| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is exoM [H]
Identifier: 197104616
GI number: 197104616
Start: 1319550
End: 1320452
Strand: Reverse
Name: exoM [H]
Synonym: PHZ_c1150
Alternate gene names: 197104616
Gene position: 1320452-1319550 (Counterclockwise)
Preceding gene: 197104619
Following gene: 197104615
Centisome position: 33.04
GC content: 75.08
Gene sequence:
>903_bases TTGGCCGCCACGACCGTCGACGTCGCCGTCTGCACCTACCGCCGCCCGGCCGTGGCCGAGACCCTGGCCTCGATCGCCCG CCAGGCCCTGGCGCCGGACGTCCGCGTCCGCGTGATCGTCGCCGACAACGACGAACAGCCCGAGGCCCGCGCGCGGGTTC TGGCCGCGGCGAAGGCGCTGGCACTGGAGGTGGCCTACGTGCATGCCCCCGCGCGCAACATCTCCCTGGCGCGCAACGCC TGCCTCGAGGCGGCGGAGGCGCCCTTCCTCGCCTTCATCGACGACGACGAGACCGCCTCGGAAGGCTGGCTCGCCGCCCT CCTCGCCGAGGCGGAGGCCGGCGGCTGGGATGCGGTGCTGGGGCCGGTCCGCGCGGTCTACGGCCCGCAGGCGCCGCCGT GGATGGCGGCCGGCGACTTCCACTCCACGCGTCCGGTGCAGGCGGGCGGGCGGATCCTGAAGGGCTATGCCGGCAATGTG CTCGTTCGGCGGGAGACGGTCGAGCGTCTTGGCCTCAGGTTCGATCTCGCGCTGGGCCGTCAGGGCGGCGAGGACGACGA CTTCTTCTACCGGCTGACCGACGCCGGCGGGACGATCGGCTACGCCCCAGACGCCCTGGCCTTCGAACCGGTGCCCGAGC AGCGGGCCTCGCTGAAGTGGCTGCTCAAGCGCAGCTTCCGCACCGGCCAGACCCATGGCTCGCGCCTGCGCCGTCGCTCT CCGGGCGCCGCGGGGCGGCTGGTCCAGTCGGGCCTGGCGGCGGCCAAGGGAGGCGTGTGCCTGGCCGGCGCGGCGGCCAG CGCCTTTTCTCCGGCCCGCCGCGGGCGCTGGCTGGTTCGGGGGGCGCTCCACGCCGGCGTCGTGGCCAGGCTCGCCGGCT GGCGCGAGCTCCAACTCTACTGA
Upstream 100 bases:
>100_bases TTCCGCCGTAGCCGGCGGGCCAGTGCAGCGATGGCGGAAACGTGATCGGGGAACCGGCCGCGCCCGGCGGCATTCCGGCG GCGAAGCTTGGAGGGGAGCC
Downstream 100 bases:
>100_bases TCCTGGCGGCGGCCGGGGAACGGCCGCGAGCCCCCGCGAGTTGATGGGCGCGGATGTGCGCCCGGCGCGCATTCGAAATC GTCTGGTCGCGATTCCACGG
Product: glycosyl transferase, group 2 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MAATTVDVAVCTYRRPAVAETLASIARQALAPDVRVRVIVADNDEQPEARARVLAAAKALALEVAYVHAPARNISLARNA CLEAAEAPFLAFIDDDETASEGWLAALLAEAEAGGWDAVLGPVRAVYGPQAPPWMAAGDFHSTRPVQAGGRILKGYAGNV LVRRETVERLGLRFDLALGRQGGEDDDFFYRLTDAGGTIGYAPDALAFEPVPEQRASLKWLLKRSFRTGQTHGSRLRRRS PGAAGRLVQSGLAAAKGGVCLAGAAASAFSPARRGRWLVRGALHAGVVARLAGWRELQLY
Sequences:
>Translated_300_residues MAATTVDVAVCTYRRPAVAETLASIARQALAPDVRVRVIVADNDEQPEARARVLAAAKALALEVAYVHAPARNISLARNA CLEAAEAPFLAFIDDDETASEGWLAALLAEAEAGGWDAVLGPVRAVYGPQAPPWMAAGDFHSTRPVQAGGRILKGYAGNV LVRRETVERLGLRFDLALGRQGGEDDDFFYRLTDAGGTIGYAPDALAFEPVPEQRASLKWLLKRSFRTGQTHGSRLRRRS PGAAGRLVQSGLAAAKGGVCLAGAAASAFSPARRGRWLVRGALHAGVVARLAGWRELQLY >Mature_299_residues AATTVDVAVCTYRRPAVAETLASIARQALAPDVRVRVIVADNDEQPEARARVLAAAKALALEVAYVHAPARNISLARNAC LEAAEAPFLAFIDDDETASEGWLAALLAEAEAGGWDAVLGPVRAVYGPQAPPWMAAGDFHSTRPVQAGGRILKGYAGNVL VRRETVERLGLRFDLALGRQGGEDDDFFYRLTDAGGTIGYAPDALAFEPVPEQRASLKWLLKRSFRTGQTHGSRLRRRSP GAAGRLVQSGLAAAKGGVCLAGAAASAFSPARRGRWLVRGALHAGVVARLAGWRELQLY
Specific function: Glycosyltransferase required for the synthesis of succinoglycan (EPS I). Needed for the addition of the fourth sugar (glucose), catalyzes the formation of a beta-1,4 linkage between the third acetylated sugar and the fourth sugar [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 31889; Mature: 31757
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATTVDVAVCTYRRPAVAETLASIARQALAPDVRVRVIVADNDEQPEARARVLAAAKAL CCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH ALEVAYVHAPARNISLARNACLEAAEAPFLAFIDDDETASEGWLAALLAEAEAGGWDAVL HHEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHH GPVRAVYGPQAPPWMAAGDFHSTRPVQAGGRILKGYAGNVLVRRETVERLGLRFDLALGR HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHCCEEEEEECC QGGEDDDFFYRLTDAGGTIGYAPDALAFEPVPEQRASLKWLLKRSFRTGQTHGSRLRRRS CCCCCCCEEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCC PGAAGRLVQSGLAAAKGGVCLAGAAASAFSPARRGRWLVRGALHAGVVARLAGWRELQLY CCHHHHHHHHHHHHHCCCEEEECCCHHHCCHHHCCCCHHHHHHHHHHHHHHCCCEEEEEC >Mature Secondary Structure AATTVDVAVCTYRRPAVAETLASIARQALAPDVRVRVIVADNDEQPEARARVLAAAKAL CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH ALEVAYVHAPARNISLARNACLEAAEAPFLAFIDDDETASEGWLAALLAEAEAGGWDAVL HHEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHH GPVRAVYGPQAPPWMAAGDFHSTRPVQAGGRILKGYAGNVLVRRETVERLGLRFDLALGR HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEHHHHHHHCCEEEEEECC QGGEDDDFFYRLTDAGGTIGYAPDALAFEPVPEQRASLKWLLKRSFRTGQTHGSRLRRRS CCCCCCCEEEEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCC PGAAGRLVQSGLAAAKGGVCLAGAAASAFSPARRGRWLVRGALHAGVVARLAGWRELQLY CCHHHHHHHHHHHHHCCCEEEECCCHHHCCHHHCCCCHHHHHHHHHHHHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8226645; 8246891; 11481431 [H]