Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311545

Identifier: 18311545

GI number: 18311545

Start: 2935657

End: 2937393

Strand: Reverse

Name: 18311545

Synonym: CPE2563

Alternate gene names: NA

Gene position: 2937393-2935657 (Counterclockwise)

Preceding gene: 18311546

Following gene: 18311544

Centisome position: 96.9

GC content: 32.01

Gene sequence:

>1737_bases
GTGGAGTCAACTGAGAGAAAAAACTTCTATAATGATAAAAATTATATAAGCTTTGTTGTGGCTTATGATGGAAATATTAA
AAAAGAAATTGATGATATAAATGATGCTAGTATCTTTTTTATTGATGACAATTTTGCAATCTTATCTATAAAATTACAAA
ACTATATGGAAACTATAAGAAGTATAAAAAGTATAATTTATATAGAGTTAAATGGAATATATACCCTAGGTGAAAGTCCT
GTAGAAGATTCAAAGGCTCCAATATTTCATAGGAATCCATCTTTAAATCTTAGAGGAAGTGGAGTTGTTGTTGCCATAGT
TGATACTGGAATAGATTATTTAAATAATGAATTCATGAGAGAAGATGAAACTACTAGAATATTAAGGATTTGGGATCAAA
CAATAGATAGTGGGAAGACTCCTGATGGATTTATTAGTGGAAGCGAGTATACAGAAGAAGATATAAATAAAGCTATACAA
GCTCAAAAACAAGGGCAGAATCCATATGATATTGTTCCTTCAAAAGATGATTATGGCCATGGAACTAAGATGGCAGGGAT
AGTTGGAGCTAGAGGGATTAATAGAGAAATAGTAGGAGTAGCTCCAGATTGTGAGTTTATAATCATAAAATTACAGGAAG
CATCTAAAGAATATGTAGATTTTTATTATGCTAAAGGAGATAAGGCTAAATATAGAAATACAGATATAATAATGGCTCTT
AAATATTTATATGAATTATCATTTACCTTAAATAAACCAATGATAATATACTTACCTTTAGGAAGCAACTTAGGAGATCA
TGCAGGTGCAAGCATATTAGAACGATATGTTGATACTAAAATCTCGGGGAGAAACTCCTTATTTGTAGTTACGTCTACAG
GAAATCAAGGAAATACAGATACACATACTTCAGGGGAGATAAAGAGTAATGGTGATAGTCAGATAATAGAACTTAATTGT
GGGAAAGAGCAAAAAGGATTGGTTTTACAAATATATGCTCAAAGGCCTAGTAAAATAAAGTTAGGCATATTATCTCCTTC
TGGGGAGAGATTTGAAAATACTAATCCTAGAAAGACAAAGCATATATTAATAAATGATGCACCAATTTGGAAATTTATTT
ATGAAGGAACTACAGTACAAGTTACTTATGACTCCCCAGATGAATTTACTGGAGATGATAAGTTTGTAATAAAGATTGAG
GGAATCACAGAGGGGGTTTGGAGGTTTATATTAACTAGTAACAATATAGTTGATGGTAAATATTATGCTTGGATTCTTCA
AAGAGAATTATTAGATGAGGATACAAGATTTTTGAATCCTTCTCCTTATACAACATTAACTATACCAGGAACTGCAAAGA
CTATTATTAATACTTCATACTACAATCAAAATAATGGGGCTATAGTATCAGAATCTGGAAGAGGATATACAATGAAAGAT
TATATACAGCCTATAATAACAGCTGGGGGCATAAATGCCATAACAACTAAACCTGGTGGAGGGACTATAACCATGTCTGG
GGCAAGTGTTGCTGGGGCAATTTTAGCAGGGTGCTGTGCTTTAATAATCCAATGGGCCGTTGTAGATGGAAATGATCCTC
AAATGTATGCAACTAAATTACAAGCTTATATTATTAGAGGAGCTAGGAAAAGAGAAGGAGATACTTATCCAAATAGACAG
TGGGGATATGGAATTTTGGACATGCAAGAAATATTTAAGAGTTTAACGAATAAGTAA

Upstream 100 bases:

>100_bases
TTTTTATATTTAAATACTTTTTATGTTGGTTATCAAAAAGAAGAAATTCTGAATAAAATAGCTATAAGAAAATAAAGTAA
GTAAGAAGGAAGTGGATTTA

Downstream 100 bases:

>100_bases
ATAAGGAGTATAAGTATGGAGAATAAAGCTAAGGTTGGCATAGATTTTATAAATACAATACCCAAGCAAATACTAACTAG
CTTAATAGAACAATATTCCC

Product: Ser-type protease

Products: NA

Alternate protein names: Peptidase S8 And S; Subtilase Family Protein; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Subtilisin Like Protease; Ser-Type Protease; Germination-Specific Protease; Subtilase; Serine-Type Protease; Spore-Cortex-Lytic; Protease CspB; DNA/RNA Non-Specific Endonuclease; Subtilisin-Like Protease

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MESTERKNFYNDKNYISFVVAYDGNIKKEIDDINDASIFFIDDNFAILSIKLQNYMETIRSIKSIIYIELNGIYTLGESP
VEDSKAPIFHRNPSLNLRGSGVVVAIVDTGIDYLNNEFMREDETTRILRIWDQTIDSGKTPDGFISGSEYTEEDINKAIQ
AQKQGQNPYDIVPSKDDYGHGTKMAGIVGARGINREIVGVAPDCEFIIIKLQEASKEYVDFYYAKGDKAKYRNTDIIMAL
KYLYELSFTLNKPMIIYLPLGSNLGDHAGASILERYVDTKISGRNSLFVVTSTGNQGNTDTHTSGEIKSNGDSQIIELNC
GKEQKGLVLQIYAQRPSKIKLGILSPSGERFENTNPRKTKHILINDAPIWKFIYEGTTVQVTYDSPDEFTGDDKFVIKIE
GITEGVWRFILTSNNIVDGKYYAWILQRELLDEDTRFLNPSPYTTLTIPGTAKTIINTSYYNQNNGAIVSESGRGYTMKD
YIQPIITAGGINAITTKPGGGTITMSGASVAGAILAGCCALIIQWAVVDGNDPQMYATKLQAYIIRGARKREGDTYPNRQ
WGYGILDMQEIFKSLTNK

Sequences:

>Translated_578_residues
MESTERKNFYNDKNYISFVVAYDGNIKKEIDDINDASIFFIDDNFAILSIKLQNYMETIRSIKSIIYIELNGIYTLGESP
VEDSKAPIFHRNPSLNLRGSGVVVAIVDTGIDYLNNEFMREDETTRILRIWDQTIDSGKTPDGFISGSEYTEEDINKAIQ
AQKQGQNPYDIVPSKDDYGHGTKMAGIVGARGINREIVGVAPDCEFIIIKLQEASKEYVDFYYAKGDKAKYRNTDIIMAL
KYLYELSFTLNKPMIIYLPLGSNLGDHAGASILERYVDTKISGRNSLFVVTSTGNQGNTDTHTSGEIKSNGDSQIIELNC
GKEQKGLVLQIYAQRPSKIKLGILSPSGERFENTNPRKTKHILINDAPIWKFIYEGTTVQVTYDSPDEFTGDDKFVIKIE
GITEGVWRFILTSNNIVDGKYYAWILQRELLDEDTRFLNPSPYTTLTIPGTAKTIINTSYYNQNNGAIVSESGRGYTMKD
YIQPIITAGGINAITTKPGGGTITMSGASVAGAILAGCCALIIQWAVVDGNDPQMYATKLQAYIIRGARKREGDTYPNRQ
WGYGILDMQEIFKSLTNK
>Mature_578_residues
MESTERKNFYNDKNYISFVVAYDGNIKKEIDDINDASIFFIDDNFAILSIKLQNYMETIRSIKSIIYIELNGIYTLGESP
VEDSKAPIFHRNPSLNLRGSGVVVAIVDTGIDYLNNEFMREDETTRILRIWDQTIDSGKTPDGFISGSEYTEEDINKAIQ
AQKQGQNPYDIVPSKDDYGHGTKMAGIVGARGINREIVGVAPDCEFIIIKLQEASKEYVDFYYAKGDKAKYRNTDIIMAL
KYLYELSFTLNKPMIIYLPLGSNLGDHAGASILERYVDTKISGRNSLFVVTSTGNQGNTDTHTSGEIKSNGDSQIIELNC
GKEQKGLVLQIYAQRPSKIKLGILSPSGERFENTNPRKTKHILINDAPIWKFIYEGTTVQVTYDSPDEFTGDDKFVIKIE
GITEGVWRFILTSNNIVDGKYYAWILQRELLDEDTRFLNPSPYTTLTIPGTAKTIINTSYYNQNNGAIVSESGRGYTMKD
YIQPIITAGGINAITTKPGGGTITMSGASVAGAILAGCCALIIQWAVVDGNDPQMYATKLQAYIIRGARKREGDTYPNRQ
WGYGILDMQEIFKSLTNK

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64541; Mature: 64541

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESTERKNFYNDKNYISFVVAYDGNIKKEIDDINDASIFFIDDNFAILSIKLQNYMETIR
CCCCCCCCCCCCCCEEEEEEEECCCCHHHHCCCCCCEEEEEECCEEEEEEEHHHHHHHHH
SIKSIIYIELNGIYTLGESPVEDSKAPIFHRNPSLNLRGSGVVVAIVDTGIDYLNNEFMR
HHHEEEEEEECCEEEECCCCCCCCCCCEEECCCCCEECCCCEEEEEEECCCHHHCHHHHC
EDETTRILRIWDQTIDSGKTPDGFISGSEYTEEDINKAIQAQKQGQNPYDIVPSKDDYGH
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GTKMAGIVGARGINREIVGVAPDCEFIIIKLQEASKEYVDFYYAKGDKAKYRNTDIIMAL
CCEEEHEEECCCCCCEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHH
KYLYELSFTLNKPMIIYLPLGSNLGDHAGASILERYVDTKISGRNSLFVVTSTGNQGNTD
HHHHHHHEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCEECCCCEEEEEECCCCCCCCC
THTSGEIKSNGDSQIIELNCGKEQKGLVLQIYAQRPSKIKLGILSPSGERFENTNPRKTK
CCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEE
HILINDAPIWKFIYEGTTVQVTYDSPDEFTGDDKFVIKIEGITEGVWRFILTSNNIVDGK
EEEEECCCEEEEEECCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEECCCEECCH
YYAWILQRELLDEDTRFLNPSPYTTLTIPGTAKTIINTSYYNQNNGAIVSESGRGYTMKD
HEEEEHHHHHHCCCHHCCCCCCCEEEEECCCCEEEEEEEEEECCCCEEEECCCCCCCHHH
YIQPIITAGGINAITTKPGGGTITMSGASVAGAILAGCCALIIQWAVVDGNDPQMYATKL
HHHHHHHCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHH
QAYIIRGARKREGDTYPNRQWGYGILDMQEIFKSLTNK
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MESTERKNFYNDKNYISFVVAYDGNIKKEIDDINDASIFFIDDNFAILSIKLQNYMETIR
CCCCCCCCCCCCCCEEEEEEEECCCCHHHHCCCCCCEEEEEECCEEEEEEEHHHHHHHHH
SIKSIIYIELNGIYTLGESPVEDSKAPIFHRNPSLNLRGSGVVVAIVDTGIDYLNNEFMR
HHHEEEEEEECCEEEECCCCCCCCCCCEEECCCCCEECCCCEEEEEEECCCHHHCHHHHC
EDETTRILRIWDQTIDSGKTPDGFISGSEYTEEDINKAIQAQKQGQNPYDIVPSKDDYGH
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GTKMAGIVGARGINREIVGVAPDCEFIIIKLQEASKEYVDFYYAKGDKAKYRNTDIIMAL
CCEEEHEEECCCCCCEEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHH
KYLYELSFTLNKPMIIYLPLGSNLGDHAGASILERYVDTKISGRNSLFVVTSTGNQGNTD
HHHHHHHEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCEECCCCEEEEEECCCCCCCCC
THTSGEIKSNGDSQIIELNCGKEQKGLVLQIYAQRPSKIKLGILSPSGERFENTNPRKTK
CCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCEE
HILINDAPIWKFIYEGTTVQVTYDSPDEFTGDDKFVIKIEGITEGVWRFILTSNNIVDGK
EEEEECCCEEEEEECCEEEEEEECCCCCCCCCCEEEEEEECCCCCEEEEEEECCCEECCH
YYAWILQRELLDEDTRFLNPSPYTTLTIPGTAKTIINTSYYNQNNGAIVSESGRGYTMKD
HEEEEHHHHHHCCCHHCCCCCCCEEEEECCCCEEEEEEEEEECCCCEEEECCCCCCCHHH
YIQPIITAGGINAITTKPGGGTITMSGASVAGAILAGCCALIIQWAVVDGNDPQMYATKL
HHHHHHHCCCCEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHH
QAYIIRGARKREGDTYPNRQWGYGILDMQEIFKSLTNK
HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA