Definition Chlorobaculum parvum NCIB 8327 chromosome, complete genome.
Accession NC_011027
Length 2,289,249

Click here to switch to the map view.

The map label for this gene is 193212262

Identifier: 193212262

GI number: 193212262

Start: 639744

End: 640484

Strand: Direct

Name: 193212262

Synonym: Cpar_0595

Alternate gene names: NA

Gene position: 639744-640484 (Clockwise)

Preceding gene: 193212261

Following gene: 193212263

Centisome position: 27.95

GC content: 56.41

Gene sequence:

>741_bases
ATGCGTTCGCTCGCCATTCGCATCGCAGCCGTCACGGTATTGCTTTGTTGCCAGCCCTTCCATTCCGAAGCCCTTGCCTG
GCATGACAAAACCCACCTGACCATAGCCGAAGCCGCCGGGCTCGATATCTGGTACAATGCCGTTGCAGCTGACGTGGCCA
AATCGAAAGAGCCGTTCCGGGCGATTGAGGTTCCGAACCACTACTTTAGCAACAAGGCCAATAAAAAAGTTACGGCGGAG
ATGGTCATGGCGCAGGCTGCTCGTTACAACCAACCGGATGACAAAGAGGGGCATCTCTATGGTGCAATCATCGGTTCGGT
CAGAGAGTACTTCGCGCTGGCCCGAACCGGCAAATACGCCCGCTATCCGCTGGCCTACTCCGCCCACTACATCGCTGACC
TCTCCATGCCGCTGCACAATGTTCCCTACGACGCGTTCAACAAAGCGCACCACACGATCAACGACGGTATCATTGAACGC
AGTGTGCGTAATAACATCGGTTACATCCAGCGCAAAATGAAGCCGCCGGTTATCAACAGCGAAGAGGATCTGGCGCGTGA
AATCGCTGTTGTCGCCGAATCGTCCCGGAAACTCGGCAACAGGATGAGACGTCAGAAGCGGGATATGACCGAAGAGGAGG
CCTACAGTCAGGTAATCAAAAGCGCCGCGTTGTTGCACGCCGTGCTGGCCTGGACCGAGCGGGTCAATGCGGAGCAGGAG
ATGGCTGTCGCAGGGGAATAG

Upstream 100 bases:

>100_bases
CGGCCCGGCAATATTTCCGCGAATCCCTCCTCCATCGTTGCCGACTCCACATTCCTCTGTGTACCTTCTTTCATTGCACA
ACATTTCAGAAGGAGTCATC

Downstream 100 bases:

>100_bases
CGTGAGCGGAAATGTTTCAAGCAGGATTATAGCTTTATGAGCAAAACAGTCCTTATCACAGGCGCGTCGGGGTTTATCGG
TTCGCATCTGGTAAAGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRSLAIRIAAVTVLLCCQPFHSEALAWHDKTHLTIAEAAGLDIWYNAVAADVAKSKEPFRAIEVPNHYFSNKANKKVTAE
MVMAQAARYNQPDDKEGHLYGAIIGSVREYFALARTGKYARYPLAYSAHYIADLSMPLHNVPYDAFNKAHHTINDGIIER
SVRNNIGYIQRKMKPPVINSEEDLAREIAVVAESSRKLGNRMRRQKRDMTEEEAYSQVIKSAALLHAVLAWTERVNAEQE
MAVAGE

Sequences:

>Translated_246_residues
MRSLAIRIAAVTVLLCCQPFHSEALAWHDKTHLTIAEAAGLDIWYNAVAADVAKSKEPFRAIEVPNHYFSNKANKKVTAE
MVMAQAARYNQPDDKEGHLYGAIIGSVREYFALARTGKYARYPLAYSAHYIADLSMPLHNVPYDAFNKAHHTINDGIIER
SVRNNIGYIQRKMKPPVINSEEDLAREIAVVAESSRKLGNRMRRQKRDMTEEEAYSQVIKSAALLHAVLAWTERVNAEQE
MAVAGE
>Mature_246_residues
MRSLAIRIAAVTVLLCCQPFHSEALAWHDKTHLTIAEAAGLDIWYNAVAADVAKSKEPFRAIEVPNHYFSNKANKKVTAE
MVMAQAARYNQPDDKEGHLYGAIIGSVREYFALARTGKYARYPLAYSAHYIADLSMPLHNVPYDAFNKAHHTINDGIIER
SVRNNIGYIQRKMKPPVINSEEDLAREIAVVAESSRKLGNRMRRQKRDMTEEEAYSQVIKSAALLHAVLAWTERVNAEQE
MAVAGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27668; Mature: 27668

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLAIRIAAVTVLLCCQPFHSEALAWHDKTHLTIAEAAGLDIWYNAVAADVAKSKEPFR
CCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEHHHCCCHHHHHHHHHHHHHCCCCCE
AIEVPNHYFSNKANKKVTAEMVMAQAARYNQPDDKEGHLYGAIIGSVREYFALARTGKYA
EEECCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
RYPLAYSAHYIADLSMPLHNVPYDAFNKAHHTINDGIIERSVRNNIGYIQRKMKPPVINS
CCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EEDLAREIAVVAESSRKLGNRMRRQKRDMTEEEAYSQVIKSAALLHAVLAWTERVNAEQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
MAVAGE
HHCCCC
>Mature Secondary Structure
MRSLAIRIAAVTVLLCCQPFHSEALAWHDKTHLTIAEAAGLDIWYNAVAADVAKSKEPFR
CCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEHHHCCCHHHHHHHHHHHHHCCCCCE
AIEVPNHYFSNKANKKVTAEMVMAQAARYNQPDDKEGHLYGAIIGSVREYFALARTGKYA
EEECCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
RYPLAYSAHYIADLSMPLHNVPYDAFNKAHHTINDGIIERSVRNNIGYIQRKMKPPVINS
CCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EEDLAREIAVVAESSRKLGNRMRRQKRDMTEEEAYSQVIKSAALLHAVLAWTERVNAEQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
MAVAGE
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA