Definition Orientia tsutsugamushi str. Ikeda, complete genome.
Accession NC_010793
Length 2,008,987

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The map label for this gene is 189183409

Identifier: 189183409

GI number: 189183409

Start: 519687

End: 520445

Strand: Reverse

Name: 189183409

Synonym: OTT_0502

Alternate gene names: NA

Gene position: 520445-519687 (Counterclockwise)

Preceding gene: 189183410

Following gene: 189183407

Centisome position: 25.91

GC content: 28.59

Gene sequence:

>759_bases
TTGTTCTTAGCTGAGTTATTAACAATAGCGATATATTTTTATGTATCTCCATGTAAGGATTGTAAAAATTATTATCTATA
TTACTTGAGTCATAAGTATAAAAGATACTTTTGTTTACCAAGTTATAGTAGAATAATACAACTGTGGCCTAGAATGTTAC
TACAGCTAGCTGTATTAATGCATTATCTGAAAGGAGAAGAGACTGGTATATATTATATCGATTCTACAAAGTTAGCAATT
TGTCATAACAAACACATTTTCAGCAATAGAGTTTTTAACAAAATTTCTAAAATTGGTAAGAGTAGTTATGGCTGGTTCTT
ATGCTTTAAGCTTCATCTTATAATCAATAATAAAGGCGAAATAATGTCAGTTAAAATTACTAAAGGCAATAAAAGTGACC
TATCTGTAGCTTCAGTTTTTTCTGAAGGCTTATCTGGTAAATTGTTTGGTGATAAAGCTTACATATCTAAAGAGTTATTT
CATCAACTGCTGACCAATGGTATACGTTTATTTACTAATCTTCGTAAAGATATGAAAACATATTTATTGGACATACAAGA
TAATCGATTATTAAATAAACGTTCTTTAATTGAGTCTGTCTTTAATGTACTAAAAAAACATATGCATTTAGAGCATACTA
GACACCGTTCTCTTCTTAATTTCTTTGTTCATATAATTGCTTCTCTTGCTAGTTATTCTATCTCTACACTTAATCCCTAC
CTTATCTCCTCTTCTTTTTCTTCATTCAACTTATCTTAA

Upstream 100 bases:

>100_bases
ACAGTTATACTATTTAATAGACAATTTTTGCAAGATATATCAAGAGTGTGAGAGAAAGAGATTAATACCAAGTAGTAATC
AAAGGAACAGAGATGGGAAG

Downstream 100 bases:

>100_bases
TCTAGCGTTAATAGTTAAGAATTGCTGTTTTATAGTTTTTATTCCACCAACGTAAAATGCTACTTCAATGTTATCATTCA
TAATCCTTATTACTGTGCCT

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase And Inactivated Derivative; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase IS; Protease

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLQLAVLMHYLKGEETGIYYIDSTKLAI
CHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGEIMSVKITKGNKSDLSVASVFSEGLSGKLFGDKAYISKELF
HQLLTNGIRLFTNLRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHRSLLNFFVHIIASLASYSISTLNPY
LISSSFSSFNLS

Sequences:

>Translated_252_residues
MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLQLAVLMHYLKGEETGIYYIDSTKLAI
CHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGEIMSVKITKGNKSDLSVASVFSEGLSGKLFGDKAYISKELF
HQLLTNGIRLFTNLRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHRSLLNFFVHIIASLASYSISTLNPY
LISSSFSSFNLS
>Mature_252_residues
MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLQLAVLMHYLKGEETGIYYIDSTKLAI
CHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGEIMSVKITKGNKSDLSVASVFSEGLSGKLFGDKAYISKELF
HQLLTNGIRLFTNLRKDMKTYLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHRSLLNFFVHIIASLASYSISTLNPY
LISSSFSSFNLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29435; Mature: 29435

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLQLAVLM
CHHHHHHHHHHHHHHCCHHHHHHHEEHEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHH
HYLKGEETGIYYIDSTKLAICHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGE
HHHCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCC
IMSVKITKGNKSDLSVASVFSEGLSGKLFGDKAYISKELFHQLLTNGIRLFTNLRKDMKT
EEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHRSLLNFFVHIIASLASYSISTLNPY
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LISSSFSSFNLS
HEECCCCCCCCC
>Mature Secondary Structure
MFLAELLTIAIYFYVSPCKDCKNYYLYYLSHKYKRYFCLPSYSRIIQLWPRMLLQLAVLM
CHHHHHHHHHHHHHHCCHHHHHHHEEHEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHH
HYLKGEETGIYYIDSTKLAICHNKHIFSNRVFNKISKIGKSSYGWFLCFKLHLIINNKGE
HHHCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCC
IMSVKITKGNKSDLSVASVFSEGLSGKLFGDKAYISKELFHQLLTNGIRLFTNLRKDMKT
EEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLDIQDNRLLNKRSLIESVFNVLKKHMHLEHTRHRSLLNFFVHIIASLASYSISTLNPY
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LISSSFSSFNLS
HEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA