| Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010622 |
| Length | 3,479,187 |
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The map label for this gene is 186475586
Identifier: 186475586
GI number: 186475586
Start: 922147
End: 922539
Strand: Direct
Name: 186475586
Synonym: Bphy_0821
Alternate gene names: NA
Gene position: 922147-922539 (Clockwise)
Preceding gene: 186475585
Following gene: 186475587
Centisome position: 26.5
GC content: 64.63
Gene sequence:
>393_bases ATGACGGACGCTGCGCTCGAACCGGTGCGCGTGTGCGCGTCGGAGGAACTCGTGGACGGCGGCGCGGGCGTTCGCATCGA CGCGACGCACGCAGGCGGCGATGCTGTGGTGTTTTTTGTCCGCTATGACGGCGTTGCCTATGGTTATCTGAACCGGTGCG CGCACGTGCCGATGGAACTGGACTGGAACGAGGGACAGTTCTTCGAGTCGTCGGGCCTATACTTGATGTGCGCGACACAT GGTGCGATTTACGCGCCAGATACAGGCAAATGTGTGGGTGGACCGTGCCGCGGCGGCAGGCTTCGGCCGCTGCACGTCGC CGAGCGCGATACCCCGGGAGGCCGTGCCGTATTTTGGCTGCCCGAAGCTGATCTGCGTCCGGCGTCTGCCTGA
Upstream 100 bases:
>100_bases TCACTTATGGCGCGCATCCCGCCCGTTCGCTGGCGGCGCTGGAACCGAAATTCGTCGCGGACAGCATCGCATCGCTGTCG GGCTGGCTGCGGGAGCACGC
Downstream 100 bases:
>100_bases TTTCCCCGCAGTCTTTCCCAACTCGATTTCAATCGGCGGCAACGCATGTCCGACAATCTGACTCCCGATCCGAAGGAACC TGCTGCGGCGAGCCGTGAAG
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: Rieske Region; Rieske Domain-Containing Protein; Rieske Protein; Ferredoxin; Rieske; Rieske Iron-Sulfur Domain Protein; Ferredoxin Protein; Nitrite Reductase Ferredoxin Subunit; Rieske Iron-Sulfur Domain-Containing Protein
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTDAALEPVRVCASEELVDGGAGVRIDATHAGGDAVVFFVRYDGVAYGYLNRCAHVPMELDWNEGQFFESSGLYLMCATH GAIYAPDTGKCVGGPCRGGRLRPLHVAERDTPGGRAVFWLPEADLRPASA
Sequences:
>Translated_130_residues MTDAALEPVRVCASEELVDGGAGVRIDATHAGGDAVVFFVRYDGVAYGYLNRCAHVPMELDWNEGQFFESSGLYLMCATH GAIYAPDTGKCVGGPCRGGRLRPLHVAERDTPGGRAVFWLPEADLRPASA >Mature_129_residues TDAALEPVRVCASEELVDGGAGVRIDATHAGGDAVVFFVRYDGVAYGYLNRCAHVPMELDWNEGQFFESSGLYLMCATHG AIYAPDTGKCVGGPCRGGRLRPLHVAERDTPGGRAVFWLPEADLRPASA
Specific function: Unknown
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13872; Mature: 13741
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAALEPVRVCASEELVDGGAGVRIDATHAGGDAVVFFVRYDGVAYGYLNRCAHVPMEL CCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCEEEECHHHHHCCCEEE DWNEGQFFESSGLYLMCATHGAIYAPDTGKCVGGPCRGGRLRPLHVAERDTPGGRAVFWL ECCCCCEEECCCCEEEEECCCEEECCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEEEE PEADLRPASA CCCCCCCCCC >Mature Secondary Structure TDAALEPVRVCASEELVDGGAGVRIDATHAGGDAVVFFVRYDGVAYGYLNRCAHVPMEL CCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCEEEEEEEECCEEEECHHHHHCCCEEE DWNEGQFFESSGLYLMCATHGAIYAPDTGKCVGGPCRGGRLRPLHVAERDTPGGRAVFWL ECCCCCEEECCCCEEEEECCCEEECCCCCCEECCCCCCCCCCEEEEECCCCCCCEEEEEE PEADLRPASA CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA