Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is ycbL [C]

Identifier: 192289351

GI number: 192289351

Start: 981723

End: 982787

Strand: Reverse

Name: ycbL [C]

Synonym: Rpal_0923

Alternate gene names: 192289351

Gene position: 982787-981723 (Counterclockwise)

Preceding gene: 192289352

Following gene: 192289350

Centisome position: 17.11

GC content: 63.19

Gene sequence:

>1065_bases
ATGCATAAGAAGACCGACGCGACCGAGACGTCGCACGACGAACTGCGCTATCTGCAGGACTGTCACCCCGGCCCCGACCA
GGCGGTCGAGATCGTGCCGGGCGTGCTGTGGCTGCGGCTGCGGCTGCCGTTTCGGCTCAACCACGTGAACATCTATCTGC
TCGCCGATGGCGACGCCTGGGCGATGGTCGACACCGGCTTCGGCAACGATGCGACCATCGCGGCCTGGGAGACGCTGTTC
GACGGTGCGCTGGCTGGCTTTAGCATCAGCCGGGTGATCGTCACTCATGCCCATCCGGACCATGTCGGCATGGCGGGCTG
GATCGTGCAGCGGTTCGGCTGTCCGCTCTACATGTCGCAGATCGAGTATCTGCAAGGCGTGTATCACCAGAACCGTCGCA
CCGAAGAACGGCTGGTCAACAACCGCGCGTTCTTCCGCCGCCACGGCATCGACGAAGCCGTGATCGACCAACTCGTCGGC
CGCGGCCAGGACTATCTGAAAAAGACCGTGCCGCTGCCGGCAGCGTATCGTCGGCTCGCCAAGGGCAAGGACATCACTGT
CGGCGAGCGAACGTTCCGGATCATCACCGGCGCCGGCCACTCGCCCGATCAGGTGATGCTGTATTGCGAGGCCGACAAGC
TATTCCTTTCCGCCGACCAGGTGCTGAGCAAGATCTCGCCGAATGTCAGCGTGTGGGCTCACGAGCCCGACGAAGACGCC
CTCGGCTCGTATCTTTCGTCGCTCGCAGAGCTCGACACATTCCTGCCGGACGACGTCCTGGTGCTGCCCGGTCACGGCCT
GCCGTTCCACGGCGTCAAGACCCGCATCAAGCAGCTGGCCGATCATCACGAGGAGCGCTGCGGGATGATCGCGGACGCTT
GCCGTACCAAACCGATGAGTTCGGCCGAACTGGTACCGGTGGTATTTCACAAACACGTGCTCGATGCGCATCAAACCGGC
TTCGCCGTCGGCGAGCTGATCGCCCACGTGAACTACATGCTGGCGCAGAACCGTTTGCAGCTGGCGCCCACCACGGACGG
TGTGATGCGGTTCACCAACGTTTAA

Upstream 100 bases:

>100_bases
TGGAATTTGAGACCTGTGAGGACTGCAGCCGCCCCTGACGGTTTTTCGGCTGGCGCCGCCGCTCCGCGCCCGGTAAGCCG
GATCAGGGAGCATGCGCCGA

Downstream 100 bases:

>100_bases
CGTTTGCAGCGTTGTCCGCGTATTCCCTGACAAGGCCGCATTCGAGCCAAGGCATTGATCTTCATCAAGCCTTGCCCTGC
AGAACCGGTGATATGGATCG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta Lactamase; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase; Zinc Metallohydrolase; Zinc Metallohydrolase Glyoxalase II Family; Zn-Dependent Hydrolases; Metallo-Dependent Enzymatic Protein; AMP-Dependent Synthetase And Ligase; Metal Dependent Hydrolase; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MHKKTDATETSHDELRYLQDCHPGPDQAVEIVPGVLWLRLRLPFRLNHVNIYLLADGDAWAMVDTGFGNDATIAAWETLF
DGALAGFSISRVIVTHAHPDHVGMAGWIVQRFGCPLYMSQIEYLQGVYHQNRRTEERLVNNRAFFRRHGIDEAVIDQLVG
RGQDYLKKTVPLPAAYRRLAKGKDITVGERTFRIITGAGHSPDQVMLYCEADKLFLSADQVLSKISPNVSVWAHEPDEDA
LGSYLSSLAELDTFLPDDVLVLPGHGLPFHGVKTRIKQLADHHEERCGMIADACRTKPMSSAELVPVVFHKHVLDAHQTG
FAVGELIAHVNYMLAQNRLQLAPTTDGVMRFTNV

Sequences:

>Translated_354_residues
MHKKTDATETSHDELRYLQDCHPGPDQAVEIVPGVLWLRLRLPFRLNHVNIYLLADGDAWAMVDTGFGNDATIAAWETLF
DGALAGFSISRVIVTHAHPDHVGMAGWIVQRFGCPLYMSQIEYLQGVYHQNRRTEERLVNNRAFFRRHGIDEAVIDQLVG
RGQDYLKKTVPLPAAYRRLAKGKDITVGERTFRIITGAGHSPDQVMLYCEADKLFLSADQVLSKISPNVSVWAHEPDEDA
LGSYLSSLAELDTFLPDDVLVLPGHGLPFHGVKTRIKQLADHHEERCGMIADACRTKPMSSAELVPVVFHKHVLDAHQTG
FAVGELIAHVNYMLAQNRLQLAPTTDGVMRFTNV
>Mature_354_residues
MHKKTDATETSHDELRYLQDCHPGPDQAVEIVPGVLWLRLRLPFRLNHVNIYLLADGDAWAMVDTGFGNDATIAAWETLF
DGALAGFSISRVIVTHAHPDHVGMAGWIVQRFGCPLYMSQIEYLQGVYHQNRRTEERLVNNRAFFRRHGIDEAVIDQLVG
RGQDYLKKTVPLPAAYRRLAKGKDITVGERTFRIITGAGHSPDQVMLYCEADKLFLSADQVLSKISPNVSVWAHEPDEDA
LGSYLSSLAELDTFLPDDVLVLPGHGLPFHGVKTRIKQLADHHEERCGMIADACRTKPMSSAELVPVVFHKHVLDAHQTG
FAVGELIAHVNYMLAQNRLQLAPTTDGVMRFTNV

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39561; Mature: 39561

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKKTDATETSHDELRYLQDCHPGPDQAVEIVPGVLWLRLRLPFRLNHVNIYLLADGDAW
CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCEEECEEEEEEEECCCEE
AMVDTGFGNDATIAAWETLFDGALAGFSISRVIVTHAHPDHVGMAGWIVQRFGCPLYMSQ
EEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHCCHHHHHH
IEYLQGVYHQNRRTEERLVNNRAFFRRHGIDEAVIDQLVGRGQDYLKKTVPLPAAYRRLA
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHH
KGKDITVGERTFRIITGAGHSPDQVMLYCEADKLFLSADQVLSKISPNVSVWAHEPDEDA
CCCCCEECCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCHHH
LGSYLSSLAELDTFLPDDVLVLPGHGLPFHGVKTRIKQLADHHEERCGMIADACRTKPMS
HHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SAELVPVVFHKHVLDAHQTGFAVGELIAHVNYMLAQNRLQLAPTTDGVMRFTNV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHEECCC
>Mature Secondary Structure
MHKKTDATETSHDELRYLQDCHPGPDQAVEIVPGVLWLRLRLPFRLNHVNIYLLADGDAW
CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHEEEEECCEEECEEEEEEEECCCEE
AMVDTGFGNDATIAAWETLFDGALAGFSISRVIVTHAHPDHVGMAGWIVQRFGCPLYMSQ
EEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHCCHHHHHH
IEYLQGVYHQNRRTEERLVNNRAFFRRHGIDEAVIDQLVGRGQDYLKKTVPLPAAYRRLA
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHH
KGKDITVGERTFRIITGAGHSPDQVMLYCEADKLFLSADQVLSKISPNVSVWAHEPDEDA
CCCCCEECCEEEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCHHH
LGSYLSSLAELDTFLPDDVLVLPGHGLPFHGVKTRIKQLADHHEERCGMIADACRTKPMS
HHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SAELVPVVFHKHVLDAHQTGFAVGELIAHVNYMLAQNRLQLAPTTDGVMRFTNV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA