| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is resE [H]
Identifier: 193212325
GI number: 193212325
Start: 705269
End: 707059
Strand: Direct
Name: resE [H]
Synonym: Cpar_0658
Alternate gene names: 193212325
Gene position: 705269-707059 (Clockwise)
Preceding gene: 193212324
Following gene: 193212326
Centisome position: 30.81
GC content: 60.47
Gene sequence:
>1791_bases GTGAAGGCTAAGGTCTCATTCAGACTCGGCCTGGTTTTCGGTCTGATCGTCTTTTTCTCGCTCGCCCTGAGCTACGTGTA TCAGGGGCGACATCTTCGCGAGGTGGTGTTCAAGACGGTTCGCGCCGGCCTGTTGCACGACCTCAAGCTCAATGCCGGGA TGCTCGATCAGCGCCCCGACGGCTGGCCGGACATCGCGCTCTCCGACCGCTGGGCGGACAAGGTCGGCAAGGCGCTCGAC CTTCGCGTGACGCTCATCGACCTCGATGGCCGGGTGATTGGTGACTCCTACATTCCCACGGAAAAAATTCCTTCCATTCC GAATCATCGGGATCGGGTTGAAATCAAATCGGCGCTCTCCAGCGGGCTGGGCGAATCGAAGCGTTTCAGCGAGACCATCC GCGAGAACATGCTCTACATGGCCATGCCGGTCGGCAAGCCCGACACCTGGGCCGTCCTCCGGCTGGCGAAACCTCTGCAC GACATCGGCCAGGTGGAAGCGCAGATCGACCGTGGCATCGAGGGCGGCCTGTTCTGGGCGCTTCTGCTTGCGCTTACTGC CGGAGGGCTTTCGGCGTTTTTCCTGTCGCGCCCGCTGGGGCGTATTGCCGATGCGGCCGACCGGTTCCTGCATGGCGAAA CCGAGGTGCAGATTCCCGTAAAGCATGACGATGAGATCGGACGCCTTGCGCGAGCCTTCAACTACCTCTCCGAAGAGATC GTCAGGCTGACGCGCAAGGAGGAGTGGCTTCGCGAAGTGCTTTCAAGTATTCGCGAGTCGATTATCGTGACCAACGCTTC GGGCGAAATCGTGCTGGCCAATCCGGCGGCGTCGCGCCTGTTCATGATCGAGGGGGCGCGGAAACGGTCGATTCCAGTCG ATCACATCGAACTTCCGGAGATGCGGGAGCTGTTCGTGCGTGTGCATGCCCGCCAGAGCGGAATCTACAACGAAGAGCTG AGCGTTATGACTGCCCGGGGCGAGCGGGTGTTCAAGGTCACCGCCGTGCCGGTCGTGAAGGGCGAGCAATTCGACGGCAC GGTGCTGGTCATCAACGACATCACCCGCCTGCGCAACCTGGAACGCACCCGCCGCGACTTCGTTTCCAGCGTGTCGCACG AGTTGCGTACGCCGTTGGCGAGCATCAAGGGCTATACCGAAACCCTGCTCGAAGGCGCGGTCAACGATCCGGAGCATGCC ACTGCATTTCTGCGCATCATCCAGCAGGAGAGCGAGCAACTCACCGCGCTCATCAACGACGTGCTCGACCTGTCGCGCAT CGAATCGGGCAAGATCATCTATAATTTTGAGCCGGTCGATGTGAAGCCGGCGCTCGAAAAAACGATGGCGCTGTTCGAGC CTGCCGCGTCCCGCAAAGGGGTGCGCATCGAGCTGAACGTGCCCGATGGGTTGCCGCCGGTGCTGGCCGACCGGAACTAT TTCGATATCGTGATGCGCAACCTCATCGACAATGCGGTTAAATACGTCGATGCGAACCGCGGGCGTGTCAGGGTCAGCGC CTGCAAGGCCGATCAGAACGTCGCTATCGAGGTTTCCGATAACGGCATCGGTATTCCGCAGGCCGATCTGAAGCGGATTT TCGAGCGCTTCTACCGCGTTGACAAGGCCCGCTCGCGGGAGCTTGCCGGCACTGGTCTCGGACTGTCGATCGTCAAGCAC ATTCTGCTCGCGCACAAAGGGAATGTCGAGGTGCGCTCAAAAACCAACAGCGGTTCTACTTTTACGGTGACCTTCCCGAT TGCCGGAAAGGAAGCTGCTTCGAGCACCTGA
Upstream 100 bases:
>100_bases CACGTCACCCGCCTCCGCGAAAAGCTCGGCGATGCCGGAAAGCTCATCAAAACCGTGCGCGGGCTCGGCTACAAGTTCGA CGAAGGCGAAGAGGAGTCCG
Downstream 100 bases:
>100_bases TCATCCCGGTTTCCCTCCTGCGGCCAGGCTTCGGTTAGTTCCGGATTTTTTGTATTAATAAGCACCGAACAGCTTTCGTC AGATTTGCTGTCGCTTGACC
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 596; Mature: 596
Protein sequence:
>596_residues MKAKVSFRLGLVFGLIVFFSLALSYVYQGRHLREVVFKTVRAGLLHDLKLNAGMLDQRPDGWPDIALSDRWADKVGKALD LRVTLIDLDGRVIGDSYIPTEKIPSIPNHRDRVEIKSALSSGLGESKRFSETIRENMLYMAMPVGKPDTWAVLRLAKPLH DIGQVEAQIDRGIEGGLFWALLLALTAGGLSAFFLSRPLGRIADAADRFLHGETEVQIPVKHDDEIGRLARAFNYLSEEI VRLTRKEEWLREVLSSIRESIIVTNASGEIVLANPAASRLFMIEGARKRSIPVDHIELPEMRELFVRVHARQSGIYNEEL SVMTARGERVFKVTAVPVVKGEQFDGTVLVINDITRLRNLERTRRDFVSSVSHELRTPLASIKGYTETLLEGAVNDPEHA TAFLRIIQQESEQLTALINDVLDLSRIESGKIIYNFEPVDVKPALEKTMALFEPAASRKGVRIELNVPDGLPPVLADRNY FDIVMRNLIDNAVKYVDANRGRVRVSACKADQNVAIEVSDNGIGIPQADLKRIFERFYRVDKARSRELAGTGLGLSIVKH ILLAHKGNVEVRSKTNSGSTFTVTFPIAGKEAASST
Sequences:
>Translated_596_residues MKAKVSFRLGLVFGLIVFFSLALSYVYQGRHLREVVFKTVRAGLLHDLKLNAGMLDQRPDGWPDIALSDRWADKVGKALD LRVTLIDLDGRVIGDSYIPTEKIPSIPNHRDRVEIKSALSSGLGESKRFSETIRENMLYMAMPVGKPDTWAVLRLAKPLH DIGQVEAQIDRGIEGGLFWALLLALTAGGLSAFFLSRPLGRIADAADRFLHGETEVQIPVKHDDEIGRLARAFNYLSEEI VRLTRKEEWLREVLSSIRESIIVTNASGEIVLANPAASRLFMIEGARKRSIPVDHIELPEMRELFVRVHARQSGIYNEEL SVMTARGERVFKVTAVPVVKGEQFDGTVLVINDITRLRNLERTRRDFVSSVSHELRTPLASIKGYTETLLEGAVNDPEHA TAFLRIIQQESEQLTALINDVLDLSRIESGKIIYNFEPVDVKPALEKTMALFEPAASRKGVRIELNVPDGLPPVLADRNY FDIVMRNLIDNAVKYVDANRGRVRVSACKADQNVAIEVSDNGIGIPQADLKRIFERFYRVDKARSRELAGTGLGLSIVKH ILLAHKGNVEVRSKTNSGSTFTVTFPIAGKEAASST >Mature_596_residues MKAKVSFRLGLVFGLIVFFSLALSYVYQGRHLREVVFKTVRAGLLHDLKLNAGMLDQRPDGWPDIALSDRWADKVGKALD LRVTLIDLDGRVIGDSYIPTEKIPSIPNHRDRVEIKSALSSGLGESKRFSETIRENMLYMAMPVGKPDTWAVLRLAKPLH DIGQVEAQIDRGIEGGLFWALLLALTAGGLSAFFLSRPLGRIADAADRFLHGETEVQIPVKHDDEIGRLARAFNYLSEEI VRLTRKEEWLREVLSSIRESIIVTNASGEIVLANPAASRLFMIEGARKRSIPVDHIELPEMRELFVRVHARQSGIYNEEL SVMTARGERVFKVTAVPVVKGEQFDGTVLVINDITRLRNLERTRRDFVSSVSHELRTPLASIKGYTETLLEGAVNDPEHA TAFLRIIQQESEQLTALINDVLDLSRIESGKIIYNFEPVDVKPALEKTMALFEPAASRKGVRIELNVPDGLPPVLADRNY FDIVMRNLIDNAVKYVDANRGRVRVSACKADQNVAIEVSDNGIGIPQADLKRIFERFYRVDKARSRELAGTGLGLSIVKH ILLAHKGNVEVRSKTNSGSTFTVTFPIAGKEAASST
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=228, Percent_Identity=33.3333333333333, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1786600, Length=336, Percent_Identity=27.6785714285714, Blast_Score=133, Evalue=4e-32, Organism=Escherichia coli, GI1789149, Length=232, Percent_Identity=33.1896551724138, Blast_Score=129, Evalue=7e-31, Organism=Escherichia coli, GI48994928, Length=231, Percent_Identity=35.0649350649351, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI1788549, Length=388, Percent_Identity=27.0618556701031, Blast_Score=122, Evalue=6e-29, Organism=Escherichia coli, GI1788713, Length=546, Percent_Identity=23.4432234432234, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1786912, Length=227, Percent_Identity=32.15859030837, Blast_Score=113, Evalue=4e-26, Organism=Escherichia coli, GI145693157, Length=234, Percent_Identity=31.1965811965812, Blast_Score=109, Evalue=5e-25, Organism=Escherichia coli, GI87081816, Length=229, Percent_Identity=30.5676855895196, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1790346, Length=236, Percent_Identity=29.2372881355932, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1790436, Length=221, Percent_Identity=28.5067873303167, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI1786783, Length=246, Percent_Identity=29.6747967479675, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI87082128, Length=233, Percent_Identity=29.1845493562232, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1790861, Length=218, Percent_Identity=30.7339449541284, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1787894, Length=249, Percent_Identity=26.1044176706827, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1787374, Length=240, Percent_Identity=28.3333333333333, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1789403, Length=230, Percent_Identity=32.6086956521739, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1789808, Length=240, Percent_Identity=27.5, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1788279, Length=233, Percent_Identity=24.8927038626609, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1790300, Length=363, Percent_Identity=23.9669421487603, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1790551, Length=246, Percent_Identity=24.390243902439, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 66386; Mature: 66386
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS50885 HAMP ; PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKVSFRLGLVFGLIVFFSLALSYVYQGRHLREVVFKTVRAGLLHDLKLNAGMLDQRPD CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GWPDIALSDRWADKVGKALDLRVTLIDLDGRVIGDSYIPTEKIPSIPNHRDRVEIKSALS CCCCCCCCCHHHHHHCCEEEEEEEEEECCCEEECCCCCCHHHCCCCCCCCHHHHHHHHHH SGLGESKRFSETIRENMLYMAMPVGKPDTWAVLRLAKPLHDIGQVEAQIDRGIEGGLFWA HCCCCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LLLALTAGGLSAFFLSRPLGRIADAADRFLHGETEVQIPVKHDDEIGRLARAFNYLSEEI HHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH VRLTRKEEWLREVLSSIRESIIVTNASGEIVLANPAASRLFMIEGARKRSIPVDHIELPE HHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCHH MRELFVRVHARQSGIYNEELSVMTARGERVFKVTAVPVVKGEQFDGTVLVINDITRLRNL HHHHHHHHHHHHCCCCCCCHHEEEECCCEEEEEEEEEEEECCCCCCEEEEEECHHHHHHH ERTRRDFVSSVSHELRTPLASIKGYTETLLEGAVNDPEHATAFLRIIQQESEQLTALIND HHHHHHHHHHHHHHHHCHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VLDLSRIESGKIIYNFEPVDVKPALEKTMALFEPAASRKGVRIELNVPDGLPPVLADRNY HHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHCCCCH FDIVMRNLIDNAVKYVDANRGRVRVSACKADQNVAIEVSDNGIGIPQADLKRIFERFYRV HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH DKARSRELAGTGLGLSIVKHILLAHKGNVEVRSKTNSGSTFTVTFPIAGKEAASST HHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCCCCCC >Mature Secondary Structure MKAKVSFRLGLVFGLIVFFSLALSYVYQGRHLREVVFKTVRAGLLHDLKLNAGMLDQRPD CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC GWPDIALSDRWADKVGKALDLRVTLIDLDGRVIGDSYIPTEKIPSIPNHRDRVEIKSALS CCCCCCCCCHHHHHHCCEEEEEEEEEECCCEEECCCCCCHHHCCCCCCCCHHHHHHHHHH SGLGESKRFSETIRENMLYMAMPVGKPDTWAVLRLAKPLHDIGQVEAQIDRGIEGGLFWA HCCCCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LLLALTAGGLSAFFLSRPLGRIADAADRFLHGETEVQIPVKHDDEIGRLARAFNYLSEEI HHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHH VRLTRKEEWLREVLSSIRESIIVTNASGEIVLANPAASRLFMIEGARKRSIPVDHIELPE HHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCHH MRELFVRVHARQSGIYNEELSVMTARGERVFKVTAVPVVKGEQFDGTVLVINDITRLRNL HHHHHHHHHHHHCCCCCCCHHEEEECCCEEEEEEEEEEEECCCCCCEEEEEECHHHHHHH ERTRRDFVSSVSHELRTPLASIKGYTETLLEGAVNDPEHATAFLRIIQQESEQLTALIND HHHHHHHHHHHHHHHHCHHHHHCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VLDLSRIESGKIIYNFEPVDVKPALEKTMALFEPAASRKGVRIELNVPDGLPPVLADRNY HHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHCCCCH FDIVMRNLIDNAVKYVDANRGRVRVSACKADQNVAIEVSDNGIGIPQADLKRIFERFYRV HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH DKARSRELAGTGLGLSIVKHILLAHKGNVEVRSKTNSGSTFTVTFPIAGKEAASST HHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]