Definition Chloroherpeton thalassium ATCC 35110 chromosome, complete genome.
Accession NC_011026
Length 3,293,456

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The map label for this gene is 193213750

Identifier: 193213750

GI number: 193213750

Start: 41348

End: 42292

Strand: Direct

Name: 193213750

Synonym: Ctha_0030

Alternate gene names: NA

Gene position: 41348-42292 (Clockwise)

Preceding gene: 193213749

Following gene: 193213751

Centisome position: 1.26

GC content: 46.24

Gene sequence:

>945_bases
ATGCGCAAGATTTTTACCGTGCTCTGTGGATTGCTTTTGCTGGCAACGCCACTTTTTGCTCAAGATAAAGTTTATGATTT
TCTAAATTTAGAAAGAAGTGCCAAAGTTGCAGCGCTGGGCGGAAACAGCGTTTCGTTTATCGGCGACTTAAACGCATTTT
TTCAAAATCCAGCTGTTTTGAACAGCAACACCAATCGGCGTGGGGCATTTAGTTTTCAAAAGCATTTGATGGATATCAAT
TCCGGTTTTGCCGTCTACGGACGCTCCATTGAATCGATTGGCGATTTTGCCGCAGGCGTTTCTTATGTAAACTACGGCAG
CTTCGACGAAACCGATGAGCTTGGCAATATTATCGGATCATTTGCCGCGCAAGATTTGGCGTTGCAGATTGGCTATGCGT
TTGATTTGGAGGAGTATGATTACGGCTACTTGCGCGCCGGCATTTCGTTAAAGTATATTTATTCCAACATTGCGGACTAC
ACGTCTTCGGCGTTGGCGTTAGACGCAGGCATCGTTTTAGTCATTCCCGAGAGCGATGTTGAAATTGGCTTTGCCTTGAC
AAACTACGGCTGGCAACTTGCAAAATATGACGCAGCATCAGAGGATTTGCCTACCGATATGCGCCTTGCCTTGACAACAC
GCCCGGAAGGCCTGCCGCTGGCACTTACAATCGGCCTTGTCCAACTCAACAACGATTTCAGCTTGACGGAAAAAGTGAAA
AATTTCACCATTGGCGGCGAATTTTCTTTTGGGGAATTTGTTAGGTTTCGGTTAGGATTTAATAATGCCCTTCGCAACGA
TGTCAAAAGCGGAGAGAACGCCGGCATGGTGGGCGCATCTGCGGGCTTAGGAATCTTGTATCGCGATTTTCACTTTGATT
ATTCCTACTCTTCATGGGGCTCGATTGGCGCGCTGCATCAATTCTCTATTTCCACAACATTGTAG

Upstream 100 bases:

>100_bases
ACCTTAGATGAAAAGGCTATCGCATGGCAATGGATTTCTTTCAAAGAGAAGCTATCTTCCTCTGAAAATTGTAGAACAGG
TGAAATTTAACCCTTAGCAC

Downstream 100 bases:

>100_bases
ATTTATCAGGCATTTTTGCTCGTCAACTGCAAAAAAAACAAAAAAAGTGACCGCAAAACACCTTACAAACAGGTCGCTCA
TCGCATTCTAAGTTGTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MRKIFTVLCGLLLLATPLFAQDKVYDFLNLERSAKVAALGGNSVSFIGDLNAFFQNPAVLNSNTNRRGAFSFQKHLMDIN
SGFAVYGRSIESIGDFAAGVSYVNYGSFDETDELGNIIGSFAAQDLALQIGYAFDLEEYDYGYLRAGISLKYIYSNIADY
TSSALALDAGIVLVIPESDVEIGFALTNYGWQLAKYDAASEDLPTDMRLALTTRPEGLPLALTIGLVQLNNDFSLTEKVK
NFTIGGEFSFGEFVRFRLGFNNALRNDVKSGENAGMVGASAGLGILYRDFHFDYSYSSWGSIGALHQFSISTTL

Sequences:

>Translated_314_residues
MRKIFTVLCGLLLLATPLFAQDKVYDFLNLERSAKVAALGGNSVSFIGDLNAFFQNPAVLNSNTNRRGAFSFQKHLMDIN
SGFAVYGRSIESIGDFAAGVSYVNYGSFDETDELGNIIGSFAAQDLALQIGYAFDLEEYDYGYLRAGISLKYIYSNIADY
TSSALALDAGIVLVIPESDVEIGFALTNYGWQLAKYDAASEDLPTDMRLALTTRPEGLPLALTIGLVQLNNDFSLTEKVK
NFTIGGEFSFGEFVRFRLGFNNALRNDVKSGENAGMVGASAGLGILYRDFHFDYSYSSWGSIGALHQFSISTTL
>Mature_314_residues
MRKIFTVLCGLLLLATPLFAQDKVYDFLNLERSAKVAALGGNSVSFIGDLNAFFQNPAVLNSNTNRRGAFSFQKHLMDIN
SGFAVYGRSIESIGDFAAGVSYVNYGSFDETDELGNIIGSFAAQDLALQIGYAFDLEEYDYGYLRAGISLKYIYSNIADY
TSSALALDAGIVLVIPESDVEIGFALTNYGWQLAKYDAASEDLPTDMRLALTTRPEGLPLALTIGLVQLNNDFSLTEKVK
NFTIGGEFSFGEFVRFRLGFNNALRNDVKSGENAGMVGASAGLGILYRDFHFDYSYSSWGSIGALHQFSISTTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34261; Mature: 34261

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIFTVLCGLLLLATPLFAQDKVYDFLNLERSAKVAALGGNSVSFIGDLNAFFQNPAVL
CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEECHHHHHCCCEEE
NSNTNRRGAFSFQKHLMDINSGFAVYGRSIESIGDFAAGVSYVNYGSFDETDELGNIIGS
CCCCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH
FAAQDLALQIGYAFDLEEYDYGYLRAGISLKYIYSNIADYTSSALALDAGIVLVIPESDV
HHHHHEEEEEEEEECCCCCCCCEEEECCEEEHHHHHHHHHHCCCEEECCCEEEEECCCCC
EIGFALTNYGWQLAKYDAASEDLPTDMRLALTTRPEGLPLALTIGLVQLNNDFSLTEKVK
EEEEEEECCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCHHHHHHH
NFTIGGEFSFGEFVRFRLGFNNALRNDVKSGENAGMVGASAGLGILYRDFHFDYSYSSWG
HEECCCCCCHHHEEEEEECCCHHHHHHHCCCCCCCEEECCCCCEEEEEEEECCCCCCCCC
SIGALHQFSISTTL
CCCCEEEEEEECCC
>Mature Secondary Structure
MRKIFTVLCGLLLLATPLFAQDKVYDFLNLERSAKVAALGGNSVSFIGDLNAFFQNPAVL
CHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEECCCCEEEEECHHHHHCCCEEE
NSNTNRRGAFSFQKHLMDINSGFAVYGRSIESIGDFAAGVSYVNYGSFDETDELGNIIGS
CCCCCCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHH
FAAQDLALQIGYAFDLEEYDYGYLRAGISLKYIYSNIADYTSSALALDAGIVLVIPESDV
HHHHHEEEEEEEEECCCCCCCCEEEECCEEEHHHHHHHHHHCCCEEECCCEEEEECCCCC
EIGFALTNYGWQLAKYDAASEDLPTDMRLALTTRPEGLPLALTIGLVQLNNDFSLTEKVK
EEEEEEECCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCHHHHHHH
NFTIGGEFSFGEFVRFRLGFNNALRNDVKSGENAGMVGASAGLGILYRDFHFDYSYSSWG
HEECCCCCCHHHEEEEEECCCHHHHHHHCCCCCCCEEECCCCCEEEEEEEECCCCCCCCC
SIGALHQFSISTTL
CCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA