Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is tap [C]

Identifier: 187934642

GI number: 187934642

Start: 3265049

End: 3267151

Strand: Reverse

Name: tap [C]

Synonym: CLL_A3150

Alternate gene names: 187934642

Gene position: 3267151-3265049 (Counterclockwise)

Preceding gene: 187935319

Following gene: 187932981

Centisome position: 85.97

GC content: 28.67

Gene sequence:

>2103_bases
ATGAAAAATAAAATCCAGGTTTATTTTAAGAAAGCATCTGTAAAATCTAAATTAATGTTAATAATTATACCAATAGTTGC
TTTTGGATTATTGTTATTAACATCAATAACATATGGTTCTGCAAAAAATATGATACAAAAAGAATTAGTTAATCTTATGT
CAGAAAGGGAAGCAGAAGCTGTAAACAATATTGATACTTGGTTAAATTCAAGACTTTCAGAAGTTAAGGAAGTAGCTCAA
AGTCCTATATTAGAACGTGTTTTAGAACTTAATCCGGACTTGAATTTAGAAAATAATGATGAATCTATAGCTCTTATAGA
CCAATTAAATTTATCACGTTGGACTTTTGTTAATAATACATATCCTGATGAATATGCAGCTTTGCATATTTTGAGTGGAA
TTTCATCGAATGAATGGAAAAATGTAGAAAATTCAAACAAACTTTTAGCAAGATATTATAATGTAAATGGGGATGAAAAT
AAAACTTCTCCATGGGCTAAAGCAGCCTTAGAAGAAACCTTTAAAAAATTTTCTAATAATAATGGTCCTTATGATATAAT
TTTAAATCCTACATATTCTGAAGCATATAAGAGAAATGTTGTTATGATGATTGCTTGGAAAAAAGATGGAATGGGAGAGG
CTAAAATAGGGGCAGCTTCTAGTTTAGCAATAGAAGTAGTAGAAAATAAAGTAAAAGAATTAAAATATGGTAAAAAGGGA
TATGGAATGTTAATAGCCGATGATGGGACATTCATATCACATCCGAATCAAGAATATGTTATGAAAGAAAATATAAATAC
ATTAGAAGATAAGGAAATGCTAAAGCTATCATCTACTATAAAATCACAAGATAAAGGTATAATTAAACTGGGTATGGGTA
CTGGAAAGAAGCTAGCATTTTATCAGAAAGTACCTGTAACTAATTGGATGGTAGTGAATGTAGTATATGAAAGTGAACTT
TTCTCAATTTGTACTAAATTATTAATATTAATGATAATAATAGCAATATTAATTATAATAGTGGTTATTTTAACAATATA
TAAGTTTTCAACTAATATGCTTAAACCATTAACAAATATAAGTATATTTGCTGATGAAGTAGCAGCTGGCAATTTAAGTG
CAAATATAAATATTAATTCAGATGATGAATTTGGAAAAGTTGCTAAAGCATTAAATAATACAGCTCAATATTTAAAAAAT
TATATTTCTGAAATAGATGAAGTACTAGGAAGTATTTCTAATGGAAACATTAATGTAAATGTAGAAGGTGAATATAAAGG
TGATTTTGTAGGTATAAAAGAATCTTTAATAAAAATAATATCATCCTTAAATAATACATTTACTCAAATAAGAGAAGCAA
CACAACAAGTTTCTAGTGGATCTCAGGAGGTAGCTTCAGTAGCTCAAGTATTAGCACAAGGAGCATCTGATCAAGCAAGT
TCAATAGATGAGTTAACAGCATCAATTGGGGACATTAATGAACAATTAAAAGGTACAGCAGAACATGCAAATGGAACTAA
TAAAATTGTAAATCAATTAGTTACATATATTGAAGATAGTAACAAACAAATGGACGGTATGTTAAGTGCTATGAGCAACA
TTGATGTTTCATCTAAAAATATACAAAATATAATAAAAACAATAGCTGATATAGCTGAACAAACTAATCTCTTAGCTTTA
AATGCAGCAATAGAAGCAGCAAGAGCAGGAGAAGCAGGTAAGGGGTTTGCAGTAGTTGCTGATGAAGTAAGAATGCTTGC
AGAACAAAGTTCACAAGCAGTTAAGAGAACAACAGAACTTATTGAAAATTCTATAGAATCTGTTAATGAAGGTAAAGTGA
TAGCAGATAATACAGCAAGTTCATTAAAAGAAGTTGTAGAACATACTAAAGGAGCCACTGAATTAGTTATTAATATAGCT
AATTTAGCAGAAGAACAATCAGAATCTCTTAATAAAATAAATGAAAGAATAGAAGAAATAGCTAATGTAATTCAATCTAA
TTCATCAATAGCAGAAGAAAGTACAGCTGCTAGTGAAGAATTAACAGCACAAGCGGAAAGCTTAGATTACATGGTTGCAC
AATTTGAATTAAAAGAAGATTAG

Upstream 100 bases:

>100_bases
TTTTAAGTAGAACTATAAATTTTTAAATATTATTATAGGTTACAATTTTAAAAATTATTAAATATGTAAAATTATAAAAA
ATATTATTAGGAGGGTGATC

Downstream 100 bases:

>100_bases
TATATTCTGTGTTTTAACAAAAAAAGTTAATATTATAGTATAAAGCTCGTGGACTCAGGAATTTACTTTATGAACTCTAA
AAATAAAGCTTAGTCTAATT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 700; Mature: 700

Protein sequence:

>700_residues
MKNKIQVYFKKASVKSKLMLIIIPIVAFGLLLLTSITYGSAKNMIQKELVNLMSEREAEAVNNIDTWLNSRLSEVKEVAQ
SPILERVLELNPDLNLENNDESIALIDQLNLSRWTFVNNTYPDEYAALHILSGISSNEWKNVENSNKLLARYYNVNGDEN
KTSPWAKAALEETFKKFSNNNGPYDIILNPTYSEAYKRNVVMMIAWKKDGMGEAKIGAASSLAIEVVENKVKELKYGKKG
YGMLIADDGTFISHPNQEYVMKENINTLEDKEMLKLSSTIKSQDKGIIKLGMGTGKKLAFYQKVPVTNWMVVNVVYESEL
FSICTKLLILMIIIAILIIIVVILTIYKFSTNMLKPLTNISIFADEVAAGNLSANININSDDEFGKVAKALNNTAQYLKN
YISEIDEVLGSISNGNINVNVEGEYKGDFVGIKESLIKIISSLNNTFTQIREATQQVSSGSQEVASVAQVLAQGASDQAS
SIDELTASIGDINEQLKGTAEHANGTNKIVNQLVTYIEDSNKQMDGMLSAMSNIDVSSKNIQNIIKTIADIAEQTNLLAL
NAAIEAARAGEAGKGFAVVADEVRMLAEQSSQAVKRTTELIENSIESVNEGKVIADNTASSLKEVVEHTKGATELVINIA
NLAEEQSESLNKINERIEEIANVIQSNSSIAEESTAASEELTAQAESLDYMVAQFELKED

Sequences:

>Translated_700_residues
MKNKIQVYFKKASVKSKLMLIIIPIVAFGLLLLTSITYGSAKNMIQKELVNLMSEREAEAVNNIDTWLNSRLSEVKEVAQ
SPILERVLELNPDLNLENNDESIALIDQLNLSRWTFVNNTYPDEYAALHILSGISSNEWKNVENSNKLLARYYNVNGDEN
KTSPWAKAALEETFKKFSNNNGPYDIILNPTYSEAYKRNVVMMIAWKKDGMGEAKIGAASSLAIEVVENKVKELKYGKKG
YGMLIADDGTFISHPNQEYVMKENINTLEDKEMLKLSSTIKSQDKGIIKLGMGTGKKLAFYQKVPVTNWMVVNVVYESEL
FSICTKLLILMIIIAILIIIVVILTIYKFSTNMLKPLTNISIFADEVAAGNLSANININSDDEFGKVAKALNNTAQYLKN
YISEIDEVLGSISNGNINVNVEGEYKGDFVGIKESLIKIISSLNNTFTQIREATQQVSSGSQEVASVAQVLAQGASDQAS
SIDELTASIGDINEQLKGTAEHANGTNKIVNQLVTYIEDSNKQMDGMLSAMSNIDVSSKNIQNIIKTIADIAEQTNLLAL
NAAIEAARAGEAGKGFAVVADEVRMLAEQSSQAVKRTTELIENSIESVNEGKVIADNTASSLKEVVEHTKGATELVINIA
NLAEEQSESLNKINERIEEIANVIQSNSSIAEESTAASEELTAQAESLDYMVAQFELKED
>Mature_700_residues
MKNKIQVYFKKASVKSKLMLIIIPIVAFGLLLLTSITYGSAKNMIQKELVNLMSEREAEAVNNIDTWLNSRLSEVKEVAQ
SPILERVLELNPDLNLENNDESIALIDQLNLSRWTFVNNTYPDEYAALHILSGISSNEWKNVENSNKLLARYYNVNGDEN
KTSPWAKAALEETFKKFSNNNGPYDIILNPTYSEAYKRNVVMMIAWKKDGMGEAKIGAASSLAIEVVENKVKELKYGKKG
YGMLIADDGTFISHPNQEYVMKENINTLEDKEMLKLSSTIKSQDKGIIKLGMGTGKKLAFYQKVPVTNWMVVNVVYESEL
FSICTKLLILMIIIAILIIIVVILTIYKFSTNMLKPLTNISIFADEVAAGNLSANININSDDEFGKVAKALNNTAQYLKN
YISEIDEVLGSISNGNINVNVEGEYKGDFVGIKESLIKIISSLNNTFTQIREATQQVSSGSQEVASVAQVLAQGASDQAS
SIDELTASIGDINEQLKGTAEHANGTNKIVNQLVTYIEDSNKQMDGMLSAMSNIDVSSKNIQNIIKTIADIAEQTNLLAL
NAAIEAARAGEAGKGFAVVADEVRMLAEQSSQAVKRTTELIENSIESVNEGKVIADNTASSLKEVVEHTKGATELVINIA
NLAEEQSESLNKINERIEEIANVIQSNSSIAEESTAASEELTAQAESLDYMVAQFELKED

Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=379, Percent_Identity=31.9261213720317, Blast_Score=158, Evalue=1e-39,
Organism=Escherichia coli, GI1788195, Length=300, Percent_Identity=34.3333333333333, Blast_Score=150, Evalue=4e-37,
Organism=Escherichia coli, GI1787690, Length=288, Percent_Identity=32.2916666666667, Blast_Score=145, Evalue=6e-36,
Organism=Escherichia coli, GI2367378, Length=343, Percent_Identity=26.8221574344023, Blast_Score=135, Evalue=8e-33,
Organism=Escherichia coli, GI1789453, Length=359, Percent_Identity=29.8050139275766, Blast_Score=132, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 76958; Mature: 76958

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKIQVYFKKASVKSKLMLIIIPIVAFGLLLLTSITYGSAKNMIQKELVNLMSEREAEA
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VNNIDTWLNSRLSEVKEVAQSPILERVLELNPDLNLENNDESIALIDQLNLSRWTFVNNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCC
YPDEYAALHILSGISSNEWKNVENSNKLLARYYNVNGDENKTSPWAKAALEETFKKFSNN
CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
NGPYDIILNPTYSEAYKRNVVMMIAWKKDGMGEAKIGAASSLAIEVVENKVKELKYGKKG
CCCEEEEECCCHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
YGMLIADDGTFISHPNQEYVMKENINTLEDKEMLKLSSTIKSQDKGIIKLGMGTGKKLAF
CEEEEECCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEE
YQKVPVTNWMVVNVVYESELFSICTKLLILMIIIAILIIIVVILTIYKFSTNMLKPLTNI
EEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIFADEVAAGNLSANININSDDEFGKVAKALNNTAQYLKNYISEIDEVLGSISNGNINVN
HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
VEGEYKGDFVGIKESLIKIISSLNNTFTQIREATQQVSSGSQEVASVAQVLAQGASDQAS
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHH
SIDELTASIGDINEQLKGTAEHANGTNKIVNQLVTYIEDSNKQMDGMLSAMSNIDVSSKN
HHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHH
IQNIIKTIADIAEQTNLLALNAAIEAARAGEAGKGFAVVADEVRMLAEQSSQAVKRTTEL
HHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IENSIESVNEGKVIADNTASSLKEVVEHTKGATELVINIANLAEEQSESLNKINERIEEI
HHHHHHHCCCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANVIQSNSSIAEESTAASEELTAQAESLDYMVAQFELKED
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
>Mature Secondary Structure
MKNKIQVYFKKASVKSKLMLIIIPIVAFGLLLLTSITYGSAKNMIQKELVNLMSEREAEA
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VNNIDTWLNSRLSEVKEVAQSPILERVLELNPDLNLENNDESIALIDQLNLSRWTFVNNT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEECCC
YPDEYAALHILSGISSNEWKNVENSNKLLARYYNVNGDENKTSPWAKAALEETFKKFSNN
CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
NGPYDIILNPTYSEAYKRNVVMMIAWKKDGMGEAKIGAASSLAIEVVENKVKELKYGKKG
CCCEEEEECCCHHHHHHCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
YGMLIADDGTFISHPNQEYVMKENINTLEDKEMLKLSSTIKSQDKGIIKLGMGTGKKLAF
CEEEEECCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEE
YQKVPVTNWMVVNVVYESELFSICTKLLILMIIIAILIIIVVILTIYKFSTNMLKPLTNI
EEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIFADEVAAGNLSANININSDDEFGKVAKALNNTAQYLKNYISEIDEVLGSISNGNINVN
HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
VEGEYKGDFVGIKESLIKIISSLNNTFTQIREATQQVSSGSQEVASVAQVLAQGASDQAS
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHH
SIDELTASIGDINEQLKGTAEHANGTNKIVNQLVTYIEDSNKQMDGMLSAMSNIDVSSKN
HHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHH
IQNIIKTIADIAEQTNLLALNAAIEAARAGEAGKGFAVVADEVRMLAEQSSQAVKRTTEL
HHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IENSIESVNEGKVIADNTASSLKEVVEHTKGATELVINIANLAEEQSESLNKINERIEEI
HHHHHHHCCCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANVIQSNSSIAEESTAASEELTAQAESLDYMVAQFELKED
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8436949 [H]