| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is proP [H]
Identifier: 197103755
GI number: 197103755
Start: 281711
End: 283387
Strand: Reverse
Name: proP [H]
Synonym: PHZ_c0289
Alternate gene names: 197103755
Gene position: 283387-281711 (Counterclockwise)
Preceding gene: 197103756
Following gene: 197103751
Centisome position: 7.09
GC content: 70.9
Gene sequence:
>1677_bases ATGGCGGACGCGACCGCTGAGCGGGCCGGCGCGCCGGCGAAGGAAACCTCGCTGCGGACGGTCGTCGCCGCCTCGTCGGC GGGCACGGCCTTCGAGTGGTACGACTTCTTCGTCTTCGGCAGCCTGGCCGGTGTCATCTCGCGCACCTTCTTCACCGGCC TGCCCGAGACGGCGGGCCTGGCCGCGGCCCTGGCCCTGTTCGGCGCGGGCTTCCTGTTCCGCCCCCTGGGAGCCCTGGTG TTCGGCCGGATCGGCGACAAGGCCGGCCGCAAGGGCGCGTTCCTGGCCACGGTGCTGCTGATGGGCGGGGCCACCTTCGC CATCGGCCTGCTGCCCTCGTACGAGCAGGCCGGCCTGATCGGCCCGGCCCTGTTGATCCTGATGCGCATCCTGCAGGGCT TCGCGCTGGGCGGCGAATACGGCGGGGCGGCGATCTACGTGGCCGAGCACGCGCCGCCGAACGGCCGCGGCTGGGCGACG AGCTGGGTGCAGACCTCGGCGGCGCTGGGCCTGTTCGGGGCCCTGCTGGTGATCCTGGCCACCCGCTTGATCCTGGGCGA ATTCGTCGGCGCCGAGGCCTTCGACGCCTGGGGCTGGCGCATCCCCTTCCTGTTCTCGGCGGGCCTGCTGGCCATCTCGG TCTGGATGCGCCTGAAGCTCTCGGAGAGCCCGGCGTTCCAGAAGCTGAAGGACGAGGGCAACGTCCCGCACGCCCCGTTC GCCGAGGCGTTCGGCCGCTGGGACAACCTGAAGATCGTGCTCCTGGCCCTGTTCGCCATCATGTCGGCCCAGGGCGCGGT CTGGTACACGGCCTTCTTCTACGTCCAGACGTTCATGGAGCGGTTCCTGAAGGCGCCGCCCGAGACGATCACCGCCCTGA TGCTCTCGGCCACCGCGATCAGCGCGGTGCTCTACGTCTTCTTCGGCTGGCTGTCGGACCGGGTCGGGCGCAAGCCGGTG ATGCTGTTCGGCATGACGCTGATGCTGGCGGCCTACTTCCCCGGCTTCCACCTCCTGTCCAAGACCCTGAACCCGGCGCT CGCCGAAGCCGAGGCCACGACGCCGGTGGTGGTGATCGCCGACCCCGCCGACTGCTCTTTGCAGTTCGATCCCGTCGGCA AGGCCTCGTTCGCCTCGTCGTGCGACATCGCCAAGAACGCCCTGGCCAACGCCGGCGTCTCGTACCGCAACGAGGCGGGC CCCGCCGGCCAGCCGGCGATGGTGCGGGTGGGCATGGCGACCATCGTCTCGGCCGACGCGCGCGGGCTCGCGCCCGAGGC GACCAAGGCGGTGCGCGCCAGCGTCGAGGGCCGCATCCGGCAGGCCCTGGCCCGCGCCGGCTACCCTGAGAAGGCCGACC CCGCGCGGCTGAACTTCTGGGGCGCGCTGGGGGTGATGGCGGTGTTCGTGATCGCCGCGACCGCGCTCTACGGCCCCATG GCCGCCTGCCTGGTCGAGCTGTTCCCGACCCGCATCCGCTATACGGCCCTATCGCTGCCCTACCACATCGGCACCGGCTG GATCGGCGGCTTCGTCCCCTTCAGCGCCTTCGCAATCGTGACGGCGGTGGGCGACATCTACTCGGGCCTGTGGTTCCCCT TCGCCTTCACGGCGCTGTCGGTCGTGATCTGCTTCCTGTTCCTGAAGGAGACCAGGGGCCGGCCGCTGGACGCCTAG
Upstream 100 bases:
>100_bases GGCCTGACCCCTCGCGCGCCGATCCGCCCCGACGCCTTCCACCCGTCGGCGAACCGGTGTTACAGCAGGCGCAACGACAC CTTGGGGGGAGATGACGGGC
Downstream 100 bases:
>100_bases CCCCCTTCTCCCCCTTGCGGGGGAAGGATCACCGCTTCCCGTCCAGCTCGGCGAGGGTGGCGCTGGAGGGCGGCCGCTCG GCCTGCAGGCGCCGCGCGAC
Product: permease of the major facilitator superfamily
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MADATAERAGAPAKETSLRTVVAASSAGTAFEWYDFFVFGSLAGVISRTFFTGLPETAGLAAALALFGAGFLFRPLGALV FGRIGDKAGRKGAFLATVLLMGGATFAIGLLPSYEQAGLIGPALLILMRILQGFALGGEYGGAAIYVAEHAPPNGRGWAT SWVQTSAALGLFGALLVILATRLILGEFVGAEAFDAWGWRIPFLFSAGLLAISVWMRLKLSESPAFQKLKDEGNVPHAPF AEAFGRWDNLKIVLLALFAIMSAQGAVWYTAFFYVQTFMERFLKAPPETITALMLSATAISAVLYVFFGWLSDRVGRKPV MLFGMTLMLAAYFPGFHLLSKTLNPALAEAEATTPVVVIADPADCSLQFDPVGKASFASSCDIAKNALANAGVSYRNEAG PAGQPAMVRVGMATIVSADARGLAPEATKAVRASVEGRIRQALARAGYPEKADPARLNFWGALGVMAVFVIAATALYGPM AACLVELFPTRIRYTALSLPYHIGTGWIGGFVPFSAFAIVTAVGDIYSGLWFPFAFTALSVVICFLFLKETRGRPLDA
Sequences:
>Translated_558_residues MADATAERAGAPAKETSLRTVVAASSAGTAFEWYDFFVFGSLAGVISRTFFTGLPETAGLAAALALFGAGFLFRPLGALV FGRIGDKAGRKGAFLATVLLMGGATFAIGLLPSYEQAGLIGPALLILMRILQGFALGGEYGGAAIYVAEHAPPNGRGWAT SWVQTSAALGLFGALLVILATRLILGEFVGAEAFDAWGWRIPFLFSAGLLAISVWMRLKLSESPAFQKLKDEGNVPHAPF AEAFGRWDNLKIVLLALFAIMSAQGAVWYTAFFYVQTFMERFLKAPPETITALMLSATAISAVLYVFFGWLSDRVGRKPV MLFGMTLMLAAYFPGFHLLSKTLNPALAEAEATTPVVVIADPADCSLQFDPVGKASFASSCDIAKNALANAGVSYRNEAG PAGQPAMVRVGMATIVSADARGLAPEATKAVRASVEGRIRQALARAGYPEKADPARLNFWGALGVMAVFVIAATALYGPM AACLVELFPTRIRYTALSLPYHIGTGWIGGFVPFSAFAIVTAVGDIYSGLWFPFAFTALSVVICFLFLKETRGRPLDA >Mature_557_residues ADATAERAGAPAKETSLRTVVAASSAGTAFEWYDFFVFGSLAGVISRTFFTGLPETAGLAAALALFGAGFLFRPLGALVF GRIGDKAGRKGAFLATVLLMGGATFAIGLLPSYEQAGLIGPALLILMRILQGFALGGEYGGAAIYVAEHAPPNGRGWATS WVQTSAALGLFGALLVILATRLILGEFVGAEAFDAWGWRIPFLFSAGLLAISVWMRLKLSESPAFQKLKDEGNVPHAPFA EAFGRWDNLKIVLLALFAIMSAQGAVWYTAFFYVQTFMERFLKAPPETITALMLSATAISAVLYVFFGWLSDRVGRKPVM LFGMTLMLAAYFPGFHLLSKTLNPALAEAEATTPVVVIADPADCSLQFDPVGKASFASSCDIAKNALANAGVSYRNEAGP AGQPAMVRVGMATIVSADARGLAPEATKAVRASVEGRIRQALARAGYPEKADPARLNFWGALGVMAVFVIAATALYGPMA ACLVELFPTRIRYTALSLPYHIGTGWIGGFVPFSAFAIVTAVGDIYSGLWFPFAFTALSVVICFLFLKETRGRPLDA
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=345, Percent_Identity=35.3623188405797, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI1788292, Length=329, Percent_Identity=36.1702127659575, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI1789941, Length=340, Percent_Identity=35, Blast_Score=145, Evalue=5e-36, Organism=Escherichia coli, GI1788942, Length=326, Percent_Identity=30.9815950920245, Blast_Score=135, Evalue=7e-33, Organism=Escherichia coli, GI87082231, Length=180, Percent_Identity=28.3333333333333, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 59123; Mature: 58991
