Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is yxeH [H]

Identifier: 18310294

GI number: 18310294

Start: 1552125

End: 1552958

Strand: Reverse

Name: yxeH [H]

Synonym: CPE1312

Alternate gene names: 18310294

Gene position: 1552958-1552125 (Counterclockwise)

Preceding gene: 18310295

Following gene: 18310293

Centisome position: 51.23

GC content: 27.34

Gene sequence:

>834_bases
ATGAAGTATAAAATGATATGTATAGATATGGATGGTACATTATTAAATTCAAAGAAAGTTGTAAGTGAAGAAAATAGAAT
TGCATTAAAAAAAGCTTATGAAAAAGGAGTACACATAATAATATGCACAGGAAGAAATCCTAAAAATGCAATATATTTTT
CAGAATTTTTAGGAGTAAACTGTGCTGTAATAGCTAATAATGGAGCTTGGGTAATTGATGAAGATAAGGAAGTTATAATA
TCAAAGGATGTTTTAGATGAAAATCAATGTATGGATATTATGAGCATATGTAAAGAGTATAAAGGGGTTCCTAGTTTTCA
TTCAAGGGATAGTGTGTATTGGCCATCAAGATTTAGAAAATATTTATATGATATTATTTTGAATAAAAAAATACCTGAAA
AATATAGAGTTAAGAATATTTATGTGAAAGAAAAGGAAGAGTGGAGAGAAGTCTTTAAAAGCAACAACATAGGTAAGTGT
ATAATAATAGAATTAAATACTAAAAAGCTAAAGAAAATAAGAGAAAATTTAATTAAAAAAGGTAATTATGAAATTACTCA
ATCAGGAAGATATGCCTTAGAAGTAAATAATAAAGGGGTATCAAAGGGAAGGGCTGTAAAGGCTTTAGCAGAGGAATATA
AGATAAAAAGAGAAGAGATTATATGTATAGGTGATAATGAAAATGACTTATCTATGATCACTTATGCAGGCTTAGGTGTT
GCTATGGGAAATGCCATAGATTCTTTAAAGGAAAAAGCAGATTATATAACTGAAAGTAATGATAAAAATGGGGTGGCAAA
GGTAATATATGAATTTGTATTAAAGAATGATTAA

Upstream 100 bases:

>100_bases
AATTTATTTTAAAACTTAAGCCATAAAAATAAATTTAATATGCTAAAAGGGGGAGAGGTTAATAAATTAACTCTCTCCTT
TTATTTTGGGAGGAGAATTT

Downstream 100 bases:

>100_bases
CTTGCATTTTATTTCATTAGATAATATCATATACTTGTGACTTAACTTAAAAATTTATAATTTTTTACATTTATTTGGAG
GGACAAAGGTGAATCTTAAT

Product: HAD hydrolase, IIB family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKYKMICIDMDGTLLNSKKVVSEENRIALKKAYEKGVHIIICTGRNPKNAIYFSEFLGVNCAVIANNGAWVIDEDKEVII
SKDVLDENQCMDIMSICKEYKGVPSFHSRDSVYWPSRFRKYLYDIILNKKIPEKYRVKNIYVKEKEEWREVFKSNNIGKC
IIIELNTKKLKKIRENLIKKGNYEITQSGRYALEVNNKGVSKGRAVKALAEEYKIKREEIICIGDNENDLSMITYAGLGV
AMGNAIDSLKEKADYITESNDKNGVAKVIYEFVLKND

Sequences:

>Translated_277_residues
MKYKMICIDMDGTLLNSKKVVSEENRIALKKAYEKGVHIIICTGRNPKNAIYFSEFLGVNCAVIANNGAWVIDEDKEVII
SKDVLDENQCMDIMSICKEYKGVPSFHSRDSVYWPSRFRKYLYDIILNKKIPEKYRVKNIYVKEKEEWREVFKSNNIGKC
IIIELNTKKLKKIRENLIKKGNYEITQSGRYALEVNNKGVSKGRAVKALAEEYKIKREEIICIGDNENDLSMITYAGLGV
AMGNAIDSLKEKADYITESNDKNGVAKVIYEFVLKND
>Mature_277_residues
MKYKMICIDMDGTLLNSKKVVSEENRIALKKAYEKGVHIIICTGRNPKNAIYFSEFLGVNCAVIANNGAWVIDEDKEVII
SKDVLDENQCMDIMSICKEYKGVPSFHSRDSVYWPSRFRKYLYDIILNKKIPEKYRVKNIYVKEKEEWREVFKSNNIGKC
IIIELNTKKLKKIRENLIKKGNYEITQSGRYALEVNNKGVSKGRAVKALAEEYKIKREEIICIGDNENDLSMITYAGLGV
AMGNAIDSLKEKADYITESNDKNGVAKVIYEFVLKND

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=287, Percent_Identity=33.1010452961672, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1786982, Length=274, Percent_Identity=24.4525547445255, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI87081790, Length=278, Percent_Identity=24.8201438848921, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI48994981, Length=252, Percent_Identity=24.6031746031746, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150
- InterPro:   IPR006380 [H]

Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]

EC number: NA

Molecular weight: Translated: 31812; Mature: 31812

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKMICIDMDGTLLNSKKVVSEENRIALKKAYEKGVHIIICTGRNPKNAIYFSEFLGVN
CCEEEEEEECCCCEECCCHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEEEHHHCCE
CAVIANNGAWVIDEDKEVIISKDVLDENQCMDIMSICKEYKGVPSFHSRDSVYWPSRFRK
EEEEECCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHH
YLYDIILNKKIPEKYRVKNIYVKEKEEWREVFKSNNIGKCIIIELNTKKLKKIRENLIKK
HHHHHHHCCCCCHHHCEEEEEEECHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHC
GNYEITQSGRYALEVNNKGVSKGRAVKALAEEYKIKREEIICIGDNENDLSMITYAGLGV
CCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECHHH
AMGNAIDSLKEKADYITESNDKNGVAKVIYEFVLKND
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKYKMICIDMDGTLLNSKKVVSEENRIALKKAYEKGVHIIICTGRNPKNAIYFSEFLGVN
CCEEEEEEECCCCEECCCHHHCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEEEHHHCCE
CAVIANNGAWVIDEDKEVIISKDVLDENQCMDIMSICKEYKGVPSFHSRDSVYWPSRFRK
EEEEECCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHH
YLYDIILNKKIPEKYRVKNIYVKEKEEWREVFKSNNIGKCIIIELNTKKLKKIRENLIKK
HHHHHHHCCCCCHHHCEEEEEEECHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHC
GNYEITQSGRYALEVNNKGVSKGRAVKALAEEYKIKREEIICIGDNENDLSMITYAGLGV
CCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECHHH
AMGNAIDSLKEKADYITESNDKNGVAKVIYEFVLKND
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]