Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is 195952444

Identifier: 195952444

GI number: 195952444

Start: 60800

End: 61264

Strand: Direct

Name: 195952444

Synonym: HY04AAS1_0064

Alternate gene names: NA

Gene position: 60800-61264 (Clockwise)

Preceding gene: 195952438

Following gene: 195952445

Centisome position: 3.9

GC content: 33.55

Gene sequence:

>465_bases
ATGTCCAGTCTAGATAGAGATGCTTTGTATAGGCTTGATATATTGGTTAGGCATTGTGAGGATATCTTAAGCAAACTGGA
TAGTATTAAAGAACAACTTAACAATGATAGTTTATTAGATAGGCTTGTAGAAGGCGTACGCATGCATGAATTGTATATAT
TAAATTTTAAAAAGTTTTTAAACAGTGAGATTGATTGGATACCGCCAAAATATACACAATGCAATTTTGGCAAGATATAC
TACAGCATTGATAAAAGCTATATTTCAAAGACTTACGGAGAAGCTGCTGCTTCTATGTTTGAAAGAATTGGCAATATTCA
TATGAGTTTTCACGAAACCACTGAGGAATGTCTTAAGCGTAAAAGTAACTATGAAGTTAAAATGCTAATCGTAGAGTTGG
CTTCCAAAAGTAGTATGTTGGTAGATATGGTGTTGAGGCTATCGGCAACAATGTCAAGAAACTAA

Upstream 100 bases:

>100_bases
GCCGCCTCCACCATAATAATAAACAACAGACTGTAAGATCTTAACCAAAAATTAAGAAAAATAGAATATAATAATGTCTA
AATTAATTAGGAGGGTCATT

Downstream 100 bases:

>100_bases
GATAAGCCAAAGCTTATAGAAAAATAACAATTTTTCATAGCACAAACAATCTCAATAGGTTAAAATAAAAGATATTAGCT
ATTTGGAGGTAAAATAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MSSLDRDALYRLDILVRHCEDILSKLDSIKEQLNNDSLLDRLVEGVRMHELYILNFKKFLNSEIDWIPPKYTQCNFGKIY
YSIDKSYISKTYGEAAASMFERIGNIHMSFHETTEECLKRKSNYEVKMLIVELASKSSMLVDMVLRLSATMSRN

Sequences:

>Translated_154_residues
MSSLDRDALYRLDILVRHCEDILSKLDSIKEQLNNDSLLDRLVEGVRMHELYILNFKKFLNSEIDWIPPKYTQCNFGKIY
YSIDKSYISKTYGEAAASMFERIGNIHMSFHETTEECLKRKSNYEVKMLIVELASKSSMLVDMVLRLSATMSRN
>Mature_153_residues
SSLDRDALYRLDILVRHCEDILSKLDSIKEQLNNDSLLDRLVEGVRMHELYILNFKKFLNSEIDWIPPKYTQCNFGKIYY
SIDKSYISKTYGEAAASMFERIGNIHMSFHETTEECLKRKSNYEVKMLIVELASKSSMLVDMVLRLSATMSRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18003; Mature: 17872

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLDRDALYRLDILVRHCEDILSKLDSIKEQLNNDSLLDRLVEGVRMHELYILNFKKFL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
NSEIDWIPPKYTQCNFGKIYYSIDKSYISKTYGEAAASMFERIGNIHMSFHETTEECLKR
CCCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KSNYEVKMLIVELASKSSMLVDMVLRLSATMSRN
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSLDRDALYRLDILVRHCEDILSKLDSIKEQLNNDSLLDRLVEGVRMHELYILNFKKFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
NSEIDWIPPKYTQCNFGKIYYSIDKSYISKTYGEAAASMFERIGNIHMSFHETTEECLKR
CCCCCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
KSNYEVKMLIVELASKSSMLVDMVLRLSATMSRN
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA