| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is cmk [H]
Identifier: 187735100
GI number: 187735100
Start: 704430
End: 705071
Strand: Direct
Name: cmk [H]
Synonym: Amuc_0594
Alternate gene names: 187735100
Gene position: 704430-705071 (Clockwise)
Preceding gene: 187735098
Following gene: 187735101
Centisome position: 26.44
GC content: 62.46
Gene sequence:
>642_bases ATGCATCCAGCCATCGCCATTGACGGCCCCGCCGCCTCCGGAAAATCCACCGTCGCCAAGCTCATCGCGGACCGCCTCGG CTATACGTTCATCAACACCGGGGCCATGTACCGGGCCGTTACCTGGTACATGCTGGAACAGGGCATCAACCCTGCGGACA CGGCGGCCGTGCTGGAATCCCTGCCGTCCGTGCCTCTCTCCTTCGGCAAGGACGGCAGCCGATCCGTAGTTCTGTACGGA CAGCATGTGCTGGGCGAAGAACTCACGAGCCGGCAGGTCAACGACCACGTTTCCACCATTGCGGCCATCCCGGAAGTACG CGCCCTGCTGGTGGAACGGCAGCGGGAATATAACCGCCGGGAACCCGTCGTGATGGAAGGCAGGGACATAGGCACCGTGG TTTTTCCGGATACGCCGTTCAAGTACTTCGTCACCGCATCCGAGGAAGTGAGGGCCGCGCGCCGCGCTGCGGAGGGACTG ACGGACTCTATCGCGGAACGGGACCGCAAGGATTCCTCCCGCGCCACCGCCCCGCTGGCGCAGGCGCCTGACGCTCTTCT GGTGGATACGTCAGACATGACGATTGACCAGGTCGTCCGTTTCATCACCGACAACATCCAACAAAAACTCTCCTCCAGAT GA
Upstream 100 bases:
>100_bases TCTTTTTGCAACGCCCTTCGGAACGCAGTCTTGATTTCCACAGGGCTCAAAGCTACAATTCAAACGGCTTTAGCCCCCAT TTCCAACTCAGAAGACACTC
Downstream 100 bases:
>100_bases ACTCTTTCTACTGGGTTTTCTACACGCTCTTCAAAAGCATTTCCAAAGCCTTCTTCTCCTGGAAAGTCGTCAACCGGGAA AAACTCATCGAAGACGGCCC
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MHPAIAIDGPAASGKSTVAKLIADRLGYTFINTGAMYRAVTWYMLEQGINPADTAAVLESLPSVPLSFGKDGSRSVVLYG QHVLGEELTSRQVNDHVSTIAAIPEVRALLVERQREYNRREPVVMEGRDIGTVVFPDTPFKYFVTASEEVRAARRAAEGL TDSIAERDRKDSSRATAPLAQAPDALLVDTSDMTIDQVVRFITDNIQQKLSSR
Sequences:
>Translated_213_residues MHPAIAIDGPAASGKSTVAKLIADRLGYTFINTGAMYRAVTWYMLEQGINPADTAAVLESLPSVPLSFGKDGSRSVVLYG QHVLGEELTSRQVNDHVSTIAAIPEVRALLVERQREYNRREPVVMEGRDIGTVVFPDTPFKYFVTASEEVRAARRAAEGL TDSIAERDRKDSSRATAPLAQAPDALLVDTSDMTIDQVVRFITDNIQQKLSSR >Mature_213_residues MHPAIAIDGPAASGKSTVAKLIADRLGYTFINTGAMYRAVTWYMLEQGINPADTAAVLESLPSVPLSFGKDGSRSVVLYG QHVLGEELTSRQVNDHVSTIAAIPEVRALLVERQREYNRREPVVMEGRDIGTVVFPDTPFKYFVTASEEVRAARRAAEGL TDSIAERDRKDSSRATAPLAQAPDALLVDTSDMTIDQVVRFITDNIQQKLSSR
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787139, Length=221, Percent_Identity=36.6515837104072, Blast_Score=139, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003136 - InterPro: IPR011994 [H]
Pfam domain/function: PF02224 Cytidylate_kin [H]
EC number: =2.7.4.14 [H]
Molecular weight: Translated: 23306; Mature: 23306
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPAIAIDGPAASGKSTVAKLIADRLGYTFINTGAMYRAVTWYMLEQGINPADTAAVLES CCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH LPSVPLSFGKDGSRSVVLYGQHVLGEELTSRQVNDHVSTIAAIPEVRALLVERQREYNRR CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EPVVMEGRDIGTVVFPDTPFKYFVTASEEVRAARRAAEGLTDSIAERDRKDSSRATAPLA CCEEECCCCCCEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHH QAPDALLVDTSDMTIDQVVRFITDNIQQKLSSR CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHPAIAIDGPAASGKSTVAKLIADRLGYTFINTGAMYRAVTWYMLEQGINPADTAAVLES CCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH LPSVPLSFGKDGSRSVVLYGQHVLGEELTSRQVNDHVSTIAAIPEVRALLVERQREYNRR CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EPVVMEGRDIGTVVFPDTPFKYFVTASEEVRAARRAAEGLTDSIAERDRKDSSRATAPLA CCEEECCCCCCEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHH QAPDALLVDTSDMTIDQVVRFITDNIQQKLSSR CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12566566 [H]