Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736601

Identifier: 187736601

GI number: 187736601

Start: 2586960

End: 2588510

Strand: Direct

Name: 187736601

Synonym: Amuc_2123

Alternate gene names: NA

Gene position: 2586960-2588510 (Clockwise)

Preceding gene: 187736600

Following gene: 187736602

Centisome position: 97.1

GC content: 59.06

Gene sequence:

>1551_bases
ATGCCTTCCCCATCCCAGGACACGGTAGCCTGCACTTGCCCGTCATGCGGCAACCTCTTTGCCGTGAAGGCGTCTTTTCT
GGGACGCCAGGTAAAATGCCCCATCTGCACCGCTTCAGTCACAGCCAGGCAGGAAGCAAAGCCCAGGCCGGAAACGGAAA
AACAGGACGCCGCCCCCTGCCTCTGCCATGTTTGCGGCAATCCCTTTGCCGTCAGGGCCGCCTGCGTAGGCAGCCGTGTG
GAATGCCCCGTCTGCCACTCCACCGTCACGGCCGTCAAACGGGAAGAAGCACTTTCAACATTCCCGGGCCGGACGCCTGA
AGTTGCAAAGAAAGCGCCCGGAAATCCGAAACAACCGGCTATTCCGTCATCTGCCGCCGGTGTTCCGCACACTTCCGCGT
ACTCCGCTCCGCATACACCGCTCGCACCAAAGAAAAAGACGGACAGACGGACCATTTCCGTTCACGGGCCTACCACTCCG
GGCCCCAATAAATCCACGACAAAAATCCGTAAAAGGAAAGAGGGAAACGCCGCTCCGGCCATTGCCGCGCCACGCTGCGC
CGCCCTGGCCCCGGAAGAACCGGAATACCGCACTGCCGCCGCGGACCCCATGCGCAGCGAACGCCGGCCCACTTGGCATA
TATGGCTTTTTGTCGCGGGACTGGTTCTTTCCCTTCTGGGCGTGTTCATGTTCCTGCGCGGGAGGGATATGGAAGCGGAA
AACTCCAAACTTCTGAATATCTCAGACCGGTTCGTGGATCATGAAGCGCTCTTTTCACAGGAAGTGAATAAAGACCTGCT
GGAGCAATTGCAGCAGAGGGAGCGGCAATACCGGCTCATAGCCCACAGCCGCAGGGAGGAAGACCGGAAGGCGGAATCCA
TTTCCCCCCATATCACGGCGGCCATGAATGAACTGGCCCTTTACTGCATGGCGGAATCGGATGAAGAGAGGCTCAACTAC
GTGATGAATCCCGCAGCCGTAGCTCCCAAAATGGCCTCTTGGGCCTCCTACGGCCAATACAAGGACTACCTGCCCCAGGA
AGCGGGCAGAAGCTCCAAAAACGGGGACCTGCTCCAAATCACCGTGCTGATGGACGACAACACTATCCGCCCGGCGGTTT
TCCTGTATGACCGGAATTCAGGAAAATGGAAGCTGGACTGGGAAGCCTGGGAGGGCTATTCCCCCATGCTTCCGGCGGAG
CTGGAAGCCAAAAAGCCCTCCACCCCCGTTCCCGTCAGAATCATCCTAAGCATGTCCGGCATTTATCAGCCCCCTTTCCT
GGAGGAATCCTCCGCGGAAAGCTACCGCAACACGTCATATCTCAACTTCACCCTTGAGTTCCCCAACGGGGAACGCCTGA
ATGCGTACGTGGACAGGTATTCCCCGCTGGCCCTGGAACTGACCAGGCTGCTTTACAACGGCCCCGTGCGCACCTGCGTG
CTCATCCGCTATCCGGAAGACCTGCCCGGCAACCGGGCCGTTATTATTGACCAGCTTCTGCACTCCGGCTGGATGAGCGA
CGCCACCCGCAGGCTTCTTCCCCCCCAATAA

Upstream 100 bases:

>100_bases
CGTTTCTTCAGACCATACGGATACAAGCATTACGTTGCCGGCACCCAGGCCCATCACCATTCCCGTGCCGGAATTCATCC
ACCTGTAACTTCTTCACCTC

Downstream 100 bases:

>100_bases
TTGAAAATCAAGAATCGGTTCCCGCTTTCCATGAGTTCCAAAGCACTAGCGCAAACACAGGACAAAGCCCTCCAACTCAA
CCTGGCTTCCACCATTTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MPSPSQDTVACTCPSCGNLFAVKASFLGRQVKCPICTASVTARQEAKPRPETEKQDAAPCLCHVCGNPFAVRAACVGSRV
ECPVCHSTVTAVKREEALSTFPGRTPEVAKKAPGNPKQPAIPSSAAGVPHTSAYSAPHTPLAPKKKTDRRTISVHGPTTP
GPNKSTTKIRKRKEGNAAPAIAAPRCAALAPEEPEYRTAAADPMRSERRPTWHIWLFVAGLVLSLLGVFMFLRGRDMEAE
NSKLLNISDRFVDHEALFSQEVNKDLLEQLQQRERQYRLIAHSRREEDRKAESISPHITAAMNELALYCMAESDEERLNY
VMNPAAVAPKMASWASYGQYKDYLPQEAGRSSKNGDLLQITVLMDDNTIRPAVFLYDRNSGKWKLDWEAWEGYSPMLPAE
LEAKKPSTPVPVRIILSMSGIYQPPFLEESSAESYRNTSYLNFTLEFPNGERLNAYVDRYSPLALELTRLLYNGPVRTCV
LIRYPEDLPGNRAVIIDQLLHSGWMSDATRRLLPPQ

Sequences:

>Translated_516_residues
MPSPSQDTVACTCPSCGNLFAVKASFLGRQVKCPICTASVTARQEAKPRPETEKQDAAPCLCHVCGNPFAVRAACVGSRV
ECPVCHSTVTAVKREEALSTFPGRTPEVAKKAPGNPKQPAIPSSAAGVPHTSAYSAPHTPLAPKKKTDRRTISVHGPTTP
GPNKSTTKIRKRKEGNAAPAIAAPRCAALAPEEPEYRTAAADPMRSERRPTWHIWLFVAGLVLSLLGVFMFLRGRDMEAE
NSKLLNISDRFVDHEALFSQEVNKDLLEQLQQRERQYRLIAHSRREEDRKAESISPHITAAMNELALYCMAESDEERLNY
VMNPAAVAPKMASWASYGQYKDYLPQEAGRSSKNGDLLQITVLMDDNTIRPAVFLYDRNSGKWKLDWEAWEGYSPMLPAE
LEAKKPSTPVPVRIILSMSGIYQPPFLEESSAESYRNTSYLNFTLEFPNGERLNAYVDRYSPLALELTRLLYNGPVRTCV
LIRYPEDLPGNRAVIIDQLLHSGWMSDATRRLLPPQ
>Mature_515_residues
PSPSQDTVACTCPSCGNLFAVKASFLGRQVKCPICTASVTARQEAKPRPETEKQDAAPCLCHVCGNPFAVRAACVGSRVE
CPVCHSTVTAVKREEALSTFPGRTPEVAKKAPGNPKQPAIPSSAAGVPHTSAYSAPHTPLAPKKKTDRRTISVHGPTTPG
PNKSTTKIRKRKEGNAAPAIAAPRCAALAPEEPEYRTAAADPMRSERRPTWHIWLFVAGLVLSLLGVFMFLRGRDMEAEN
SKLLNISDRFVDHEALFSQEVNKDLLEQLQQRERQYRLIAHSRREEDRKAESISPHITAAMNELALYCMAESDEERLNYV
MNPAAVAPKMASWASYGQYKDYLPQEAGRSSKNGDLLQITVLMDDNTIRPAVFLYDRNSGKWKLDWEAWEGYSPMLPAEL
EAKKPSTPVPVRIILSMSGIYQPPFLEESSAESYRNTSYLNFTLEFPNGERLNAYVDRYSPLALELTRLLYNGPVRTCVL
IRYPEDLPGNRAVIIDQLLHSGWMSDATRRLLPPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57307; Mature: 57176

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPSQDTVACTCPSCGNLFAVKASFLGRQVKCPICTASVTARQEAKPRPETEKQDAAPC
CCCCCCCCEEEECCCCCCEEEEEHHHCCCEEECCEEECCHHHHHCCCCCCCCCCCCCCHH
LCHVCGNPFAVRAACVGSRVECPVCHSTVTAVKREEALSTFPGRTPEVAKKAPGNPKQPA
HHHHCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCC
IPSSAAGVPHTSAYSAPHTPLAPKKKTDRRTISVHGPTTPGPNKSTTKIRKRKEGNAAPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCC
IAAPRCAALAPEEPEYRTAAADPMRSERRPTWHIWLFVAGLVLSLLGVFMFLRGRDMEAE
CCCCCHHCCCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCC
NSKLLNISDRFVDHEALFSQEVNKDLLEQLQQRERQYRLIAHSRREEDRKAESISPHITA
CCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AMNELALYCMAESDEERLNYVMNPAAVAPKMASWASYGQYKDYLPQEAGRSSKNGDLLQI
HHHHHEEEEECCCCHHHHHHHCCCHHHCCHHHHHHHCCCHHHHCCHHHCCCCCCCCEEEE
TVLMDDNTIRPAVFLYDRNSGKWKLDWEAWEGYSPMLPAELEAKKPSTPVPVRIILSMSG
EEEECCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
IYQPPFLEESSAESYRNTSYLNFTLEFPNGERLNAYVDRYSPLALELTRLLYNGPVRTCV
CCCCCCCCCCCHHHHCCCEEEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHCCCCEEEE
LIRYPEDLPGNRAVIIDQLLHSGWMSDATRRLLPPQ
EEECCCCCCCCCEEHHHHHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure 
PSPSQDTVACTCPSCGNLFAVKASFLGRQVKCPICTASVTARQEAKPRPETEKQDAAPC
CCCCCCCEEEECCCCCCEEEEEHHHCCCEEECCEEECCHHHHHCCCCCCCCCCCCCCHH
LCHVCGNPFAVRAACVGSRVECPVCHSTVTAVKREEALSTFPGRTPEVAKKAPGNPKQPA
HHHHCCCCCEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCC
IPSSAAGVPHTSAYSAPHTPLAPKKKTDRRTISVHGPTTPGPNKSTTKIRKRKEGNAAPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCC
IAAPRCAALAPEEPEYRTAAADPMRSERRPTWHIWLFVAGLVLSLLGVFMFLRGRDMEAE
CCCCCHHCCCCCCCCCCCCCCCCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCC
NSKLLNISDRFVDHEALFSQEVNKDLLEQLQQRERQYRLIAHSRREEDRKAESISPHITA
CCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AMNELALYCMAESDEERLNYVMNPAAVAPKMASWASYGQYKDYLPQEAGRSSKNGDLLQI
HHHHHEEEEECCCCHHHHHHHCCCHHHCCHHHHHHHCCCHHHHCCHHHCCCCCCCCEEEE
TVLMDDNTIRPAVFLYDRNSGKWKLDWEAWEGYSPMLPAELEAKKPSTPVPVRIILSMSG
EEEECCCCCCCEEEEEECCCCCEEEEHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC
IYQPPFLEESSAESYRNTSYLNFTLEFPNGERLNAYVDRYSPLALELTRLLYNGPVRTCV
CCCCCCCCCCCHHHHCCCEEEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHCCCCEEEE
LIRYPEDLPGNRAVIIDQLLHSGWMSDATRRLLPPQ
EEECCCCCCCCCEEHHHHHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA