| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
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The map label for this gene is 187735097
Identifier: 187735097
GI number: 187735097
Start: 700656
End: 701519
Strand: Direct
Name: 187735097
Synonym: Amuc_0591
Alternate gene names: NA
Gene position: 700656-701519 (Clockwise)
Preceding gene: 187735092
Following gene: 187735098
Centisome position: 26.3
GC content: 56.71
Gene sequence:
>864_bases ATGAATGAATTAACGGACCAGCTCATTACCCTGTTCTCTTCCATCCTGATTACCGTCATGTTCCTCGCCGTGGCGGTAAA CATATTCCGCCGGAATCATGCGCCTGATACCCGGCATCCGCTGAAATGGCGTATTCCCGTAGGCCATCTGGACATGCTGG ACATCGCCATGTGCGGCATCATTGTGCTTTACTTCAGCCTGGGGGCCCTGTTGGCGGCAGCCACGCCTCCGGGGGCTTCC GCTCCGCCCAGCACAACCAACATGGAGCTGGACAGCTACAAGGTTTTCAACGGAACCTGCCTGAATCTCATTCTGGCCTT CGTCCTGCTGGTGCGCATGTTCCATACGGGCCGGATGGAGGCGCTGGGATTGAAAAAACATTCCCTGAAGGTCCTCCTCT ACGCTCCGGCGGCAGGTTATCTGCTGGTGCTGGCCATCCACTTCCTGCTGGACAAGGCGGGCCTGTTCCAGTGGATTGAA CACGCCACCAACGCCCCGGCCGAACAATCCATTGTTTCCGTGCTGAGGCACTCCAGCGACATTCCCCTGATCACGGTTAT CTGCTTCAGCGCCGCCATCGCCGCCCCTCTGGTGGAGGAACTTATTTTCCGCGGTTATCTGTACCCGATCATGAAAAAAT ACACGGGCGTCTGGTTTGCCCTGATCACCACCTCCCTCCTCTTCGGCATCATCCACGTCAGCCTGGTTCCGTTCATCCCC CTGGCAATCTTCGGAGCCGTACTGGTGCTGCTGTACGAATACACGGGCAGCATCTGGACGCCCATCATCGCCCATTGCAT TTTCAACACCGCCACTCTCATCAACATTCTGTATCCCGGCATCCTTCTTCCGTATGGAACCTGA
Upstream 100 bases:
>100_bases TTTTCTGCTGGAAAATCACCGTGTTTCCACTAAAGAGACAGGAGCTTTTCTTCCGGCGCGGTACTCTGGAAGGGCGGCCC ATTCCACACATGCCTATTCC
Downstream 100 bases:
>100_bases GCCCAGCATCCGGCAGATGGGAGAGGATGCGCTGGTAGCCCGCCTCCTTCCCCTGATGCCTTCCAATCCGTCCCTGGAGA CGGGGCCGGGAGACGATTGC
Product: Abortive infection protein
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family; CAAX Amino Terminal Protease Family Protein; Metal-Dependent Membrane Protease; CAAX Amino Protease
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MNELTDQLITLFSSILITVMFLAVAVNIFRRNHAPDTRHPLKWRIPVGHLDMLDIAMCGIIVLYFSLGALLAAATPPGAS APPSTTNMELDSYKVFNGTCLNLILAFVLLVRMFHTGRMEALGLKKHSLKVLLYAPAAGYLLVLAIHFLLDKAGLFQWIE HATNAPAEQSIVSVLRHSSDIPLITVICFSAAIAAPLVEELIFRGYLYPIMKKYTGVWFALITTSLLFGIIHVSLVPFIP LAIFGAVLVLLYEYTGSIWTPIIAHCIFNTATLINILYPGILLPYGT
Sequences:
>Translated_287_residues MNELTDQLITLFSSILITVMFLAVAVNIFRRNHAPDTRHPLKWRIPVGHLDMLDIAMCGIIVLYFSLGALLAAATPPGAS APPSTTNMELDSYKVFNGTCLNLILAFVLLVRMFHTGRMEALGLKKHSLKVLLYAPAAGYLLVLAIHFLLDKAGLFQWIE HATNAPAEQSIVSVLRHSSDIPLITVICFSAAIAAPLVEELIFRGYLYPIMKKYTGVWFALITTSLLFGIIHVSLVPFIP LAIFGAVLVLLYEYTGSIWTPIIAHCIFNTATLINILYPGILLPYGT >Mature_287_residues MNELTDQLITLFSSILITVMFLAVAVNIFRRNHAPDTRHPLKWRIPVGHLDMLDIAMCGIIVLYFSLGALLAAATPPGAS APPSTTNMELDSYKVFNGTCLNLILAFVLLVRMFHTGRMEALGLKKHSLKVLLYAPAAGYLLVLAIHFLLDKAGLFQWIE HATNAPAEQSIVSVLRHSSDIPLITVICFSAAIAAPLVEELIFRGYLYPIMKKYTGVWFALITTSLLFGIIHVSLVPFIP LAIFGAVLVLLYEYTGSIWTPIIAHCIFNTATLINILYPGILLPYGT
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31607; Mature: 31607
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELTDQLITLFSSILITVMFLAVAVNIFRRNHAPDTRHPLKWRIPVGHLDMLDIAMCGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHH IVLYFSLGALLAAATPPGASAPPSTTNMELDSYKVFNGTCLNLILAFVLLVRMFHTGRME HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHH ALGLKKHSLKVLLYAPAAGYLLVLAIHFLLDKAGLFQWIEHATNAPAEQSIVSVLRHSSD HHCCCHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC IPLITVICFSAAIAAPLVEELIFRGYLYPIMKKYTGVWFALITTSLLFGIIHVSLVPFIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAIFGAVLVLLYEYTGSIWTPIIAHCIFNTATLINILYPGILLPYGT HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNELTDQLITLFSSILITVMFLAVAVNIFRRNHAPDTRHPLKWRIPVGHLDMLDIAMCGI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHH IVLYFSLGALLAAATPPGASAPPSTTNMELDSYKVFNGTCLNLILAFVLLVRMFHTGRME HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCHH ALGLKKHSLKVLLYAPAAGYLLVLAIHFLLDKAGLFQWIEHATNAPAEQSIVSVLRHSSD HHCCCHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC IPLITVICFSAAIAAPLVEELIFRGYLYPIMKKYTGVWFALITTSLLFGIIHVSLVPFIP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAIFGAVLVLLYEYTGSIWTPIIAHCIFNTATLINILYPGILLPYGT HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA