Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is gntP [C]

Identifier: 18309842

GI number: 18309842

Start: 1053981

End: 1055240

Strand: Direct

Name: gntP [C]

Synonym: CPE0860

Alternate gene names: 18309842

Gene position: 1053981-1055240 (Clockwise)

Preceding gene: 18309841

Following gene: 18309843

Centisome position: 34.77

GC content: 36.9

Gene sequence:

>1260_bases
GTGAATGTAACAGTTACAGCTTTAGGTGCAGTAATTGCATTAGTTATTGCAATCACTCTTATCATAAAAAAGGTTCATCC
AGCATACGGACTTATATTAGGAGCTTTAATAGGTGGACTTGTTGGTGGAGCAGGACTAACAGGGACAGTTAATTTAATGA
TGGATGGAGCCAAAAATATGATGCCTGCTATCCTTAGAATACTTACAGCAGGGGTACTAGCTGGGGTTTTAATTGAATCC
GGAGCGGCAGCCAAGATTGCAGAGACAATAGTTGAGAAGATTGGAGAATCAAGAGCTCTTATAGCCTTAGCAATAGCTAC
TATGGTTTTAACAATGGTTGGAGTTTTTGTAGACGTTTCAGTAATAACAGTATCTCCAATAGCTTTAGCAATAGCTCACA
AATCAGGTTTAAGTAAACCAGCTATATTATTAGCCATGGTTGGTGGAGGTAAGGCAGGAAATATAATGTCTCCAAACCCA
AATACCATTGCGGCAGCAGATAATTTAGGAGTTTCATTAACTAATGTTATGATAGCAGGTATAGTACCAGCTATATTTGG
AGTTATAATTACATGTATATTAGCAAGTAGAATAAAACAAAAAGGTTCTTTAGTAGAATCTGATGAACATATGAAAGAGT
TAACAGATATGCCTGGATTTTTACCAGCAATGGTTGGACCATTAGTAGCAATAATCTTATTAATGTTAAGACCAATAGCA
GGCATTGCTATAGATCCATTAATAGCTTTACCGGTAGGTGGTATATGCGGAATACTAGCTATGGGAAAAATTAAGCATAT
TAACAAATATGCAACATATGGACTAGCTAAGATGAGTGGAGTAGCTATACTTTTAATAGGTACAGGTACTTTAGCGGGAA
TAATTGCTAACTCAGGATTAAAGGATGTTATTATAAGTGGAATAAACGCTTTAGGATTGCCAAGCTTTATGTTAGCACCG
GTTTCAGGAATACTTATGTCAGCGGCAACTGCCTCTACTACTTCAGGAACAGCGGTGGCTACATCAGTATTTGGACCAAC
AATTGTTCAATTAGGAGTGGCACCACTTGCTACAGCAGCTATGATACATGCTGGGGCTACAGTTTTAGATCACTTACCTC
ATGGAAGCTTCTTCCACGCTACTGGTGGAAGTGTTTCAATGGACATGAAGGAAAGACTTAAACTTATACCATATGAATCT
TTAGTTGGATTAACAATGACAATTGTATCAACTATAATATTTGGAATAATATTAAAATAG

Upstream 100 bases:

>100_bases
TAGTGATATTAAATAATGATTTTGAATATGAAAACTTATACAATGAAAATCGTCAATATAAATAAGAATAAATGAGTTTA
ATAAGAAGGAGGAATTTATT

Downstream 100 bases:

>100_bases
TTATTTAATAAATAAAGAAAAGTGTTAACTATATGATTATTATCGCTAAGGTATAAATATTTTGTTACTTTATAATAAAG
AAAATTTTTAATAAGGTTTA

Product: gluconate permease

Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MNVTVTALGAVIALVIAITLIIKKVHPAYGLILGALIGGLVGGAGLTGTVNLMMDGAKNMMPAILRILTAGVLAGVLIES
GAAAKIAETIVEKIGESRALIALAIATMVLTMVGVFVDVSVITVSPIALAIAHKSGLSKPAILLAMVGGGKAGNIMSPNP
NTIAAADNLGVSLTNVMIAGIVPAIFGVIITCILASRIKQKGSLVESDEHMKELTDMPGFLPAMVGPLVAIILLMLRPIA
GIAIDPLIALPVGGICGILAMGKIKHINKYATYGLAKMSGVAILLIGTGTLAGIIANSGLKDVIISGINALGLPSFMLAP
VSGILMSAATASTTSGTAVATSVFGPTIVQLGVAPLATAAMIHAGATVLDHLPHGSFFHATGGSVSMDMKERLKLIPYES
LVGLTMTIVSTIIFGIILK

Sequences:

>Translated_419_residues
MNVTVTALGAVIALVIAITLIIKKVHPAYGLILGALIGGLVGGAGLTGTVNLMMDGAKNMMPAILRILTAGVLAGVLIES
GAAAKIAETIVEKIGESRALIALAIATMVLTMVGVFVDVSVITVSPIALAIAHKSGLSKPAILLAMVGGGKAGNIMSPNP
NTIAAADNLGVSLTNVMIAGIVPAIFGVIITCILASRIKQKGSLVESDEHMKELTDMPGFLPAMVGPLVAIILLMLRPIA
GIAIDPLIALPVGGICGILAMGKIKHINKYATYGLAKMSGVAILLIGTGTLAGIIANSGLKDVIISGINALGLPSFMLAP
VSGILMSAATASTTSGTAVATSVFGPTIVQLGVAPLATAAMIHAGATVLDHLPHGSFFHATGGSVSMDMKERLKLIPYES
LVGLTMTIVSTIIFGIILK
>Mature_419_residues
MNVTVTALGAVIALVIAITLIIKKVHPAYGLILGALIGGLVGGAGLTGTVNLMMDGAKNMMPAILRILTAGVLAGVLIES
GAAAKIAETIVEKIGESRALIALAIATMVLTMVGVFVDVSVITVSPIALAIAHKSGLSKPAILLAMVGGGKAGNIMSPNP
NTIAAADNLGVSLTNVMIAGIVPAIFGVIITCILASRIKQKGSLVESDEHMKELTDMPGFLPAMVGPLVAIILLMLRPIA
GIAIDPLIALPVGGICGILAMGKIKHINKYATYGLAKMSGVAILLIGTGTLAGIIANSGLKDVIISGINALGLPSFMLAP
VSGILMSAATASTTSGTAVATSVFGPTIVQLGVAPLATAAMIHAGATVLDHLPHGSFFHATGGSVSMDMKERLKLIPYES
LVGLTMTIVSTIIFGIILK

Specific function: High-Affinity Gluconate Transporter With Fairly Broad Specificity, Including Low Affinity For Glucuronate, Several Disaccharides, And Some Hexoses, But Not Glucose. [C]

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 42244; Mature: 42244

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTVTALGAVIALVIAITLIIKKVHPAYGLILGALIGGLVGGAGLTGTVNLMMDGAKNM
CCEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEHHEECCHHHH
MPAILRILTAGVLAGVLIESGAAAKIAETIVEKIGESRALIALAIATMVLTMVGVFVDVS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VITVSPIALAIAHKSGLSKPAILLAMVGGGKAGNIMSPNPNTIAAADNLGVSLTNVMIAG
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
IVPAIFGVIITCILASRIKQKGSLVESDEHMKELTDMPGFLPAMVGPLVAIILLMLRPIA
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
GIAIDPLIALPVGGICGILAMGKIKHINKYATYGLAKMSGVAILLIGTGTLAGIIANSGL
CHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHCCCH
KDVIISGINALGLPSFMLAPVSGILMSAATASTTSGTAVATSVFGPTIVQLGVAPLATAA
HHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHH
MIHAGATVLDHLPHGSFFHATGGSVSMDMKERLKLIPYESLVGLTMTIVSTIIFGIILK
HHHHCHHHHHHCCCCCEEECCCCCEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVTVTALGAVIALVIAITLIIKKVHPAYGLILGALIGGLVGGAGLTGTVNLMMDGAKNM
CCEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEHHEECCHHHH
MPAILRILTAGVLAGVLIESGAAAKIAETIVEKIGESRALIALAIATMVLTMVGVFVDVS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
VITVSPIALAIAHKSGLSKPAILLAMVGGGKAGNIMSPNPNTIAAADNLGVSLTNVMIAG
HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
IVPAIFGVIITCILASRIKQKGSLVESDEHMKELTDMPGFLPAMVGPLVAIILLMLRPIA
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
GIAIDPLIALPVGGICGILAMGKIKHINKYATYGLAKMSGVAILLIGTGTLAGIIANSGL
CHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHCCCH
KDVIISGINALGLPSFMLAPVSGILMSAATASTTSGTAVATSVFGPTIVQLGVAPLATAA
HHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHH
MIHAGATVLDHLPHGSFFHATGGSVSMDMKERLKLIPYESLVGLTMTIVSTIIFGIILK
HHHHCHHHHHHCCCCCEEECCCCCEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]

Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]