| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is thiL [H]
Identifier: 187735098
GI number: 187735098
Start: 701509
End: 702405
Strand: Direct
Name: thiL [H]
Synonym: Amuc_0592
Alternate gene names: 187735098
Gene position: 701509-702405 (Clockwise)
Preceding gene: 187735097
Following gene: 187735100
Centisome position: 26.33
GC content: 65.44
Gene sequence:
>897_bases ATGGAACCTGAGCCCAGCATCCGGCAGATGGGAGAGGATGCGCTGGTAGCCCGCCTCCTTCCCCTGATGCCTTCCAATCC GTCCCTGGAGACGGGGCCGGGAGACGATTGCGCCATAATCCGGGGGTCAGGAAACCGTCAGCTGCTCCTGAAAACGGACT GCGTGGTGGAAGGCATGCATTTCCTGCCCGGAACGGACCCGGAACTGATCGGGAGGAAGGCGCTGGCACGGGCCGTTTCA GACATAGGGGCCATGGGCGGCACGCCCCTTCACGCACTGGTGACCCTGTTCGTGCACGCAGACCGCCCCATCTCCCAAGT GGAAGGAATTTACCGCGGCATGGGGCGGCTGGCACGGCAGTTCGGCATCAGCATCGCCGGGGGGGAAAGCTCCGGCCTGC CCGCGGACGGGCTCATCATCAACGTGGCGCTGACCGGAGAAGTGGAGGCAGGCAAAGCCGTACTGCGCAGCACGGCGCGG GCGGGGGATCTGATTGCCGTAACGGGAACGCTCGGCGGCAGCTTCCCCACCGGCCACCATCTTTCCTTCACGCCGCGTGT CAGGGAAGGAGGCATCCTGGCCGCCTCCGGCGTAGCCACCTCCATGATGGATCTTTCCGACGGGCTGGGAACCGACCTCC CCCGGCTGGCGGCCGCCTCCGGGCTTGGGTTCCGTATTCATGAAGAGCTTCTTCCCGTGCGCCCGGGGTTTACTGCGGCC CAGGCTGTAGGGGATGGGGAGGATTACGAATTGCTGGTGACCTTCCGTCCCGGCGACCGAGAACGGGCGGCACGACTGGC CGCGGAGCATTTTCCGGAAACGCCTCTCACCGTCATCGGGGAAATGACTGCGGAAACGGCCTCCGCCCTTCCCCCAGGTT ACAGGCACTTCAGCTAG
Upstream 100 bases:
>100_bases TACGAATACACGGGCAGCATCTGGACGCCCATCATCGCCCATTGCATTTTCAACACCGCCACTCTCATCAACATTCTGTA TCCCGGCATCCTTCTTCCGT
Downstream 100 bases:
>100_bases CCCGTTAAGAACCGGGGGCAGAGCCACGCAAAACGCCTGCGGAATTATTCCGCCGCCTTTTCCTCCTCTTTCTCCCGCTG CATGTAAGGCAGGAGCTGTT
Product: thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MEPEPSIRQMGEDALVARLLPLMPSNPSLETGPGDDCAIIRGSGNRQLLLKTDCVVEGMHFLPGTDPELIGRKALARAVS DIGAMGGTPLHALVTLFVHADRPISQVEGIYRGMGRLARQFGISIAGGESSGLPADGLIINVALTGEVEAGKAVLRSTAR AGDLIAVTGTLGGSFPTGHHLSFTPRVREGGILAASGVATSMMDLSDGLGTDLPRLAAASGLGFRIHEELLPVRPGFTAA QAVGDGEDYELLVTFRPGDRERAARLAAEHFPETPLTVIGEMTAETASALPPGYRHFS
Sequences:
>Translated_298_residues MEPEPSIRQMGEDALVARLLPLMPSNPSLETGPGDDCAIIRGSGNRQLLLKTDCVVEGMHFLPGTDPELIGRKALARAVS DIGAMGGTPLHALVTLFVHADRPISQVEGIYRGMGRLARQFGISIAGGESSGLPADGLIINVALTGEVEAGKAVLRSTAR AGDLIAVTGTLGGSFPTGHHLSFTPRVREGGILAASGVATSMMDLSDGLGTDLPRLAAASGLGFRIHEELLPVRPGFTAA QAVGDGEDYELLVTFRPGDRERAARLAAEHFPETPLTVIGEMTAETASALPPGYRHFS >Mature_298_residues MEPEPSIRQMGEDALVARLLPLMPSNPSLETGPGDDCAIIRGSGNRQLLLKTDCVVEGMHFLPGTDPELIGRKALARAVS DIGAMGGTPLHALVTLFVHADRPISQVEGIYRGMGRLARQFGISIAGGESSGLPADGLIINVALTGEVEAGKAVLRSTAR AGDLIAVTGTLGGSFPTGHHLSFTPRVREGGILAASGVATSMMDLSDGLGTDLPRLAAASGLGFRIHEELLPVRPGFTAA QAVGDGEDYELLVTFRPGDRERAARLAAEHFPETPLTVIGEMTAETASALPPGYRHFS
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=329, Percent_Identity=33.434650455927, Blast_Score=122, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 31089; Mature: 31089
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPEPSIRQMGEDALVARLLPLMPSNPSLETGPGDDCAIIRGSGNRQLLLKTDCVVEGMH CCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECHHHHCHH FLPGTDPELIGRKALARAVSDIGAMGGTPLHALVTLFVHADRPISQVEGIYRGMGRLARQ CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FGISIAGGESSGLPADGLIINVALTGEVEAGKAVLRSTARAGDLIAVTGTLGGSFPTGHH HCCEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC LSFTPRVREGGILAASGVATSMMDLSDGLGTDLPRLAAASGLGFRIHEELLPVRPGFTAA EEECCCCCCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCEEEHHHHCCCCCCCHHH QAVGDGEDYELLVTFRPGDRERAARLAAEHFPETPLTVIGEMTAETASALPPGYRHFS HHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MEPEPSIRQMGEDALVARLLPLMPSNPSLETGPGDDCAIIRGSGNRQLLLKTDCVVEGMH CCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECHHHHCHH FLPGTDPELIGRKALARAVSDIGAMGGTPLHALVTLFVHADRPISQVEGIYRGMGRLARQ CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH FGISIAGGESSGLPADGLIINVALTGEVEAGKAVLRSTARAGDLIAVTGTLGGSFPTGHH HCCEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC LSFTPRVREGGILAASGVATSMMDLSDGLGTDLPRLAAASGLGFRIHEELLPVRPGFTAA EEECCCCCCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCEEEHHHHCCCCCCCHHH QAVGDGEDYELLVTFRPGDRERAARLAAEHFPETPLTVIGEMTAETASALPPGYRHFS HHCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377; 8419296 [H]