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADATAERAGAPAKETSLRTVVAASSAGTAFEWYDFFVFGSLAGVISRTFFTGLPETAGL CCCCCCHHCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AAALALFGAGFLFRPLGALVFGRIGDKAGRKGAFLATVLLMGGATFAIGLLPSYEQAGLI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHEEECCCCHHHCCCH GPALLILMRILQGFALGGEYGGAAIYVAEHAPPNGRGWATSWVQTSAALGLFGALLVILA HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TRLILGEFVGAEAFDAWGWRIPFLFSAGLLAISVWMRLKLSESPAFQKLKDEGNVPHAPF HHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCH AEAFGRWDNLKIVLLALFAIMSAQGAVWYTAFFYVQTFMERFLKAPPETITALMLSATAI HHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SAVLYVFFGWLSDRVGRKPVMLFGMTLMLAAYFPGFHLLSKTLNPALAEAEATTPVVVIA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHCCCCCCEEEEE DPADCSLQFDPVGKASFASSCDIAKNALANAGVSYRNEAGPAGQPAMVRVGMATIVSADA CCCCCCEEECCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC RGLAPEATKAVRASVEGRIRQALARAGYPEKADPARLNFWGALGVMAVFVIAATALYGPM CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AACLVELFPTRIRYTALSLPYHIGTGWIGGFVPFSAFAIVTAVGDIYSGLWFPFAFTALS HHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVICFLFLKETRGRPLDA HHHHHHHHHHHCCCCCCC >Mature Secondary Structure ADATAERAGAPAKETSLRTVVAASSAGTAFEWYDFFVFGSLAGVISRTFFTGLPETAGL CCCCCHHCCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH AAALALFGAGFLFRPLGALVFGRIGDKAGRKGAFLATVLLMGGATFAIGLLPSYEQAGLI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHEEECCCCHHHCCCH GPALLILMRILQGFALGGEYGGAAIYVAEHAPPNGRGWATSWVQTSAALGLFGALLVILA HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TRLILGEFVGAEAFDAWGWRIPFLFSAGLLAISVWMRLKLSESPAFQKLKDEGNVPHAPF HHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCH AEAFGRWDNLKIVLLALFAIMSAQGAVWYTAFFYVQTFMERFLKAPPETITALMLSATAI HHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH SAVLYVFFGWLSDRVGRKPVMLFGMTLMLAAYFPGFHLLSKTLNPALAEAEATTPVVVIA HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHCCCCCCEEEEE DPADCSLQFDPVGKASFASSCDIAKNALANAGVSYRNEAGPAGQPAMVRVGMATIVSADA CCCCCCEEECCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC RGLAPEATKAVRASVEGRIRQALARAGYPEKADPARLNFWGALGVMAVFVIAATALYGPM CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AACLVELFPTRIRYTALSLPYHIGTGWIGGFVPFSAFAIVTAVGDIYSGLWFPFAFTALS HHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVICFLFLKETRGRPLDA HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]