Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is yfkF [H]

Identifier: 186477182

GI number: 186477182

Start: 2735347

End: 2736504

Strand: Direct

Name: yfkF [H]

Synonym: Bphy_2433

Alternate gene names: 186477182

Gene position: 2735347-2736504 (Clockwise)

Preceding gene: 186477181

Following gene: 186477185

Centisome position: 78.62

GC content: 67.96

Gene sequence:

>1158_bases
ATGAAAGTCGTCTTCTCCCGTGATTTCCTCGCGCTGATCCTGAGCGTGGCCGTCGTCGGCCTCGGCAGCGGCGCGACGCT
TCCTCTCACTGCCCTCGCGCTGACGCAGGCGGGCTACGGCACCGACGTGGTCGGCCTGCTGACGGCCGCGCAGGCGGGCG
GCGGCCTGCTGGTGGTGCCCGTCGCCGGCTGGATCGCGGCGCGCTGCGGCGGCCGTCACGCGATCATCGGCTCGGTGCTG
GTCGTCGCAATCGCCACCGCGCTGATGCAGGTGAGCGCCAATCTGTTCGTCTGGGGCGTGCTGCGCGTGCTGTGCGGCGT
GGCGCTGATGCTGCTCTTCACGATCGGCGAGGCATGGGTCAACCAGCTCGCCGACGATGCATCGCGAGGCCGCGTCGTCG
CCATCTACGCAACGAACTTCACGCTGTTCCAGATGGCAGGCCCCGTGCTCGTCAGTCAGATCGCGCAGTACGACGATTGG
CGCTTCCTGATTTGCGGCGCGATCTTTCTGATCGCGTTGCCCGTGCTGTCGATGATCCGCTCCGCGCCTCACGCATCCGA
CGAACATGAGCCGCATGGCAACTGGCGCCGCGTGCTGCCGCAGATGCCTGCGCTCGTGGTCGGGACCGGCTTTTTCGCGC
TGTTCGATACCATCGCGCTGTCGCTGATGCCGCTCTTCGCGATGGCGCATGGCATGTCCAGTGAAGTGGCCGTGCTGTTC
GCGTCAGCGCTGCTGCTCGGCGACACGACGATGCAGTTTCCCATCGGCTGGCTCGCGGATCACCTGGGGCGCGAGCGTGT
GCATATCGGCTGCGCGGTGCTCGTCGTCGTGTTGCTGCCGCTGCTGCCTTGGGCCGTGCAGTCACCGTGGCTGTGCTGGC
CGCTGCTGTATGTGCTGGGCGCGGCGGCGGGCGCGATCTACACGCTGTCGCTCGTGGCCTGCGGCGAGCGCTTTCGCGGT
GTGGCGCTGGTGTCGGCGAGCTCGCTCGTCGGTGCGTCGTGGAGTATCGCGAGTTTCGGCGGGCCGCTCGTAGCGGGCGC
CTTGATGAAGAGCGTCGGCAACGACGCGATGATCGGCGTCGTGCTCGCGAGCGCGTTGGCGTTTCTCGCGGCGATGCTGT
GGGAAAAAAGACGCGGCGTGGCGCGCGCCGCGTCCTGA

Upstream 100 bases:

>100_bases
GGCGTTTGCGTGCAGCGGGCTGAGCGGCCAATCGCGCATGGCCGTCATCAGAGAGCCCCGATGATGCCAATGACAGACGG
GCGGTGTAGCATCTCGCCCG

Downstream 100 bases:

>100_bases
TTTCGCGGGCGATTCAGCGCTGCGCCGGCACGATCTCGCCGACGCACGTGCCAAAGCCGACGCGATAGCCGTCGCCCTGG
CACCATCCGGCGAGCGTGAG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKVVFSRDFLALILSVAVVGLGSGATLPLTALALTQAGYGTDVVGLLTAAQAGGGLLVVPVAGWIAARCGGRHAIIGSVL
VVAIATALMQVSANLFVWGVLRVLCGVALMLLFTIGEAWVNQLADDASRGRVVAIYATNFTLFQMAGPVLVSQIAQYDDW
RFLICGAIFLIALPVLSMIRSAPHASDEHEPHGNWRRVLPQMPALVVGTGFFALFDTIALSLMPLFAMAHGMSSEVAVLF
ASALLLGDTTMQFPIGWLADHLGRERVHIGCAVLVVVLLPLLPWAVQSPWLCWPLLYVLGAAAGAIYTLSLVACGERFRG
VALVSASSLVGASWSIASFGGPLVAGALMKSVGNDAMIGVVLASALAFLAAMLWEKRRGVARAAS

Sequences:

>Translated_385_residues
MKVVFSRDFLALILSVAVVGLGSGATLPLTALALTQAGYGTDVVGLLTAAQAGGGLLVVPVAGWIAARCGGRHAIIGSVL
VVAIATALMQVSANLFVWGVLRVLCGVALMLLFTIGEAWVNQLADDASRGRVVAIYATNFTLFQMAGPVLVSQIAQYDDW
RFLICGAIFLIALPVLSMIRSAPHASDEHEPHGNWRRVLPQMPALVVGTGFFALFDTIALSLMPLFAMAHGMSSEVAVLF
ASALLLGDTTMQFPIGWLADHLGRERVHIGCAVLVVVLLPLLPWAVQSPWLCWPLLYVLGAAAGAIYTLSLVACGERFRG
VALVSASSLVGASWSIASFGGPLVAGALMKSVGNDAMIGVVLASALAFLAAMLWEKRRGVARAAS
>Mature_385_residues
MKVVFSRDFLALILSVAVVGLGSGATLPLTALALTQAGYGTDVVGLLTAAQAGGGLLVVPVAGWIAARCGGRHAIIGSVL
VVAIATALMQVSANLFVWGVLRVLCGVALMLLFTIGEAWVNQLADDASRGRVVAIYATNFTLFQMAGPVLVSQIAQYDDW
RFLICGAIFLIALPVLSMIRSAPHASDEHEPHGNWRRVLPQMPALVVGTGFFALFDTIALSLMPLFAMAHGMSSEVAVLF
ASALLLGDTTMQFPIGWLADHLGRERVHIGCAVLVVVLLPLLPWAVQSPWLCWPLLYVLGAAAGAIYTLSLVACGERFRG
VALVSASSLVGASWSIASFGGPLVAGALMKSVGNDAMIGVVLASALAFLAAMLWEKRRGVARAAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40273; Mature: 40273

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVFSRDFLALILSVAVVGLGSGATLPLTALALTQAGYGTDVVGLLTAAQAGGGLLVVP
CCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEE
VAGWIAARCGGRHAIIGSVLVVAIATALMQVSANLFVWGVLRVLCGVALMLLFTIGEAWV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQLADDASRGRVVAIYATNFTLFQMAGPVLVSQIAQYDDWRFLICGAIFLIALPVLSMIR
HHHHHHCCCCCEEEEEECCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SAPHASDEHEPHGNWRRVLPQMPALVVGTGFFALFDTIALSLMPLFAMAHGMSSEVAVLF
CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ASALLLGDTTMQFPIGWLADHLGRERVHIGCAVLVVVLLPLLPWAVQSPWLCWPLLYVLG
HHHHHHCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AAAGAIYTLSLVACGERFRGVALVSASSLVGASWSIASFGGPLVAGALMKSVGNDAMIGV
HHHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCHHHHH
VLASALAFLAAMLWEKRRGVARAAS
HHHHHHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MKVVFSRDFLALILSVAVVGLGSGATLPLTALALTQAGYGTDVVGLLTAAQAGGGLLVVP
CCEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEE
VAGWIAARCGGRHAIIGSVLVVAIATALMQVSANLFVWGVLRVLCGVALMLLFTIGEAWV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQLADDASRGRVVAIYATNFTLFQMAGPVLVSQIAQYDDWRFLICGAIFLIALPVLSMIR
HHHHHHCCCCCEEEEEECCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
SAPHASDEHEPHGNWRRVLPQMPALVVGTGFFALFDTIALSLMPLFAMAHGMSSEVAVLF
CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ASALLLGDTTMQFPIGWLADHLGRERVHIGCAVLVVVLLPLLPWAVQSPWLCWPLLYVLG
HHHHHHCCCHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AAAGAIYTLSLVACGERFRGVALVSASSLVGASWSIASFGGPLVAGALMKSVGNDAMIGV
HHHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCHHHHH
VLASALAFLAAMLWEKRRGVARAAS
HHHHHHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]