Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311078

Identifier: 18311078

GI number: 18311078

Start: 2404405

End: 2405226

Strand: Reverse

Name: 18311078

Synonym: CPE2096

Alternate gene names: NA

Gene position: 2405226-2404405 (Counterclockwise)

Preceding gene: 18311079

Following gene: 18311077

Centisome position: 79.34

GC content: 24.45

Gene sequence:

>822_bases
ATGAAAAAAAGAAAGGTTTTAGGTGGAGTTTTATTTAGTTTAGTACTAATAACATTAATTACTCTAATTATGTTTTTTAG
AGAAAATACTATTAGTAAATTTGTAAATTCTGAAACCATAAAAGAATTTACTAGTGAATCTAAGATTAAAAATAAATTGA
ATTTTAAAGCAGAAGATGAGGAATATTTTCCTTGTGAATTAGTTATTAATGATGAAAAATTATACCTACAAAAAAGAAAT
GATGATGATAAAGTTGTGGATAAGTATGAAATAGTATTTGAAAAGGATGAAGTTAAAAAAATAAAGTGTAATAATTTAAA
AGATGAAAGTATAAGAGATGAAAGTACAAAAGAGGATATAGATGAAAGGGAATATGTTAATGGCTATAAATATGAGGATT
TAGGAAATGGAAAAGGGCAGTTTTTTGATTTAGCATATAATAAAGAGTTTAAAGTTGATTTAGACAAATTTAATAAGGAT
GATATGGCTAAAAAAACTTATGGAGAATATAGTTATAGCAAGATAGTTAAAGATAAAATTTTCTTTTTTATTAGGAGAGA
TCCAGGAAAAATAAAGTGGTTTTCAGAGGAGCATAGTAGATATAAGGAACTAAGATGGTATGATTTTAATGAAGAAATTT
GGGAGAGTGTGAATCTTTCAAAAAATCAACATGTTCAAAGTATTATAGGAATTGTAGATAATAAGATTTATTTAACTGGA
ACTGAAGAGTGGGGCAGTCAGTATCCAAGTAAAATCTATAGTGTAGATTTAAAGAAAAAGAAAGTAAAAGAAGAAATAAA
ATTAAAAGATTTATGTATATAA

Upstream 100 bases:

>100_bases
TGGAAAATATTTAATTATAGGAGAAAAAGAAAAGGGAAGTATAAAAATATCAAATATAAAAGTTTTAGAATTAAGCCAGT
AAAATTTGTGAGGGGATTTT

Downstream 100 bases:

>100_bases
ATTAATAAAAAGGACAATATAATAATGTAACGTGGAGGAGATAACTTAAAGATTTCTACCGAAAGTTACATTTAAAAAAT
TTTAGTGTATGGCAAGGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKKRKVLGGVLFSLVLITLITLIMFFRENTISKFVNSETIKEFTSESKIKNKLNFKAEDEEYFPCELVINDEKLYLQKRN
DDDKVVDKYEIVFEKDEVKKIKCNNLKDESIRDESTKEDIDEREYVNGYKYEDLGNGKGQFFDLAYNKEFKVDLDKFNKD
DMAKKTYGEYSYSKIVKDKIFFFIRRDPGKIKWFSEEHSRYKELRWYDFNEEIWESVNLSKNQHVQSIIGIVDNKIYLTG
TEEWGSQYPSKIYSVDLKKKKVKEEIKLKDLCI

Sequences:

>Translated_273_residues
MKKRKVLGGVLFSLVLITLITLIMFFRENTISKFVNSETIKEFTSESKIKNKLNFKAEDEEYFPCELVINDEKLYLQKRN
DDDKVVDKYEIVFEKDEVKKIKCNNLKDESIRDESTKEDIDEREYVNGYKYEDLGNGKGQFFDLAYNKEFKVDLDKFNKD
DMAKKTYGEYSYSKIVKDKIFFFIRRDPGKIKWFSEEHSRYKELRWYDFNEEIWESVNLSKNQHVQSIIGIVDNKIYLTG
TEEWGSQYPSKIYSVDLKKKKVKEEIKLKDLCI
>Mature_273_residues
MKKRKVLGGVLFSLVLITLITLIMFFRENTISKFVNSETIKEFTSESKIKNKLNFKAEDEEYFPCELVINDEKLYLQKRN
DDDKVVDKYEIVFEKDEVKKIKCNNLKDESIRDESTKEDIDEREYVNGYKYEDLGNGKGQFFDLAYNKEFKVDLDKFNKD
DMAKKTYGEYSYSKIVKDKIFFFIRRDPGKIKWFSEEHSRYKELRWYDFNEEIWESVNLSKNQHVQSIIGIVDNKIYLTG
TEEWGSQYPSKIYSVDLKKKKVKEEIKLKDLCI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32668; Mature: 32668

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRKVLGGVLFSLVLITLITLIMFFRENTISKFVNSETIKEFTSESKIKNKLNFKAEDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCC
EYFPCELVINDEKLYLQKRNDDDKVVDKYEIVFEKDEVKKIKCNNLKDESIRDESTKEDI
CCCCEEEEECCCEEEEEECCCCHHHHHHHHEEEECCCCCEEECCCCCCCCCCCCCCHHHC
DEREYVNGYKYEDLGNGKGQFFDLAYNKEFKVDLDKFNKDDMAKKTYGEYSYSKIVKDKI
HHHHHHCCCCCCCCCCCCCCEEEEEECCEEEEEHHHCCCCHHHHHHHCCHHHHHHHHHHE
FFFIRRDPGKIKWFSEEHSRYKELRWYDFNEEIWESVNLSKNQHVQSIIGIVDNKIYLTG
EEEEECCCCCEEEECHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCEEEEEE
TEEWGSQYPSKIYSVDLKKKKVKEEIKLKDLCI
CHHHHHHCCHHHEEECHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKRKVLGGVLFSLVLITLITLIMFFRENTISKFVNSETIKEFTSESKIKNKLNFKAEDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCC
EYFPCELVINDEKLYLQKRNDDDKVVDKYEIVFEKDEVKKIKCNNLKDESIRDESTKEDI
CCCCEEEEECCCEEEEEECCCCHHHHHHHHEEEECCCCCEEECCCCCCCCCCCCCCHHHC
DEREYVNGYKYEDLGNGKGQFFDLAYNKEFKVDLDKFNKDDMAKKTYGEYSYSKIVKDKI
HHHHHHCCCCCCCCCCCCCCEEEEEECCEEEEEHHHCCCCHHHHHHHCCHHHHHHHHHHE
FFFIRRDPGKIKWFSEEHSRYKELRWYDFNEEIWESVNLSKNQHVQSIIGIVDNKIYLTG
EEEEECCCCCEEEECHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCEEEEEE
TEEWGSQYPSKIYSVDLKKKKVKEEIKLKDLCI
CHHHHHHCCHHHEEECHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA