Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311079

Identifier: 18311079

GI number: 18311079

Start: 2405245

End: 2406501

Strand: Reverse

Name: 18311079

Synonym: CPE2097

Alternate gene names: NA

Gene position: 2406501-2405245 (Counterclockwise)

Preceding gene: 18311080

Following gene: 18311078

Centisome position: 79.39

GC content: 26.89

Gene sequence:

>1257_bases
ATGAAAAGGGGTAAAATTTTAATTTGGGTTTTAGCTGGGGTTATTACTACAGGACTTTTAATAAGTTCCTTTATAAGTTA
TAAAAGTACTAATAAGTATGGAGGGGAGTTATATATACTATCTAATAATGCTGCTGAGGATTCTGAAAATAATAAAGTAA
AGGTTATTAAAGAGCATGATTTTAAATTAGAAGAAGGACTATATGACTATGAAAGCTTATTAGTTAGAGATGGAAAGCTT
TATTTAGAAAGCAGAAATAGGGATGGAAAGCTCTTAAAAACAGAGGAAATTATTTTTGAAGGAAATAATTCTAAGAGGGT
TGAAGTTGAAAAGTTAAAAGAAGCTCCAAATCTTAGAGATATTGAATTTATACTAGATAACTTTGAGTTTGAAGATTTAG
GAAATGGCAATTGGAAGATTTTTAGTAAAGATTATGAAAAAGAAGAGATAGTTAATATAGAGAAGTTTAATAAAAATAAT
TTTGCAGAAGAGACCTTAAAGGAATCAGAAGAATATTATGTTTTAGAAGATTATTTGATTTTTTTTATAAATAGAAGATT
TGATTGGGGAGAAGGAATTTGGGATAAAGATGGAGATTATAAAGAAATAAGATGGTATGACTTTAACAATGAACTTTGGG
ATAGTATTGAAGTACCTAAAGAAGTTTATTTAGAGAGAAGTTTAATAGGTGTAGTAGATAATAAAGTTTTTATTTCAGGA
AGTAATATGAAAGGTCAACAATTTCCAAGTAAAATATATTCTTTAGATTTAAAAGAAAAAGTTTTAAAAGATGAAGTTGA
TTTATTAGAAAAAGTGGAAGCTTACTATGATTTAGCTTTTTTAAATGATGAAAAAATTTTATTTCATTGTGGAAGTAGTG
AGGGAGGAAAAGTTAAAATGATAGATTTAAGAAATAAAGTCACCACAGAATTATATAAATCTAATCTAGACGTAGAAAGA
TTCTTTTTATCTCAGAAAGTAGCTCCATCAGGAGATAAGATTTTTTATCTTTCTCAAAATGGAGGGAACATGGAGGTTAA
GGTTTTAAAGATAGGGAATAACAAAACCATAGCTGAAGGAAAAGTTTATGATTATGAATATAATAAAGCTGCTCTTATAA
AGGAGTATGGAGAGGATTATATTGATCCAACACCACAGATTTTATGGAATAATGATGGAAAATATTTAATTATAGGAGAA
AAAGAAAAGGGAAGTATAAAAATATCAAATATAAAAGTTTTAGAATTAAGCCAGTAA

Upstream 100 bases:

>100_bases
TTGGAAATATTTTGGCAATAAGATTTAATTTTTTAGAAAAAACTCCTGTGTAAAATAAAAGCAAATAGTAATTTTATAGA
AGATTTTGAAAGGAGTATTT

Downstream 100 bases:

>100_bases
AATTTGTGAGGGGATTTTATGAAAAAAAGAAAGGTTTTAGGTGGAGTTTTATTTAGTTTAGTACTAATAACATTAATTAC
TCTAATTATGTTTTTTAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MKRGKILIWVLAGVITTGLLISSFISYKSTNKYGGELYILSNNAAEDSENNKVKVIKEHDFKLEEGLYDYESLLVRDGKL
YLESRNRDGKLLKTEEIIFEGNNSKRVEVEKLKEAPNLRDIEFILDNFEFEDLGNGNWKIFSKDYEKEEIVNIEKFNKNN
FAEETLKESEEYYVLEDYLIFFINRRFDWGEGIWDKDGDYKEIRWYDFNNELWDSIEVPKEVYLERSLIGVVDNKVFISG
SNMKGQQFPSKIYSLDLKEKVLKDEVDLLEKVEAYYDLAFLNDEKILFHCGSSEGGKVKMIDLRNKVTTELYKSNLDVER
FFLSQKVAPSGDKIFYLSQNGGNMEVKVLKIGNNKTIAEGKVYDYEYNKAALIKEYGEDYIDPTPQILWNNDGKYLIIGE
KEKGSIKISNIKVLELSQ

Sequences:

>Translated_418_residues
MKRGKILIWVLAGVITTGLLISSFISYKSTNKYGGELYILSNNAAEDSENNKVKVIKEHDFKLEEGLYDYESLLVRDGKL
YLESRNRDGKLLKTEEIIFEGNNSKRVEVEKLKEAPNLRDIEFILDNFEFEDLGNGNWKIFSKDYEKEEIVNIEKFNKNN
FAEETLKESEEYYVLEDYLIFFINRRFDWGEGIWDKDGDYKEIRWYDFNNELWDSIEVPKEVYLERSLIGVVDNKVFISG
SNMKGQQFPSKIYSLDLKEKVLKDEVDLLEKVEAYYDLAFLNDEKILFHCGSSEGGKVKMIDLRNKVTTELYKSNLDVER
FFLSQKVAPSGDKIFYLSQNGGNMEVKVLKIGNNKTIAEGKVYDYEYNKAALIKEYGEDYIDPTPQILWNNDGKYLIIGE
KEKGSIKISNIKVLELSQ
>Mature_418_residues
MKRGKILIWVLAGVITTGLLISSFISYKSTNKYGGELYILSNNAAEDSENNKVKVIKEHDFKLEEGLYDYESLLVRDGKL
YLESRNRDGKLLKTEEIIFEGNNSKRVEVEKLKEAPNLRDIEFILDNFEFEDLGNGNWKIFSKDYEKEEIVNIEKFNKNN
FAEETLKESEEYYVLEDYLIFFINRRFDWGEGIWDKDGDYKEIRWYDFNNELWDSIEVPKEVYLERSLIGVVDNKVFISG
SNMKGQQFPSKIYSLDLKEKVLKDEVDLLEKVEAYYDLAFLNDEKILFHCGSSEGGKVKMIDLRNKVTTELYKSNLDVER
FFLSQKVAPSGDKIFYLSQNGGNMEVKVLKIGNNKTIAEGKVYDYEYNKAALIKEYGEDYIDPTPQILWNNDGKYLIIGE
KEKGSIKISNIKVLELSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48693; Mature: 48693

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRGKILIWVLAGVITTGLLISSFISYKSTNKYGGELYILSNNAAEDSENNKVKVIKEHD
CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECC
FKLEEGLYDYESLLVRDGKLYLESRNRDGKLLKTEEIIFEGNNSKRVEVEKLKEAPNLRD
CCHHCCCHHHHHHEEECCEEEEEECCCCCCEEEEEEEEEECCCCCEEEHHHHHCCCCCCE
IEFILDNFEFEDLGNGNWKIFSKDYEKEEIVNIEKFNKNNFAEETLKESEEYYVLEDYLI
EHHHCCCCCEEECCCCCEEEEECCCCHHHEEEHHHCCCCCCHHHHHHCCCCEEEEEEEEE
FFINRRFDWGEGIWDKDGDYKEIRWYDFNNELWDSIEVPKEVYLERSLIGVVDNKVFISG
EEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHCCCHHHHHHHHHEEEECCEEEEEC
SNMKGQQFPSKIYSLDLKEKVLKDEVDLLEKVEAYYDLAFLNDEKILFHCGSSEGGKVKM
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCCCCEEEE
IDLRNKVTTELYKSNLDVERFFLSQKVAPSGDKIFYLSQNGGNMEVKVLKIGNNKTIAEG
EECCCHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEECCCCEEECC
KVYDYEYNKAALIKEYGEDYIDPTPQILWNNDGKYLIIGEKEKGSIKISNIKVLELSQ
EEEEEECCCHHHHHHHCHHHCCCCCCEEECCCCCEEEEECCCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MKRGKILIWVLAGVITTGLLISSFISYKSTNKYGGELYILSNNAAEDSENNKVKVIKEHD
CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECC
FKLEEGLYDYESLLVRDGKLYLESRNRDGKLLKTEEIIFEGNNSKRVEVEKLKEAPNLRD
CCHHCCCHHHHHHEEECCEEEEEECCCCCCEEEEEEEEEECCCCCEEEHHHHHCCCCCCE
IEFILDNFEFEDLGNGNWKIFSKDYEKEEIVNIEKFNKNNFAEETLKESEEYYVLEDYLI
EHHHCCCCCEEECCCCCEEEEECCCCHHHEEEHHHCCCCCCHHHHHHCCCCEEEEEEEEE
FFINRRFDWGEGIWDKDGDYKEIRWYDFNNELWDSIEVPKEVYLERSLIGVVDNKVFISG
EEEECCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHCCCHHHHHHHHHEEEECCEEEEEC
SNMKGQQFPSKIYSLDLKEKVLKDEVDLLEKVEAYYDLAFLNDEKILFHCGSSEGGKVKM
CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCCCCEEEE
IDLRNKVTTELYKSNLDVERFFLSQKVAPSGDKIFYLSQNGGNMEVKVLKIGNNKTIAEG
EECCCHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEECCCCEEECC
KVYDYEYNKAALIKEYGEDYIDPTPQILWNNDGKYLIIGEKEKGSIKISNIKVLELSQ
EEEEEECCCHHHHHHHCHHHCCCCCCEEECCCCCEEEEECCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA