Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is yjgR [H]

Identifier: 183221713

GI number: 183221713

Start: 2413530

End: 2415113

Strand: Direct

Name: yjgR [H]

Synonym: LEPBI_I2342

Alternate gene names: 183221713

Gene position: 2413530-2415113 (Clockwise)

Preceding gene: 183221711

Following gene: 183221714

Centisome position: 67.05

GC content: 45.27

Gene sequence:

>1584_bases
ATGGCCAAACAATCCGATGCATTTACAAAAAAAATCCAGGAAGGATACCCAAGTGACGGGTCCCTTTTTTTAGGATGTGG
AAAATTTGATGGGGACACTTTCCCTGAAGCCAAGGTCCAAATCCCCCTCTCCACCTTAAACCGACATGGTCTGATCGCCG
GTGCCACGGGAACAGGAAAAACCAAAACCTTACAACTCCTCACAGAATCCCTTTCCGATGCGGGTGTGCCCGTTGTCCTT
ATGGACATCAAAGGAGACCTTTCTGGTCTTGCGGCAGAAGGCGAATCCAATGAAAAAATCGAAGAACGAACCAAGATCCT
TGGTTCGGAATGGAATCCCACAACCTACCCCGTTGAATTTTTATCCATCTCCAAAGAACCAGGGGTCAAACTCCGTGCAA
CAGTTGCCGAGTTTGGTCCGATTTTACTTTCTCGGATTTTGGAACTCAATGAAACACAAGGCAGTGTGGTTTCCCTTGTC
TTTAAATACTGTGATGATTTGGGGCTTCCCATCCTTGACCTCAAGGATTTCAAAAAAGCACTCCAATACATCAATGACGA
AGGCAAAGAGGAACTAGAAAAAGAATACGGCACTGTTTCCTCTCAAAGTGTTTCGATCATCTTACGAAAGTTAATGGATC
TGGAAAGCCAAGGCGGGGAGGATTTTTTTGGTGAACCTTCGTTTGATGTGGATGACCTTATCCAAACAGAATCTAAAAAA
GGGAAAATTTCCATTGTCAGGCTCACAGACATTCAAACCAAACCACGTCTTTTTTCTACATTTATGTTGTCTCTCCTCAC
AGAGATTTATGCGAATTTTCCAGAAGAAGGTGATTTGGAGAAACCAAAACTAGTATTATTCATCGATGAAGCCCACTTGG
TCTTTGATGAAGCTTCCAGTGATTTGTTAAAACAATTGGAAACAATGGTACGCCTCATCCGTTCCAAAGGTGTGGGAATT
ATTTTTTGTACACAATCGCCAACCGATTTACCAAAGGAAATTTTAGGCCAATTGGGACTCAAAGTCCAACATGCCCTCCG
CGCCTTCACAGCAAACGACCGCAAGGCGATCAAAACCGCTTCCGAAAATTATCCAGAAACGGATTTTTATGATACCAAAG
AAGTGATCACAGAACTTGGGATTGGGGAGGCATTCATCACAGCCCTAAATACCAAAGGATCTCCCACTCCCCTCGTCCAC
ACCTTTCTCTGTCCTCCCAAGTCTCGTATGGGAACTCTCACAACAAAGGAACTCGAAGGTTTGGTTGGAAAATCGGAACT
AGTGAAAAAATACGAAACCACCCTCGATCGGGAAAGTGCTCACGAAATGCTCACTAAAAAGATGGAAACCATTGCCGACG
AGACGGAATCGGCAGAAGAGGAAACGGGATCCAAAAAACCCAAATCCAAACGTGCCAAAGAAAAAGAAGACCCCAGTTTT
GTGGAAACCCTCTCCAAAAACCCCCTCGCCAGAGAAGTAGGAAGGACCGTTGCCAAGGAAGTGACTCGGGGCCTACTCGG
GATGCTCGGTGTCACCCCCAAGCGCGGCTCAAAACGCAAAAAAACAGGGCTTTTCGGGTTCTAA

Upstream 100 bases:

>100_bases
AGGATCACTTGGAAATGCCGAGCGCATTGCCCACTCTCCGCTTAGAAAACATTGACTTAGTGGGGAATGAAAATGAACTA
GTGGAGTTTCGAGGGAACCA

Downstream 100 bases:

>100_bases
TTTCATTTTAGCACTCTTTGATTGAAAGTGCTTGACGAATCCTTCCTCCAATCATTCTATGGTACTTGAGTTTAGCACTC
TTTTTGAAATGGTGCTAAAC

Product: putative ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MAKQSDAFTKKIQEGYPSDGSLFLGCGKFDGDTFPEAKVQIPLSTLNRHGLIAGATGTGKTKTLQLLTESLSDAGVPVVL
MDIKGDLSGLAAEGESNEKIEERTKILGSEWNPTTYPVEFLSISKEPGVKLRATVAEFGPILLSRILELNETQGSVVSLV
FKYCDDLGLPILDLKDFKKALQYINDEGKEELEKEYGTVSSQSVSIILRKLMDLESQGGEDFFGEPSFDVDDLIQTESKK
GKISIVRLTDIQTKPRLFSTFMLSLLTEIYANFPEEGDLEKPKLVLFIDEAHLVFDEASSDLLKQLETMVRLIRSKGVGI
IFCTQSPTDLPKEILGQLGLKVQHALRAFTANDRKAIKTASENYPETDFYDTKEVITELGIGEAFITALNTKGSPTPLVH
TFLCPPKSRMGTLTTKELEGLVGKSELVKKYETTLDRESAHEMLTKKMETIADETESAEEETGSKKPKSKRAKEKEDPSF
VETLSKNPLAREVGRTVAKEVTRGLLGMLGVTPKRGSKRKKTGLFGF

Sequences:

>Translated_527_residues
MAKQSDAFTKKIQEGYPSDGSLFLGCGKFDGDTFPEAKVQIPLSTLNRHGLIAGATGTGKTKTLQLLTESLSDAGVPVVL
MDIKGDLSGLAAEGESNEKIEERTKILGSEWNPTTYPVEFLSISKEPGVKLRATVAEFGPILLSRILELNETQGSVVSLV
FKYCDDLGLPILDLKDFKKALQYINDEGKEELEKEYGTVSSQSVSIILRKLMDLESQGGEDFFGEPSFDVDDLIQTESKK
GKISIVRLTDIQTKPRLFSTFMLSLLTEIYANFPEEGDLEKPKLVLFIDEAHLVFDEASSDLLKQLETMVRLIRSKGVGI
IFCTQSPTDLPKEILGQLGLKVQHALRAFTANDRKAIKTASENYPETDFYDTKEVITELGIGEAFITALNTKGSPTPLVH
TFLCPPKSRMGTLTTKELEGLVGKSELVKKYETTLDRESAHEMLTKKMETIADETESAEEETGSKKPKSKRAKEKEDPSF
VETLSKNPLAREVGRTVAKEVTRGLLGMLGVTPKRGSKRKKTGLFGF
>Mature_526_residues
AKQSDAFTKKIQEGYPSDGSLFLGCGKFDGDTFPEAKVQIPLSTLNRHGLIAGATGTGKTKTLQLLTESLSDAGVPVVLM
DIKGDLSGLAAEGESNEKIEERTKILGSEWNPTTYPVEFLSISKEPGVKLRATVAEFGPILLSRILELNETQGSVVSLVF
KYCDDLGLPILDLKDFKKALQYINDEGKEELEKEYGTVSSQSVSIILRKLMDLESQGGEDFFGEPSFDVDDLIQTESKKG
KISIVRLTDIQTKPRLFSTFMLSLLTEIYANFPEEGDLEKPKLVLFIDEAHLVFDEASSDLLKQLETMVRLIRSKGVGII
FCTQSPTDLPKEILGQLGLKVQHALRAFTANDRKAIKTASENYPETDFYDTKEVITELGIGEAFITALNTKGSPTPLVHT
FLCPPKSRMGTLTTKELEGLVGKSELVKKYETTLDRESAHEMLTKKMETIADETESAEEETGSKKPKSKRAKEKEDPSFV
ETLSKNPLAREVGRTVAKEVTRGLLGMLGVTPKRGSKRKKTGLFGF

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiB [H]

Homologues:

Organism=Escherichia coli, GI1790714, Length=482, Percent_Identity=43.7759336099585, Blast_Score=377, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008571 [H]

Pfam domain/function: PF05872 DUF853 [H]

EC number: NA

Molecular weight: Translated: 58068; Mature: 57937

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQSDAFTKKIQEGYPSDGSLFLGCGKFDGDTFPEAKVQIPLSTLNRHGLIAGATGTGK
CCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHCCCCEEEECCCCCC
TKTLQLLTESLSDAGVPVVLMDIKGDLSGLAAEGESNEKIEERTKILGSEWNPTTYPVEF
HHHHHHHHHHHHCCCCCEEEEECCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCE
LSISKEPGVKLRATVAEFGPILLSRILELNETQGSVVSLVFKYCDDLGLPILDLKDFKKA
EEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
LQYINDEGKEELEKEYGTVSSQSVSIILRKLMDLESQGGEDFFGEPSFDVDDLIQTESKK
HHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCC
GKISIVRLTDIQTKPRLFSTFMLSLLTEIYANFPEEGDLEKPKLVLFIDEAHLVFDEASS
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHH
DLLKQLETMVRLIRSKGVGIIFCTQSPTDLPKEILGQLGLKVQHALRAFTANDRKAIKTA
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHCCCHHHHHHH
SENYPETDFYDTKEVITELGIGEAFITALNTKGSPTPLVHTFLCPPKSRMGTLTTKELEG
HCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHH
LVGKSELVKKYETTLDRESAHEMLTKKMETIADETESAEEETGSKKPKSKRAKEKEDPSF
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHH
VETLSKNPLAREVGRTVAKEVTRGLLGMLGVTPKRGSKRKKTGLFGF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKQSDAFTKKIQEGYPSDGSLFLGCGKFDGDTFPEAKVQIPLSTLNRHGLIAGATGTGK
CCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHCCCCEEEECCCCCC
TKTLQLLTESLSDAGVPVVLMDIKGDLSGLAAEGESNEKIEERTKILGSEWNPTTYPVEF
HHHHHHHHHHHHCCCCCEEEEECCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCE
LSISKEPGVKLRATVAEFGPILLSRILELNETQGSVVSLVFKYCDDLGLPILDLKDFKKA
EEECCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHH
LQYINDEGKEELEKEYGTVSSQSVSIILRKLMDLESQGGEDFFGEPSFDVDDLIQTESKK
HHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCC
GKISIVRLTDIQTKPRLFSTFMLSLLTEIYANFPEEGDLEKPKLVLFIDEAHLVFDEASS
CCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHH
DLLKQLETMVRLIRSKGVGIIFCTQSPTDLPKEILGQLGLKVQHALRAFTANDRKAIKTA
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHCCCHHHHHHH
SENYPETDFYDTKEVITELGIGEAFITALNTKGSPTPLVHTFLCPPKSRMGTLTTKELEG
HCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEECCCHHHCCCCHHHHHHH
LVGKSELVKKYETTLDRESAHEMLTKKMETIADETESAEEETGSKKPKSKRAKEKEDPSF
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHH
VETLSKNPLAREVGRTVAKEVTRGLLGMLGVTPKRGSKRKKTGLFGF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]