| Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
|---|---|
| Accession | NC_011126 |
| Length | 1,559,514 |
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The map label for this gene is 195952561
Identifier: 195952561
GI number: 195952561
Start: 162477
End: 162947
Strand: Direct
Name: 195952561
Synonym: HY04AAS1_0181
Alternate gene names: NA
Gene position: 162477-162947 (Clockwise)
Preceding gene: 195952554
Following gene: 195952562
Centisome position: 10.42
GC content: 36.31
Gene sequence:
>471_bases ATGCTTTGCAGTGATATAATTAAAATTATGAAAAAGTTTTTTTGTATATCATGTTTACTTAGTTTTTTGGCTTTTGGTGA AAATGTGCAAATTGTCCAACAACCTATACAACCTTCCCAAAACGCTAATCCACCCCAAGCCAATACATCTTCTCCCGCCC AGGCACCATCTAACTCTCAATCTTCAAATTCTCAAAATCAATGTCCTACCGAAGATGCTATAAAAGGATATCTCGTATCC CAGAATTTAGCCACATATACGATATTGGCTATTGTTCCCTCCCAATCTGTGCCAGGATATTGTGATGTTATACTAAAGAG CATGAACAACAAGACATTTTTTATTAGAATAAGAAACGATATGGCTTACGTTATATCTGGAAGCGTTGTCAATACAACTA CTGGCAAGGTGCAAGTACCAGATATGAGCAAATTTAACACCACAGACAACACTACAAACAATCAGCAATGA
Upstream 100 bases:
>100_bases ATCTTTTATATCTATTGTGTGCTCTTTTATAAAGATAGATACATCAATTTTCCCCTCAATGGTTTCTTTCGTTAAGTCCA TAGCCTAATTTTAACAAAAT
Downstream 100 bases:
>100_bases TATCTTCTTTTGTAATAACGGGGTTTTTAGGTGCTGGTAAAACTACTTTTATGCTAAAAGCTGTAAAAGAGCATTTTAAA GATAAAAAAGTAGCTGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MLCSDIIKIMKKFFCISCLLSFLAFGENVQIVQQPIQPSQNANPPQANTSSPAQAPSNSQSSNSQNQCPTEDAIKGYLVS QNLATYTILAIVPSQSVPGYCDVILKSMNNKTFFIRIRNDMAYVISGSVVNTTTGKVQVPDMSKFNTTDNTTNNQQ
Sequences:
>Translated_156_residues MLCSDIIKIMKKFFCISCLLSFLAFGENVQIVQQPIQPSQNANPPQANTSSPAQAPSNSQSSNSQNQCPTEDAIKGYLVS QNLATYTILAIVPSQSVPGYCDVILKSMNNKTFFIRIRNDMAYVISGSVVNTTTGKVQVPDMSKFNTTDNTTNNQQ >Mature_156_residues MLCSDIIKIMKKFFCISCLLSFLAFGENVQIVQQPIQPSQNANPPQANTSSPAQAPSNSQSSNSQNQCPTEDAIKGYLVS QNLATYTILAIVPSQSVPGYCDVILKSMNNKTFFIRIRNDMAYVISGSVVNTTTGKVQVPDMSKFNTTDNTTNNQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17051; Mature: 17051
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCSDIIKIMKKFFCISCLLSFLAFGENVQIVQQPIQPSQNANPPQANTSSPAQAPSNSQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SSNSQNQCPTEDAIKGYLVSQNLATYTILAIVPSQSVPGYCDVILKSMNNKTFFIRIRND CCCCCCCCCCHHHHHEEHCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCC MAYVISGSVVNTTTGKVQVPDMSKFNTTDNTTNNQQ EEEEEECCEEECCCCEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLCSDIIKIMKKFFCISCLLSFLAFGENVQIVQQPIQPSQNANPPQANTSSPAQAPSNSQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SSNSQNQCPTEDAIKGYLVSQNLATYTILAIVPSQSVPGYCDVILKSMNNKTFFIRIRND CCCCCCCCCCHHHHHEEHCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCC MAYVISGSVVNTTTGKVQVPDMSKFNTTDNTTNNQQ EEEEEECCEEECCCCEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA