Definition Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence.
Accession NC_010622
Length 3,479,187

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The map label for this gene is groES [H]

Identifier: 186477085

GI number: 186477085

Start: 2617578

End: 2617868

Strand: Reverse

Name: groES [H]

Synonym: Bphy_2334

Alternate gene names: 186477085

Gene position: 2617868-2617578 (Counterclockwise)

Preceding gene: 186477087

Following gene: 186477084

Centisome position: 75.24

GC content: 59.45

Gene sequence:

>291_bases
ATGAACCTTCGTCCTTTGCATGATCGCGTGATCGTCAAGCGTCTGGATCAGGAAACCAAGACCGCATCGGGCATCGTGAT
TCCCGACGCAGCCGCAGAAAAGCCGGATCAAGGCGAAGTGCTGGCTGTCGGCCCGGGCAAGCGTGACGACAAGGGCGCTC
CCATTGCGCTCGACGTGAAGGTCGGCGACCGCGTCCTGTTCGGCAAGTACGCAGGCCAGACCGTCAAGGTCGACGGCAAC
GAACTGCTGGTGATGCGCGAAGAAGACATCATGGCCGTTGTCAACAAGTAA

Upstream 100 bases:

>100_bases
TTAGCACTCACCGCACGAGAGTGCTAACAACTTCGCCGGTTGGCGTCGCCAGCTGGCATATCTCAGCGTTCTTCAGTCCC
AATCAAGAGAGGATCTATCC

Downstream 100 bases:

>100_bases
GCACTTGTTACCGGTTCATTCTCACGAATTCAAGGAGTTAGAAGATGGCAGCTAAAGACGTCGTGTTCGGCGATTCCGCC
CGTGCCAAGATGGTTGAAGG

Product: co-chaperonin GroES

Products: NA

Alternate protein names: GroES protein; Protein Cpn10 [H]

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MNLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAVGPGKRDDKGAPIALDVKVGDRVLFGKYAGQTVKVDGN
ELLVMREEDIMAVVNK

Sequences:

>Translated_96_residues
MNLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAVGPGKRDDKGAPIALDVKVGDRVLFGKYAGQTVKVDGN
ELLVMREEDIMAVVNK
>Mature_96_residues
MNLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAVGPGKRDDKGAPIALDVKVGDRVLFGKYAGQTVKVDGN
ELLVMREEDIMAVVNK

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family [H]

Homologues:

Organism=Escherichia coli, GI1790585, Length=95, Percent_Identity=54.7368421052632, Blast_Score=96, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17555568, Length=94, Percent_Identity=41.4893617021277, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6324594, Length=96, Percent_Identity=41.6666666666667, Blast_Score=80, Evalue=8e-17,
Organism=Drosophila melanogaster, GI21356029, Length=91, Percent_Identity=45.0549450549451, Blast_Score=75, Evalue=9e-15,
Organism=Drosophila melanogaster, GI21358317, Length=90, Percent_Identity=44.4444444444444, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032 [H]

Pfam domain/function: PF00166 Cpn10 [H]

EC number: NA

Molecular weight: Translated: 10391; Mature: 10391

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS00681 CHAPERONINS_CPN10

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAVGPGKRDDKGAPIALDVK
CCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEE
VGDRVLFGKYAGQTVKVDGNELLVMREEDIMAVVNK
ECCEEEEECCCCCEEEECCCEEEEEECCCEEEEECC
>Mature Secondary Structure
MNLRPLHDRVIVKRLDQETKTASGIVIPDAAAEKPDQGEVLAVGPGKRDDKGAPIALDVK
CCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEE
VGDRVLFGKYAGQTVKVDGNELLVMREEDIMAVVNK
ECCEEEEECCCCCEEEECCCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA