Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is pbpG [H]

Identifier: 187736600

GI number: 187736600

Start: 2584458

End: 2586947

Strand: Direct

Name: pbpG [H]

Synonym: Amuc_2122

Alternate gene names: 187736600

Gene position: 2584458-2586947 (Clockwise)

Preceding gene: 187736599

Following gene: 187736601

Centisome position: 97.01

GC content: 58.27

Gene sequence:

>2490_bases
ATGCAGGCCAACAAAAGGCGGCATCCCAAGGCAAAGCCCAGGAAACGATTCTGGAGCTTTATCCGAAAGCTTGTCCTGTG
GTGCCTGGTGATGGCGGCTATCGGCGCGGCCGTGGGATACTTCGGATTCATGATGGCCTGGAAACGTTATAACAACTGGG
CGGCGGAATTTGATCTGGAACGCATCAATGACCTGGAAAAACCCAGCATTATTTATGACCGGAACGGGGAGGAAATAGGC
CGTATTTATGTGGAGAACCGCAGCTACGTCACGCTGGACAAAATCTCCCCCGCCATGATTAACGCGCTGATTGCCCAGGA
AGATTCCCGCTTCCGGGAACATCCGGGCTATGACTTCCTGGGGATTCTGCGGGCAGGCCGGGAGTATATCCACAACAGCG
GGGACGCCAACCAGGGCGCCTCCTCCATCACCCAGCAGCTTGCCAGAAATGCGTATGACCTGAAAAACCGTGCCAAAGCC
AGGAATGAGGGCAGCTTTGGCCGCAAATTCGTGGAAATAGCGCTGGCGCGCCGCATTACGGAACGGTACAGCAAGGACCA
GGTTCTGGAATTTTACCTGAACCGCGTTTACTTCGGCAGCGGGTTTTACGGCATCCGGGCCGCTTCCCTGGGCTACTTCG
GCAAAGAGCCGGCGGACCTGACCACCCGGGAGGCCGCCTCCATCGCCGCCCTGATCAAAAACCCGAACGGACTTTCCCCT
CTGAATAATCCGGCTAGCAATCTGAAATGGCGCAACCACGTTCTCAACCGCATGGCCAAGGAGAAATACATTACGCCGGA
TGAAGCGGAACGCCTCTCCGCCATGGAGCTGGGGCTGAATCCCAAGCCGCTGAAACGCGGCGTCTCCCACATTTACGACC
GCATTTCCTCAGAAATCACCGCATACCTGGGAGAGGAGCGCGTCAATGCCGCCGGGCTTAAAATTTACACCACCATTGAC
AGGCAGCTCCAGGAAGTTACCGGAAAAGCCCTGGAACAGGCTCTGGAAAACATTGAAAAACAACCCGGTTACCGTCATCA
GAAGGCCGCAGACTACCACAGCGGTTCCGCGAACAAGCCGCGCTATCTGGAAGGAGCGCTGCTGGTGGTGGACAACAAAT
CAGGCGCCGTCCTGGCCTACCACGGAGGCAGGGATTACACCAAGCGCCAGTATGACGCCATCAGGGACGGAGCCCGCCCC
ACCGGCACCGCCATCCTCCCTTTCCTGTACGCCACAGCCTTTGACACGGGAAAAAGCCCCGTCACCCGCATTCTGGACGA
TGCCATCGACAACCGCCTGACGGGCATCGGTGGTTCGGAAGGAATCCTGGGGGAATGGGGGGCGGAAAACTCCAAAAACC
GTTATGAAGGCATGATTACCGCCCATCGCGGCCTGTCTGCCTCCAAAATCGCCGCCTCCCTGCGCATGGGGATGGAGATG
GGCACGGCCCCGTTCGTCAAGAAGCTGACGGATTTCGGCATCCGCAAGCCCGTGAGGGAAGCGGGCAGCACGGAAGTAAA
CCCCGTTTACCGCCCCAAAATTTTCGTGGGCACGGAACCTGCCTCCCTGAAGGAAATGACGCTGGCCTACACCGCCATCC
CGAACGGGGGTTCCCGCCCTCAGGATATTTACTATCTGGACAGGATAGAAGATGAAGACGGGCAGCTGATCTGGGAATCC
ACCCAGGCGATTGAAACCCGGAACAATGCCCAGGTACGGAAGGGGGCCACATCCACAGCGACGGCCTTCCAGCTTCACAA
TATCCTGAATTCCTCCCTGAAAAACGGTTCAGCCCAGCGCATTGCCCCGCATCTGCCGAAAAACTTCAAGGGCGGCGTGA
AAACAGGCACCACGTACGACTTCGCGGACAACTGGCTGTTTGGCTATGACAGCCGCATTACCTGCGGCATCTGGGTAGGT
TTCCTGGAAGGCAAAAAGCCCATTTATCACGGAGCCTTCTCGTCAGACACCTGCGCTTCCGTGCTGGGCGCCGCCATCAC
GGAAGCGGAACGGCAGTTCCCTGCCGGAGAACTGGCCCCTCCCCCCAGCGTAGAGCGGGTGGAAATCTGCCTGACCACCG
GGAAGAGGGCCACGCACAGCTGTTATGACATTGACCCGTCGGATAAAAAATACCGCCGCCACACCATATTCGAATACCTC
CGCAAGGGGGATTCCAGCCTGCCCTTCTGCGACCTCCACGGGGAGGACATTTCTGCTCCCGTCTCCACCTTCACTGCCCA
GAACCGCATTCTTCCCCTGCCGCCCATCCTGCCCACCAGGCCCATCCTCCAGGGAGACGATCCCTACCATACGGAGCTGA
ACCAGGTCCCGGCCAACCGCAACTTTGAACTGCTGGGCGCAGGAGAAAACGTGCCGGAAGCGCAAGCCCTTTCCGCAGAT
CCCGTTTCTTCAGACCATACGGATACAAGCATTACGTTGCCGGCACCCAGGCCCATCACCATTCCCGTGCCGGAATTCAT
CCACCTGTAA

Upstream 100 bases:

>100_bases
CGGGAATCCGTTAGGATTTTTGCACGTTTTCCCCACTCCTCAGGACCAATCCTGCTTCATCTTCATGGCTGAATTAAGTT
CACAAGCTCCCCGCAGGCAC

Downstream 100 bases:

>100_bases
CTTCTTCACCTCATGCCTTCCCCATCCCAGGACACGGTAGCCTGCACTTGCCCGTCATGCGGCAACCTCTTTGCCGTGAA
GGCGTCTTTTCTGGGACGCC

Product: glycosyl transferase family 51

Products: NA

Alternate protein names: PBP-2D; PBP2d [H]

Number of amino acids: Translated: 829; Mature: 829

Protein sequence:

>829_residues
MQANKRRHPKAKPRKRFWSFIRKLVLWCLVMAAIGAAVGYFGFMMAWKRYNNWAAEFDLERINDLEKPSIIYDRNGEEIG
RIYVENRSYVTLDKISPAMINALIAQEDSRFREHPGYDFLGILRAGREYIHNSGDANQGASSITQQLARNAYDLKNRAKA
RNEGSFGRKFVEIALARRITERYSKDQVLEFYLNRVYFGSGFYGIRAASLGYFGKEPADLTTREAASIAALIKNPNGLSP
LNNPASNLKWRNHVLNRMAKEKYITPDEAERLSAMELGLNPKPLKRGVSHIYDRISSEITAYLGEERVNAAGLKIYTTID
RQLQEVTGKALEQALENIEKQPGYRHQKAADYHSGSANKPRYLEGALLVVDNKSGAVLAYHGGRDYTKRQYDAIRDGARP
TGTAILPFLYATAFDTGKSPVTRILDDAIDNRLTGIGGSEGILGEWGAENSKNRYEGMITAHRGLSASKIAASLRMGMEM
GTAPFVKKLTDFGIRKPVREAGSTEVNPVYRPKIFVGTEPASLKEMTLAYTAIPNGGSRPQDIYYLDRIEDEDGQLIWES
TQAIETRNNAQVRKGATSTATAFQLHNILNSSLKNGSAQRIAPHLPKNFKGGVKTGTTYDFADNWLFGYDSRITCGIWVG
FLEGKKPIYHGAFSSDTCASVLGAAITEAERQFPAGELAPPPSVERVEICLTTGKRATHSCYDIDPSDKKYRRHTIFEYL
RKGDSSLPFCDLHGEDISAPVSTFTAQNRILPLPPILPTRPILQGDDPYHTELNQVPANRNFELLGAGENVPEAQALSAD
PVSSDHTDTSITLPAPRPITIPVPEFIHL

Sequences:

>Translated_829_residues
MQANKRRHPKAKPRKRFWSFIRKLVLWCLVMAAIGAAVGYFGFMMAWKRYNNWAAEFDLERINDLEKPSIIYDRNGEEIG
RIYVENRSYVTLDKISPAMINALIAQEDSRFREHPGYDFLGILRAGREYIHNSGDANQGASSITQQLARNAYDLKNRAKA
RNEGSFGRKFVEIALARRITERYSKDQVLEFYLNRVYFGSGFYGIRAASLGYFGKEPADLTTREAASIAALIKNPNGLSP
LNNPASNLKWRNHVLNRMAKEKYITPDEAERLSAMELGLNPKPLKRGVSHIYDRISSEITAYLGEERVNAAGLKIYTTID
RQLQEVTGKALEQALENIEKQPGYRHQKAADYHSGSANKPRYLEGALLVVDNKSGAVLAYHGGRDYTKRQYDAIRDGARP
TGTAILPFLYATAFDTGKSPVTRILDDAIDNRLTGIGGSEGILGEWGAENSKNRYEGMITAHRGLSASKIAASLRMGMEM
GTAPFVKKLTDFGIRKPVREAGSTEVNPVYRPKIFVGTEPASLKEMTLAYTAIPNGGSRPQDIYYLDRIEDEDGQLIWES
TQAIETRNNAQVRKGATSTATAFQLHNILNSSLKNGSAQRIAPHLPKNFKGGVKTGTTYDFADNWLFGYDSRITCGIWVG
FLEGKKPIYHGAFSSDTCASVLGAAITEAERQFPAGELAPPPSVERVEICLTTGKRATHSCYDIDPSDKKYRRHTIFEYL
RKGDSSLPFCDLHGEDISAPVSTFTAQNRILPLPPILPTRPILQGDDPYHTELNQVPANRNFELLGAGENVPEAQALSAD
PVSSDHTDTSITLPAPRPITIPVPEFIHL
>Mature_829_residues
MQANKRRHPKAKPRKRFWSFIRKLVLWCLVMAAIGAAVGYFGFMMAWKRYNNWAAEFDLERINDLEKPSIIYDRNGEEIG
RIYVENRSYVTLDKISPAMINALIAQEDSRFREHPGYDFLGILRAGREYIHNSGDANQGASSITQQLARNAYDLKNRAKA
RNEGSFGRKFVEIALARRITERYSKDQVLEFYLNRVYFGSGFYGIRAASLGYFGKEPADLTTREAASIAALIKNPNGLSP
LNNPASNLKWRNHVLNRMAKEKYITPDEAERLSAMELGLNPKPLKRGVSHIYDRISSEITAYLGEERVNAAGLKIYTTID
RQLQEVTGKALEQALENIEKQPGYRHQKAADYHSGSANKPRYLEGALLVVDNKSGAVLAYHGGRDYTKRQYDAIRDGARP
TGTAILPFLYATAFDTGKSPVTRILDDAIDNRLTGIGGSEGILGEWGAENSKNRYEGMITAHRGLSASKIAASLRMGMEM
GTAPFVKKLTDFGIRKPVREAGSTEVNPVYRPKIFVGTEPASLKEMTLAYTAIPNGGSRPQDIYYLDRIEDEDGQLIWES
TQAIETRNNAQVRKGATSTATAFQLHNILNSSLKNGSAQRIAPHLPKNFKGGVKTGTTYDFADNWLFGYDSRITCGIWVG
FLEGKKPIYHGAFSSDTCASVLGAAITEAERQFPAGELAPPPSVERVEICLTTGKRATHSCYDIDPSDKKYRRHTIFEYL
RKGDSSLPFCDLHGEDISAPVSTFTAQNRILPLPPILPTRPILQGDDPYHTELNQVPANRNFELLGAGENVPEAQALSAD
PVSSDHTDTSITLPAPRPITIPVPEFIHL

Specific function: Involved in the polymerization and cross-linking of spore peptidoglycan. May be required for synthesis of the spore germ cell wall, the first layer of peptidoglycan synthesized on the surface of the inner forespore membrane [H]

COG id: COG0744

COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the transpeptidase family [H]

Homologues:

Organism=Escherichia coli, GI87082258, Length=334, Percent_Identity=35.0299401197605, Blast_Score=168, Evalue=1e-42,
Organism=Escherichia coli, GI1786343, Length=584, Percent_Identity=27.9109589041096, Blast_Score=162, Evalue=6e-41,
Organism=Escherichia coli, GI1788867, Length=636, Percent_Identity=24.8427672955975, Blast_Score=143, Evalue=5e-35,
Organism=Escherichia coli, GI1789601, Length=155, Percent_Identity=40, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001264
- InterPro:   IPR011816
- InterPro:   IPR001460 [H]

Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]

EC number: 2.4.2.-; 3.4.-.- [C]

Molecular weight: Translated: 92194; Mature: 92194

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQANKRRHPKAKPRKRFWSFIRKLVLWCLVMAAIGAAVGYFGFMMAWKRYNNWAAEFDLE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHH
RINDLEKPSIIYDRNGEEIGRIYVENRSYVTLDKISPAMINALIAQEDSRFREHPGYDFL
HHCCCCCCCEEECCCCCEEEEEEECCCCEEEHHCCCHHHHHHHHHHHHHHHHHCCCCHHH
GILRAGREYIHNSGDANQGASSITQQLARNAYDLKNRAKARNEGSFGRKFVEIALARRIT
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ERYSKDQVLEFYLNRVYFGSGFYGIRAASLGYFGKEPADLTTREAASIAALIKNPNGLSP
HHHCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
LNNPASNLKWRNHVLNRMAKEKYITPDEAERLSAMELGLNPKPLKRGVSHIYDRISSEIT
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AYLGEERVNAAGLKIYTTIDRQLQEVTGKALEQALENIEKQPGYRHQKAADYHSGSANKP
HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCC
RYLEGALLVVDNKSGAVLAYHGGRDYTKRQYDAIRDGARPTGTAILPFLYATAFDTGKSP
CEECCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCH
VTRILDDAIDNRLTGIGGSEGILGEWGAENSKNRYEGMITAHRGLSASKIAASLRMGMEM
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCEEEECCCCCHHHHHHHHHHHHHC
GTAPFVKKLTDFGIRKPVREAGSTEVNPVYRPKIFVGTEPASLKEMTLAYTAIPNGGSRP
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEECCCCCCHHHHEEEEEECCCCCCCC
QDIYYLDRIEDEDGQLIWESTQAIETRNNAQVRKGATSTATAFQLHNILNSSLKNGSAQR
CCEEEEECCCCCCCCEEECCHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHH
IAPHLPKNFKGGVKTGTTYDFADNWLFGYDSRITCGIWVGFLEGKKPIYHGAFSSDTCAS
HCCCCCCCCCCCCCCCCEEECCCCCEECCCCEEEEEEEEEECCCCCCEEECCCCCHHHHH
VLGAAITEAERQFPAGELAPPPSVERVEICLTTGKRATHSCYDIDPSDKKYRRHTIFEYL
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHH
RKGDSSLPFCDLHGEDISAPVSTFTAQNRILPLPPILPTRPILQGDDPYHTELNQVPANR
HCCCCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
NFELLGAGENVPEAQALSADPVSSDHTDTSITLPAPRPITIPVPEFIHL
CEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCHHHHCC
>Mature Secondary Structure
MQANKRRHPKAKPRKRFWSFIRKLVLWCLVMAAIGAAVGYFGFMMAWKRYNNWAAEFDLE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHH
RINDLEKPSIIYDRNGEEIGRIYVENRSYVTLDKISPAMINALIAQEDSRFREHPGYDFL
HHCCCCCCCEEECCCCCEEEEEEECCCCEEEHHCCCHHHHHHHHHHHHHHHHHCCCCHHH
GILRAGREYIHNSGDANQGASSITQQLARNAYDLKNRAKARNEGSFGRKFVEIALARRIT
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
ERYSKDQVLEFYLNRVYFGSGFYGIRAASLGYFGKEPADLTTREAASIAALIKNPNGLSP
HHHCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
LNNPASNLKWRNHVLNRMAKEKYITPDEAERLSAMELGLNPKPLKRGVSHIYDRISSEIT
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AYLGEERVNAAGLKIYTTIDRQLQEVTGKALEQALENIEKQPGYRHQKAADYHSGSANKP
HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCC
RYLEGALLVVDNKSGAVLAYHGGRDYTKRQYDAIRDGARPTGTAILPFLYATAFDTGKSP
CEECCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCH
VTRILDDAIDNRLTGIGGSEGILGEWGAENSKNRYEGMITAHRGLSASKIAASLRMGMEM
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCEEEECCCCCHHHHHHHHHHHHHC
GTAPFVKKLTDFGIRKPVREAGSTEVNPVYRPKIFVGTEPASLKEMTLAYTAIPNGGSRP
CCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEECCCCCCHHHHEEEEEECCCCCCCC
QDIYYLDRIEDEDGQLIWESTQAIETRNNAQVRKGATSTATAFQLHNILNSSLKNGSAQR
CCEEEEECCCCCCCCEEECCHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHH
IAPHLPKNFKGGVKTGTTYDFADNWLFGYDSRITCGIWVGFLEGKKPIYHGAFSSDTCAS
HCCCCCCCCCCCCCCCCEEECCCCCEECCCCEEEEEEEEEECCCCCCEEECCCCCHHHHH
VLGAAITEAERQFPAGELAPPPSVERVEICLTTGKRATHSCYDIDPSDKKYRRHTIFEYL
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHH
RKGDSSLPFCDLHGEDISAPVSTFTAQNRILPLPPILPTRPILQGDDPYHTELNQVPANR
HCCCCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCC
NFELLGAGENVPEAQALSADPVSSDHTDTSITLPAPRPITIPVPEFIHL
CEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]