| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is minE
Identifier: 18311119
GI number: 18311119
Start: 2448096
End: 2448368
Strand: Reverse
Name: minE
Synonym: CPE2137
Alternate gene names: 18311119
Gene position: 2448368-2448096 (Counterclockwise)
Preceding gene: 18311120
Following gene: 18311118
Centisome position: 80.77
GC content: 28.94
Gene sequence:
>273_bases ATGAGTTTTTTAAATGTTTTTTCTAGTAGACCTACGCCGAAACAAGTTGCTAAGGATAGATTAAAGGTTATTTTAATCCA TGATAGAGGGGAACTATCAGATGAAGTTTTAGATAAAATAAGACTTGAAATATTAGATGTACTTTCTAAATATGTAGAGA TTGAAAATGAGGATGTTGACATAACTGTTACAAAGTCAAATCCAATAGAAGGAGAGTCACCATCTTTAGTAGCAAATATA CCAATAAAAAATATAAAAGGTAAAGCTAGATAA
Upstream 100 bases:
>100_bases ATAATAGGAGAAGATGTTCCAATAATGGATTTAAACACAGAACATCAAGGAATATTTAGTTCTATATTAAAGTTGTTTAG AAGAGGGTAGGTGAGAGAAA
Downstream 100 bases:
>100_bases TTTAAAAATATAAGCTATTTCAAATTTTTTGAGATAGCTTTTTATTAGTCTTTTAAAAAGTTCAGAATTTTGTAATTGAA AATAGGTAAAAATAAAGTAT
Product: cell division topological specificity factor MinE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MSFLNVFSSRPTPKQVAKDRLKVILIHDRGELSDEVLDKIRLEILDVLSKYVEIENEDVDITVTKSNPIEGESPSLVANI PIKNIKGKAR
Sequences:
>Translated_90_residues MSFLNVFSSRPTPKQVAKDRLKVILIHDRGELSDEVLDKIRLEILDVLSKYVEIENEDVDITVTKSNPIEGESPSLVANI PIKNIKGKAR >Mature_89_residues SFLNVFSSRPTPKQVAKDRLKVILIHDRGELSDEVLDKIRLEILDVLSKYVEIENEDVDITVTKSNPIEGESPSLVANIP IKNIKGKAR
Specific function: Prevents the cell division inhibition by proteins minC and minD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the l
COG id: COG0851
COG function: function code D; Septum formation topological specificity factor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the minE family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MINE_CLOP1 (Q0TNH5)
Other databases:
- EMBL: CP000246 - RefSeq: YP_696815.1 - STRING: Q0TNH5 - GeneID: 4202825 - GenomeReviews: CP000246_GR - KEGG: cpf:CPF_2392 - TIGR: CPF_2392 - HOGENOM: HBG449956 - OMA: VEITKER - ProtClustDB: PRK13987 - BioCyc: CPER195103:CPF_2392-MONOMER - HAMAP: MF_00262 - InterPro: IPR005527 - TIGRFAMs: TIGR01215
Pfam domain/function: PF03776 MinE
EC number: NA
Molecular weight: Translated: 10128; Mature: 9997
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLNVFSSRPTPKQVAKDRLKVILIHDRGELSDEVLDKIRLEILDVLSKYVEIENEDVD CCCCCCCCCCCCHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE ITVTKSNPIEGESPSLVANIPIKNIKGKAR EEEECCCCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure SFLNVFSSRPTPKQVAKDRLKVILIHDRGELSDEVLDKIRLEILDVLSKYVEIENEDVD CCCCCCCCCCCHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEE ITVTKSNPIEGESPSLVANIPIKNIKGKAR EEEECCCCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA