Click here to switch to the map view.

The map label for this gene is yoaR [H]

Identifier: 18310295

GI number: 18310295

Start: 1553118

End: 1554680

Strand: Reverse

Name: yoaR [H]

Synonym: CPE1313

Alternate gene names: 18310295

Gene position: 1554680-1553118 (Counterclockwise)

Preceding gene: 18310296

Following gene: 18310294

Centisome position: 51.29

GC content: 31.67

Gene sequence:

>1563_bases
GTGAAAGAAGAAAAGAAAAAATCAAGCGCAAGCTTAGTTAAGAGCAAAAAGAAAATAATAATATCAATAGTTATTATATT
AGCAATTATAATAGGTTCTATTGTTGCATATATATTAAGCATTCAGAAAAAAGTTGAACAGTGGAATGATAAGATATATC
CTAATGTATATGTTGAAAATGTAAATTTATCAGGAATGACAAAGGAAAAAGCCATTGAGGTTTTAGAGAAGGATGTAAAA
GAACCAGTAGAAAATAAAACTATAAAGGTTCAGGCGGCAGATAAAAGTATTGAAATAAAATATTCTGATTTATCACCAGA
ATATAATATAGATGAAACTGTTAATGAAGCTATGAATTATGGAAAAGATTTAAATCTTTTTGAAAAAAATAATCTTTTAA
ATGGAAAAGATAAAAAGGAATTAAATTTAGATTTTAAATATGATGAATCTAAGTTAACAGATTATGAGAAAAAACTTACT
GAAATGGTAAATCAAAATGCTAAAAATGCTACTATAAGTATAAATGGCAGTAATATAAGTGTAATAGAAGGCGAAGATGG
AAGAGCCATAGAAGAAGATAAAATGGTTTCTTTAGTAAAAGAAGCTATAAATGCAAATCCAGAGGATAATTCAGTTGTGG
AAGTGCCAGTAGAGGTTACAAAGCCAAAAATAACTAAGGAAATGCTTTCAAAAATAGACGGCGTTATAGGAAGTTTTACA
ACAAGTTATACAAGCTCAGATGCTAATAGAAGTGCTAATGTTGAAATTGCAGCTAAAACGGTTAATGGAACTATTTTAAT
GCCAGGAGATACATTTAGTTATAATAATACTTTAGGGGAAAGAACCACAGCTAAGGGATATAGAGATGGAGCGGCTTACG
TAGGAAACAAAGTAGTAATGGTTACTGGTGGAGGAATCTGTCAAGTTTCTACAACATTATACAGAGCTGTTTTAAGAGCT
GGAATAATGCCAACAGAGAGACATAATCATAGTATGACAACTACTTATTCAGGCCCAAGTGAAGATGCTACAGTTTCATG
GGGATCTTTAGACTATCAATTTAAAAACCCTTATGATTTCCCAATATATATACAAGGATATACAAGTAATAAACATGTAA
CATTTAATATATATGGAAATGTACAAGGTATGGATGGAAAAACTTATGAATTACAAACTGTAGTAAATGAAACTCTAAAA
CCATCAGTTAAAACAGTTGATGATCCTAATTTGCCAGAGGGACAAAAAGTTGTTGAGCAAAGACCAGTTACAGGATATAA
GTCATCAGGATATTTAGTAACTTATCAAAATGGAAAAGAAATAGATAAGAAATTAATAGGACATGATGTATATAAACAAA
AAGATGAAATTATAAAGGTTGGAACAAAAAAAGCTGAGCAACCAAAGCAAGAAGCACCAAAACAAGAACAGCCAGCTACT
GCAAAGCCAGAGGAGCCAAAACAAGAGGTAGCTCAGCCAGCAACATCACAACCTGCTACCAATCAAGCACCTGATGCAAC
ACCTCAAACACCTAATGCAGGGCAAACACCACCAGCTCAGTAA

Upstream 100 bases:

>100_bases
TAAAAATTTTGTTATAATAAGAAATGTTATTATATTGTAATAATTTTTAGTAATATTTAGATTATAGTTTTTTTAGAAGG
TTTTAGAGAGGAGTGTAATT

Downstream 100 bases:

>100_bases
AATGCAGGAATAAATTAAAAGATAAAATAAATAATTTTTAGTTTTTAAAGTGAATTAAAAATTTATTTTAAAACTTAAGC
CATAAAAATAAATTTAATAT

Product: vanW-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 520; Mature: 520

Protein sequence:

>520_residues
MKEEKKKSSASLVKSKKKIIISIVIILAIIIGSIVAYILSIQKKVEQWNDKIYPNVYVENVNLSGMTKEKAIEVLEKDVK
EPVENKTIKVQAADKSIEIKYSDLSPEYNIDETVNEAMNYGKDLNLFEKNNLLNGKDKKELNLDFKYDESKLTDYEKKLT
EMVNQNAKNATISINGSNISVIEGEDGRAIEEDKMVSLVKEAINANPEDNSVVEVPVEVTKPKITKEMLSKIDGVIGSFT
TSYTSSDANRSANVEIAAKTVNGTILMPGDTFSYNNTLGERTTAKGYRDGAAYVGNKVVMVTGGGICQVSTTLYRAVLRA
GIMPTERHNHSMTTTYSGPSEDATVSWGSLDYQFKNPYDFPIYIQGYTSNKHVTFNIYGNVQGMDGKTYELQTVVNETLK
PSVKTVDDPNLPEGQKVVEQRPVTGYKSSGYLVTYQNGKEIDKKLIGHDVYKQKDEIIKVGTKKAEQPKQEAPKQEQPAT
AKPEEPKQEVAQPATSQPATNQAPDATPQTPNAGQTPPAQ

Sequences:

>Translated_520_residues
MKEEKKKSSASLVKSKKKIIISIVIILAIIIGSIVAYILSIQKKVEQWNDKIYPNVYVENVNLSGMTKEKAIEVLEKDVK
EPVENKTIKVQAADKSIEIKYSDLSPEYNIDETVNEAMNYGKDLNLFEKNNLLNGKDKKELNLDFKYDESKLTDYEKKLT
EMVNQNAKNATISINGSNISVIEGEDGRAIEEDKMVSLVKEAINANPEDNSVVEVPVEVTKPKITKEMLSKIDGVIGSFT
TSYTSSDANRSANVEIAAKTVNGTILMPGDTFSYNNTLGERTTAKGYRDGAAYVGNKVVMVTGGGICQVSTTLYRAVLRA
GIMPTERHNHSMTTTYSGPSEDATVSWGSLDYQFKNPYDFPIYIQGYTSNKHVTFNIYGNVQGMDGKTYELQTVVNETLK
PSVKTVDDPNLPEGQKVVEQRPVTGYKSSGYLVTYQNGKEIDKKLIGHDVYKQKDEIIKVGTKKAEQPKQEAPKQEQPAT
AKPEEPKQEVAQPATSQPATNQAPDATPQTPNAGQTPPAQ
>Mature_520_residues
MKEEKKKSSASLVKSKKKIIISIVIILAIIIGSIVAYILSIQKKVEQWNDKIYPNVYVENVNLSGMTKEKAIEVLEKDVK
EPVENKTIKVQAADKSIEIKYSDLSPEYNIDETVNEAMNYGKDLNLFEKNNLLNGKDKKELNLDFKYDESKLTDYEKKLT
EMVNQNAKNATISINGSNISVIEGEDGRAIEEDKMVSLVKEAINANPEDNSVVEVPVEVTKPKITKEMLSKIDGVIGSFT
TSYTSSDANRSANVEIAAKTVNGTILMPGDTFSYNNTLGERTTAKGYRDGAAYVGNKVVMVTGGGICQVSTTLYRAVLRA
GIMPTERHNHSMTTTYSGPSEDATVSWGSLDYQFKNPYDFPIYIQGYTSNKHVTFNIYGNVQGMDGKTYELQTVVNETLK
PSVKTVDDPNLPEGQKVVEQRPVTGYKSSGYLVTYQNGKEIDKKLIGHDVYKQKDEIIKVGTKKAEQPKQEAPKQEQPAT
AKPEEPKQEVAQPATSQPATNQAPDATPQTPNAGQTPPAQ

Specific function: Unknown

COG id: COG2720

COG function: function code V; Uncharacterized vancomycin resistance protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022029
- InterPro:   IPR007391 [H]

Pfam domain/function: PF12229 PG_binding_4; PF04294 VanW [H]

EC number: NA

Molecular weight: Translated: 57433; Mature: 57433

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEEKKKSSASLVKSKKKIIISIVIILAIIIGSIVAYILSIQKKVEQWNDKIYPNVYVEN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
VNLSGMTKEKAIEVLEKDVKEPVENKTIKVQAADKSIEIKYSDLSPEYNIDETVNEAMNY
CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHC
GKDLNLFEKNNLLNGKDKKELNLDFKYDESKLTDYEKKLTEMVNQNAKNATISINGSNIS
CCCCCEEECCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEE
VIEGEDGRAIEEDKMVSLVKEAINANPEDNSVVEVPVEVTKPKITKEMLSKIDGVIGSFT
EEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHCCCCCHHHHHHHHHHHHHHHHHH
TSYTSSDANRSANVEIAAKTVNGTILMPGDTFSYNNTLGERTTAKGYRDGAAYVGNKVVM
CCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEE
VTGGGICQVSTTLYRAVLRAGIMPTERHNHSMTTTYSGPSEDATVSWGSLDYQFKNPYDF
EECCCEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEECCEEEEECCCCCC
PIYIQGYTSNKHVTFNIYGNVQGMDGKTYELQTVVNETLKPSVKTVDDPNLPEGQKVVEQ
EEEEEEECCCCEEEEEEEEEEECCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
RPVTGYKSSGYLVTYQNGKEIDKKLIGHDVYKQKDEIIKVGTKKAEQPKQEAPKQEQPAT
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHCCCCCCCCC
AKPEEPKQEVAQPATSQPATNQAPDATPQTPNAGQTPPAQ
CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKEEKKKSSASLVKSKKKIIISIVIILAIIIGSIVAYILSIQKKVEQWNDKIYPNVYVEN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
VNLSGMTKEKAIEVLEKDVKEPVENKTIKVQAADKSIEIKYSDLSPEYNIDETVNEAMNY
CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHC
GKDLNLFEKNNLLNGKDKKELNLDFKYDESKLTDYEKKLTEMVNQNAKNATISINGSNIS
CCCCCEEECCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEE
VIEGEDGRAIEEDKMVSLVKEAINANPEDNSVVEVPVEVTKPKITKEMLSKIDGVIGSFT
EEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEHCCCCCHHHHHHHHHHHHHHHHHH
TSYTSSDANRSANVEIAAKTVNGTILMPGDTFSYNNTLGERTTAKGYRDGAAYVGNKVVM
CCCCCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEE
VTGGGICQVSTTLYRAVLRAGIMPTERHNHSMTTTYSGPSEDATVSWGSLDYQFKNPYDF
EECCCEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCEEEECCEEEEECCCCCC
PIYIQGYTSNKHVTFNIYGNVQGMDGKTYELQTVVNETLKPSVKTVDDPNLPEGQKVVEQ
EEEEEEECCCCEEEEEEEEEEECCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
RPVTGYKSSGYLVTYQNGKEIDKKLIGHDVYKQKDEIIKVGTKKAEQPKQEAPKQEQPAT
CCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHCCCCCCCCC
AKPEEPKQEVAQPATSQPATNQAPDATPQTPNAGQTPPAQ
CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]