Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

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The map label for this gene is 187918599

Identifier: 187918599

GI number: 187918599

Start: 795376

End: 797079

Strand: Direct

Name: 187918599

Synonym: BH0743

Alternate gene names: NA

Gene position: 795376-797079 (Clockwise)

Preceding gene: 187918598

Following gene: 187918600

Centisome position: 86.24

GC content: 29.64

Gene sequence:

>1704_bases
ATGTTTAACCATTACAGGATGTTTGTGGTTTTGAAGGTAAATGTTTGTATTTTTATATTTTTAGGTGCTTGTTTTTCCCT
TTCAGCAGATGTTAATCTTTATTTCCAGAAAGCTTTAACAGGGCAGGTTTTAGGAAATCCTATTCTTGATGAGAGACGTA
ATACTATTACGGTGTTAACAAAGGATAGGTGGTTGGTAACTTATACTGTGTCTTTAAATAAAAAGTATTCTTATAGGCTA
GATCGAACCCCATATCCCTTCCTTTTAAAGGATTTTGGTAGTGGATATTATGTTATTACAGGACGTAATGAAGTACAAAA
GATTAGAAGAGGAAAGCTTATATGGAGGTATAATTTAGGTGTCCCGCCTATAAAAGCTCCTTCAATAGGGAATGGTTATA
TTTTAATTCCTCAGGCTGATGGAAAAGTTATTGCTTTAAGACTTGGTGATGGTCAAAAGGTTTTTGAGGCAAATATAGAA
GGGAAGGCAGCAACTTCTTCTGTTGTTCTTGAGAATGGCAATTTTTATATTGCAAATGAAAATTATAAAATGTTTGCTTT
TAATTCTGAGGGAGAGCAAATATGGAGCACTGAGCTTATGTCTTTTCCCAATGCATTAATGATAAGTACTAATAATGAAA
TAGTGGTTGGATGTCAATCTGGAGATGTTGTTGTGTATGATAGTGATTTTGGCGATATGTTAGGTTCTATTAGTTTAAAC
TATCCTATTAATTTTTTATTTGAGAAGTTTAATGGGGAATATATTGCAGTCTCTGATATTGGGATTTTTTTTAATTTAAG
TAGGAACTTTGATCTCATGTTTTCTGAGAATTTACCTTTAAAACTTAAGGAAGCCGTGCTTTATGATAATAAAAATCTTT
TTATTGTTATGGAGTCAAATGGTGTTTTAGCTCTTGATGAATATTTCAAACCAGTTGATAGGTATGATGATATTAAGGAA
ATATCGGGTCTTGTATCTAATGTTGGAATGATTGCTACTGGTGGATTTAATTGGATACTAACTACTTATTATTATGAATA
TAAAGATGAGCTTGATTTTATTGTTTGGAATCATACATTAGGTAATAGATATCATCAAAATAGGATAGATTTTAGAGAAA
AATCTTTAGTAGATCATGAGGATATTTATTTGGCTCTTGATGAAATGTTGAATTCTACATACAATAGAAAGGTTTATAAT
AAGTTTTTAAGTGTTCTAGATTCTTTGGTAATGAAATATGGTAGTTTCCCTAAAAAATATTTGAATTTATATAGAAAAGC
TATTAATAATTGGCTTGCTCCAAAAAATGGAGTTGATAGAATAGCTCAAAGGGGGCAGCTTTATAAATATTTTATGTATG
TTGATGATGCAGCCTCGGTTAAGAGTTTTATCAATATGGCAATTGAAGAAAAGGATATTAATAATGTAATTCAATTAGTT
AACAGTATTGCTGGATTTGAATATTATTATGGGCAAGATGAGCTTGTATATAATTATATTCAGTATGTAATATTAAATTA
TCAGGGTAATTTAGAGATAGCATATGCTGTTCTTTTAAGCTTGCGCAAGATAATTTTGAATTCTACAGAGGATAATCTTA
AGAGATATAGAAGTAAATATTTAACTCTTTTGAAATTTGTAAGACGTCAAAATTTTTCTGAAAAAATTAATCAATGTATT
AATGAAATTATTGTATCTCTTTGA

Upstream 100 bases:

>100_bases
GATCGTTTTATGACTTTTTCAGAGTATATTGATGATTCTAAAGTCAAAGAATTAAGAGATAAGCTTTATGAAGGACATAC
CAGCTTGAAACTTTGATTAT

Downstream 100 bases:

>100_bases
TTTATTTTGTTGCTAATTTTATGTTATTATTTATTGAATACATCTTATAGTAAGTTAAGATTGATGTTTAATTTATGCCG
ATTTAGTTAATAATAAGGTT

Product: hypothetical membrane spanning protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 567; Mature: 567

Protein sequence:

>567_residues
MFNHYRMFVVLKVNVCIFIFLGACFSLSADVNLYFQKALTGQVLGNPILDERRNTITVLTKDRWLVTYTVSLNKKYSYRL
DRTPYPFLLKDFGSGYYVITGRNEVQKIRRGKLIWRYNLGVPPIKAPSIGNGYILIPQADGKVIALRLGDGQKVFEANIE
GKAATSSVVLENGNFYIANENYKMFAFNSEGEQIWSTELMSFPNALMISTNNEIVVGCQSGDVVVYDSDFGDMLGSISLN
YPINFLFEKFNGEYIAVSDIGIFFNLSRNFDLMFSENLPLKLKEAVLYDNKNLFIVMESNGVLALDEYFKPVDRYDDIKE
ISGLVSNVGMIATGGFNWILTTYYYEYKDELDFIVWNHTLGNRYHQNRIDFREKSLVDHEDIYLALDEMLNSTYNRKVYN
KFLSVLDSLVMKYGSFPKKYLNLYRKAINNWLAPKNGVDRIAQRGQLYKYFMYVDDAASVKSFINMAIEEKDINNVIQLV
NSIAGFEYYYGQDELVYNYIQYVILNYQGNLEIAYAVLLSLRKIILNSTEDNLKRYRSKYLTLLKFVRRQNFSEKINQCI
NEIIVSL

Sequences:

>Translated_567_residues
MFNHYRMFVVLKVNVCIFIFLGACFSLSADVNLYFQKALTGQVLGNPILDERRNTITVLTKDRWLVTYTVSLNKKYSYRL
DRTPYPFLLKDFGSGYYVITGRNEVQKIRRGKLIWRYNLGVPPIKAPSIGNGYILIPQADGKVIALRLGDGQKVFEANIE
GKAATSSVVLENGNFYIANENYKMFAFNSEGEQIWSTELMSFPNALMISTNNEIVVGCQSGDVVVYDSDFGDMLGSISLN
YPINFLFEKFNGEYIAVSDIGIFFNLSRNFDLMFSENLPLKLKEAVLYDNKNLFIVMESNGVLALDEYFKPVDRYDDIKE
ISGLVSNVGMIATGGFNWILTTYYYEYKDELDFIVWNHTLGNRYHQNRIDFREKSLVDHEDIYLALDEMLNSTYNRKVYN
KFLSVLDSLVMKYGSFPKKYLNLYRKAINNWLAPKNGVDRIAQRGQLYKYFMYVDDAASVKSFINMAIEEKDINNVIQLV
NSIAGFEYYYGQDELVYNYIQYVILNYQGNLEIAYAVLLSLRKIILNSTEDNLKRYRSKYLTLLKFVRRQNFSEKINQCI
NEIIVSL
>Mature_567_residues
MFNHYRMFVVLKVNVCIFIFLGACFSLSADVNLYFQKALTGQVLGNPILDERRNTITVLTKDRWLVTYTVSLNKKYSYRL
DRTPYPFLLKDFGSGYYVITGRNEVQKIRRGKLIWRYNLGVPPIKAPSIGNGYILIPQADGKVIALRLGDGQKVFEANIE
GKAATSSVVLENGNFYIANENYKMFAFNSEGEQIWSTELMSFPNALMISTNNEIVVGCQSGDVVVYDSDFGDMLGSISLN
YPINFLFEKFNGEYIAVSDIGIFFNLSRNFDLMFSENLPLKLKEAVLYDNKNLFIVMESNGVLALDEYFKPVDRYDDIKE
ISGLVSNVGMIATGGFNWILTTYYYEYKDELDFIVWNHTLGNRYHQNRIDFREKSLVDHEDIYLALDEMLNSTYNRKVYN
KFLSVLDSLVMKYGSFPKKYLNLYRKAINNWLAPKNGVDRIAQRGQLYKYFMYVDDAASVKSFINMAIEEKDINNVIQLV
NSIAGFEYYYGQDELVYNYIQYVILNYQGNLEIAYAVLLSLRKIILNSTEDNLKRYRSKYLTLLKFVRRQNFSEKINQCI
NEIIVSL

Specific function: Unknown

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65631; Mature: 65631

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNHYRMFVVLKVNVCIFIFLGACFSLSADVNLYFQKALTGQVLGNPILDERRNTITVLT
CCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCCCEEEEEE
KDRWLVTYTVSLNKKYSYRLDRTPYPFLLKDFGSGYYVITGRNEVQKIRRGKLIWRYNLG
CCCEEEEEEEEECCCEEEEECCCCCCHHHHHCCCCEEEEECCHHHHHHHCCCEEEEECCC
VPPIKAPSIGNGYILIPQADGKVIALRLGDGQKVFEANIEGKAATSSVVLENGNFYIANE
CCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEECCCEEEECC
NYKMFAFNSEGEQIWSTELMSFPNALMISTNNEIVVGCQSGDVVVYDSDFGDMLGSISLN
CEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCEEEEECCCCEEEEECCHHHHHCCEEEC
YPINFLFEKFNGEYIAVSDIGIFFNLSRNFDLMFSENLPLKLKEAVLYDNKNLFIVMESN
CCCEEEEECCCCCEEEEEEEEEEEEECCCEEEEEECCCCCEEEEEEEECCCCEEEEECCC
GVLALDEYFKPVDRYDDIKEISGLVSNVGMIATGGFNWILTTYYYEYKDELDFIVWNHTL
CEEEEHHHCCCHHHCCHHHHHHHHHHCCCEEEECCCCEEEEEEEEEECCCEEEEEEECCC
GNRYHQNRIDFREKSLVDHEDIYLALDEMLNSTYNRKVYNKFLSVLDSLVMKYGSFPKKY
CCCHHCCCCCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LNLYRKAINNWLAPKNGVDRIAQRGQLYKYFMYVDDAASVKSFINMAIEEKDINNVIQLV
HHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
NSIAGFEYYYGQDELVYNYIQYVILNYQGNLEIAYAVLLSLRKIILNSTEDNLKRYRSKY
HHHCCCEEEECCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LTLLKFVRRQNFSEKINQCINEIIVSL
HHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFNHYRMFVVLKVNVCIFIFLGACFSLSADVNLYFQKALTGQVLGNPILDERRNTITVLT
CCCCEEEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCCCCCCCCCCEEEEEE
KDRWLVTYTVSLNKKYSYRLDRTPYPFLLKDFGSGYYVITGRNEVQKIRRGKLIWRYNLG
CCCEEEEEEEEECCCEEEEECCCCCCHHHHHCCCCEEEEECCHHHHHHHCCCEEEEECCC
VPPIKAPSIGNGYILIPQADGKVIALRLGDGQKVFEANIEGKAATSSVVLENGNFYIANE
CCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEECCCEEEECC
NYKMFAFNSEGEQIWSTELMSFPNALMISTNNEIVVGCQSGDVVVYDSDFGDMLGSISLN
CEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCEEEEECCCCEEEEECCHHHHHCCEEEC
YPINFLFEKFNGEYIAVSDIGIFFNLSRNFDLMFSENLPLKLKEAVLYDNKNLFIVMESN
CCCEEEEECCCCCEEEEEEEEEEEEECCCEEEEEECCCCCEEEEEEEECCCCEEEEECCC
GVLALDEYFKPVDRYDDIKEISGLVSNVGMIATGGFNWILTTYYYEYKDELDFIVWNHTL
CEEEEHHHCCCHHHCCHHHHHHHHHHCCCEEEECCCCEEEEEEEEEECCCEEEEEEECCC
GNRYHQNRIDFREKSLVDHEDIYLALDEMLNSTYNRKVYNKFLSVLDSLVMKYGSFPKKY
CCCHHCCCCCCHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LNLYRKAINNWLAPKNGVDRIAQRGQLYKYFMYVDDAASVKSFINMAIEEKDINNVIQLV
HHHHHHHHHHCCCCCCCHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
NSIAGFEYYYGQDELVYNYIQYVILNYQGNLEIAYAVLLSLRKIILNSTEDNLKRYRSKY
HHHCCCEEEECCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LTLLKFVRRQNFSEKINQCINEIIVSL
HHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA