRPPARALQAVLVASDTQLMATARLLRERAKIEATGGARYLTWREGQMSVAWERHTEFMTLTFLWEGAGRNF EFEGVEAALELLLTLPGEVLRASKIHILGPDCATPADADLGQLFSADDLVICDVADGRARIWSDFRLHDDGFGRLLIADR GLQKGEPALLLQRLQELGNYRKMALIGLPVAQAANPAVAELEQRLADLTKEMSVGSATDDTILADLLELSADLARLSAET RHRMSATRAYAQLCAERLRQLRVSPVAGYRSLEDFTERRLSPAARTCAAFTVRLDDLSRQAGWASALLRTRIDTRLAGQQ RDLLASMDRRTDLQLRLQHMVEWVSAAAVAYYLVGLLHYAVAPFDHVAGLQQETVLALASPAALVAVVLVMHAFARRFRR PANGSSKAGNS >Mature_411_residues MHLRKLPGVRPPARALQAVLVASDTQLMATARLLRERAKIEATGGARYLTWREGQMSVAWERHTEFMTLTFLWEGAGRNF EFEGVEAALELLLTLPGEVLRASKIHILGPDCATPADADLGQLFSADDLVICDVADGRARIWSDFRLHDDGFGRLLIADR GLQKGEPALLLQRLQELGNYRKMALIGLPVAQAANPAVAELEQRLADLTKEMSVGSATDDTILADLLELSADLARLSAET RHRMSATRAYAQLCAERLRQLRVSPVAGYRSLEDFTERRLSPAARTCAAFTVRLDDLSRQAGWASALLRTRIDTRLAGQQ RDLLASMDRRTDLQLRLQHMVEWVSAAAVAYYLVGLLHYAVAPFDHVAGLQQETVLALASPAALVAVVLVMHAFARRFRR PANGSSKAGNS
Specific function: Unknown
COG id: COG4949
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45253; Mature: 45253
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLRKLPGVRPPARALQAVLVASDTQLMATARLLRERAKIEATGGARYLTWREGQMSVAW CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEECCCEEEEEEECCCEEEHH ERHTEFMTLTFLWEGAGRNFEFEGVEAALELLLTLPGEVLRASKIHILGPDCATPADADL HHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHCCCEEEECCCCCCCCCCCH GQLFSADDLVICDVADGRARIWSDFRLHDDGFGRLLIADRGLQKGEPALLLQRLQELGNY HHHCCCCCEEEEECCCCCHHHHHCCEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCH RKMALIGLPVAQAANPAVAELEQRLADLTKEMSVGSATDDTILADLLELSADLARLSAET HEEHEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH RHRMSATRAYAQLCAERLRQLRVSPVAGYRSLEDFTERRLSPAARTCAAFTVRLDDLSRQ HHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHCCHHHHHHHHHEEEHHHHHHH AGWASALLRTRIDTRLAGQQRDLLASMDRRTDLQLRLQHMVEWVSAAAVAYYLVGLLHYA HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAPFDHVAGLQQETVLALASPAALVAVVLVMHAFARRFRRPANGSSKAGNS HCCHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MHLRKLPGVRPPARALQAVLVASDTQLMATARLLRERAKIEATGGARYLTWREGQMSVAW CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCEEECCCEEEEEEECCCEEEHH ERHTEFMTLTFLWEGAGRNFEFEGVEAALELLLTLPGEVLRASKIHILGPDCATPADADL HHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHCCCEEEECCCCCCCCCCCH GQLFSADDLVICDVADGRARIWSDFRLHDDGFGRLLIADRGLQKGEPALLLQRLQELGNY HHHCCCCCEEEEECCCCCHHHHHCCEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCH RKMALIGLPVAQAANPAVAELEQRLADLTKEMSVGSATDDTILADLLELSADLARLSAET HEEHEEECCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH RHRMSATRAYAQLCAERLRQLRVSPVAGYRSLEDFTERRLSPAARTCAAFTVRLDDLSRQ HHHHHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHCCHHHHHHHHHEEEHHHHHHH AGWASALLRTRIDTRLAGQQRDLLASMDRRTDLQLRLQHMVEWVSAAAVAYYLVGLLHYA HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAPFDHVAGLQQETVLALASPAALVAVVLVMHAFARRFRRPANGSSKAGNS HCCHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA