Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311117

Identifier: 18311117

GI number: 18311117

Start: 2445832

End: 2446674

Strand: Reverse

Name: 18311117

Synonym: CPE2135

Alternate gene names: NA

Gene position: 2446674-2445832 (Counterclockwise)

Preceding gene: 18311118

Following gene: 18311116

Centisome position: 80.71

GC content: 27.16

Gene sequence:

>843_bases
ATGGGTAGCTATAACAAAGAATATGAGAAGTATTATAGAAAAATAAATAAGACAAGAAAAACTTCTCCTAATCATGAGGT
GAATTTCAAAACTAAAGGTTCTTATAAGAGAAGAGAGAAAGATAGTTTGGGAAAATACGCAATTAAGGAAGTTGTTTTCT
CATCAATTTTAGGTTTTTTTATTTTTTCTAGCTTTTTTTTAATGGGACAAGTAGAAAATGAATTTTTAGTAGGATTAAGT
AGAAAATTTAAAGAGGTAATATCAACTGATGGATACTATAAAAACTTAGATTTAAATGAAAGTAAAATAGTAGCTACTAT
TAGTAGTGGAATAAAGGATGGTTTTAATTTAGAGAATTCTAATTTTAAAAAAGAACCTAAACAAGCTAGTGAAGAAAAGG
TATCTGAAAATAGTGGAGAAGTAAGTGCTTTTAATAATTTTCAGGTTATTGAGAAGGAATCTATAGATTTTTTAAAGGAA
AGTAAGGTAATTCCTTTTAATGGAGAAGTTAAAACTTTGGAAAATAATAATTTAAAGGGAAAAAATATTTATTTAAGTGG
TTCAAGGGATGAGGTGAAAAGTCTTTTAAAAGGAACCATAAGTGAAGTGAAAAATGAAAATGGAACATATACTGTGAAGA
TGAATTATTATGATGACTTAGAAGTTTTATATCACAATTTAGAAGATGTGGTAAAAAAAGAAGGGGACAGTATAGAAGAG
GGAGAGAAAATAGGTATTTCATCTGAGAATGAAAAAGTAAAAGGTGTAATAATTCAGGTATTATTTAAAAATGAGTATGT
TAATCCAGAAGAAAGCATGAGGTTTTTAGGAGATAAGCAGTGA

Upstream 100 bases:

>100_bases
TTATATCTATTATATTTCACTTTGTAATAAAAGTTCTATAAGATGCATAAAAAAAATATATATTAAGTATAATTAAAGAT
TTCTAGAAAGGAGAAGAAAA

Downstream 100 bases:

>100_bases
AAATCGACAAAAAGATAATTATACAGCTTGTTACATTTTTTATTTTAGGATTTAAATTTAACTTAGCTTTAGCTTTTTTT
TGGATTATAATACATGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MGSYNKEYEKYYRKINKTRKTSPNHEVNFKTKGSYKRREKDSLGKYAIKEVVFSSILGFFIFSSFFLMGQVENEFLVGLS
RKFKEVISTDGYYKNLDLNESKIVATISSGIKDGFNLENSNFKKEPKQASEEKVSENSGEVSAFNNFQVIEKESIDFLKE
SKVIPFNGEVKTLENNNLKGKNIYLSGSRDEVKSLLKGTISEVKNENGTYTVKMNYYDDLEVLYHNLEDVVKKEGDSIEE
GEKIGISSENEKVKGVIIQVLFKNEYVNPEESMRFLGDKQ

Sequences:

>Translated_280_residues
MGSYNKEYEKYYRKINKTRKTSPNHEVNFKTKGSYKRREKDSLGKYAIKEVVFSSILGFFIFSSFFLMGQVENEFLVGLS
RKFKEVISTDGYYKNLDLNESKIVATISSGIKDGFNLENSNFKKEPKQASEEKVSENSGEVSAFNNFQVIEKESIDFLKE
SKVIPFNGEVKTLENNNLKGKNIYLSGSRDEVKSLLKGTISEVKNENGTYTVKMNYYDDLEVLYHNLEDVVKKEGDSIEE
GEKIGISSENEKVKGVIIQVLFKNEYVNPEESMRFLGDKQ
>Mature_279_residues
GSYNKEYEKYYRKINKTRKTSPNHEVNFKTKGSYKRREKDSLGKYAIKEVVFSSILGFFIFSSFFLMGQVENEFLVGLSR
KFKEVISTDGYYKNLDLNESKIVATISSGIKDGFNLENSNFKKEPKQASEEKVSENSGEVSAFNNFQVIEKESIDFLKES
KVIPFNGEVKTLENNNLKGKNIYLSGSRDEVKSLLKGTISEVKNENGTYTVKMNYYDDLEVLYHNLEDVVKKEGDSIEEG
EKIGISSENEKVKGVIIQVLFKNEYVNPEESMRFLGDKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32119; Mature: 31987

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSYNKEYEKYYRKINKTRKTSPNHEVNFKTKGSYKRREKDSLGKYAIKEVVFSSILGFF
CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IFSSFFLMGQVENEFLVGLSRKFKEVISTDGYYKNLDLNESKIVATISSGIKDGFNLENS
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEHHHHCCCCCCCCCC
NFKKEPKQASEEKVSENSGEVSAFNNFQVIEKESIDFLKESKVIPFNGEVKTLENNNLKG
CCCCCHHHHHHHHHHCCCCCEEECCCEEEECHHHHHHHHHCCCCCCCCCEEEECCCCCCC
KNIYLSGSRDEVKSLLKGTISEVKNENGTYTVKMNYYDDLEVLYHNLEDVVKKEGDSIEE
CEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC
GEKIGISSENEKVKGVIIQVLFKNEYVNPEESMRFLGDKQ
CCCCCCCCCCCHHHHHHEEEEHHCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
GSYNKEYEKYYRKINKTRKTSPNHEVNFKTKGSYKRREKDSLGKYAIKEVVFSSILGFF
CCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IFSSFFLMGQVENEFLVGLSRKFKEVISTDGYYKNLDLNESKIVATISSGIKDGFNLENS
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEHHHHCCCCCCCCCC
NFKKEPKQASEEKVSENSGEVSAFNNFQVIEKESIDFLKESKVIPFNGEVKTLENNNLKG
CCCCCHHHHHHHHHHCCCCCEEECCCEEEECHHHHHHHHHCCCCCCCCCEEEECCCCCCC
KNIYLSGSRDEVKSLLKGTISEVKNENGTYTVKMNYYDDLEVLYHNLEDVVKKEGDSIEE
CEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC
GEKIGISSENEKVKGVIIQVLFKNEYVNPEESMRFLGDKQ
CCCCCCCCCCCHHHHHHEEEEHHCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA