| Definition | Beijerinckia indica subsp. indica ATCC 9039 chromosome, complete genome. |
|---|---|
| Accession | NC_010581 |
| Length | 4,170,153 |
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The map label for this gene is hisZ [H]
Identifier: 182678746
GI number: 182678746
Start: 2012027
End: 2013166
Strand: Reverse
Name: hisZ [H]
Synonym: Bind_1775
Alternate gene names: 182678746
Gene position: 2013166-2012027 (Counterclockwise)
Preceding gene: 182678747
Following gene: 182678745
Centisome position: 48.28
GC content: 60.96
Gene sequence:
>1140_bases GTGCCCGTTTCCTCTCCCTCTCTTATCGATGAGCCGCTCTTCGAGATGGCGGTCGCCGCTCGCCTTGTTGCCGCTGGTTA TCCGCGTTGCGAGCCAAAAATCCTGCAACCAGCCGCGATTTTCTTCGATTCGGGGGAGGATTTGCGCGGCCAACTTTATC TAACGAGTGATATTTCCGGCGCTGATTATTGCCTACGGCCTGAATATACTATTCCGGTTTCCCGCCTTTATCTCGACTCT CCGCAGGCTGGCTCGAGCGCCGGGTTTTCCTATTGCGGGCCGGTTTTCCGCTATCGCGGCGAACGGCCGAGCGAGTTCAT CCAGGCTGGGATCGAAAGTTTCGGCCGGCAGGATCGCGAAGCCGCTGATGCCGAAATTTTGGGCCTGGCGCTGGAAGCTG TTGGCGACTTCGCCGAGCGTCTTTCCGTTCGTATTACCGATGTCGGGCTGTTCACCGCTCTTCTCGACGCGCTGGAATTG CCGCCTCCCTGGCGGCGGCGGCTTTTGCGGGCGCAGGTTCTTGGCACGCCGTTCGACATGATTTTTGCCCCCACGGGGGA GAGCACGCAAACCGACCATTCTGGCGTGCTTGCGCTTCTCGATGGTGCCGACCGCCAGGGTGCGCGCGCGCTCGTCGAGG ATTTGCTCTCCATAGCGGGATTTGCCTCCATCAGCGGGCGCACGCCGGCCGAGATCGCTGATCGTTTTCTCGAACAGGCT GCCTTGAAATCGAGCCAGGGACTGGCATCTGAAAAGCGGCAGATTATCGAGCGCTTCCTCGCCATCGAGGGGGATCCTGA CCAGGCCTCGGAGGCCATGCGCCGTCTCCTGTCGGAGGCGGGTCTCGACCTGACGAGCATTCTCGACAGTTTCGATGCGC GGCTCGGCTTTATCGCCGCGCGCGGTCTCGATGTTTCGAGCCTGCATTTCGCGACGCGCTTCACCCGCAATCTGGATTAT TATACGGGCTTCGTCTTCGAGGCGCATGATCGGCTGCGGCCGCAGGAAAAGCCCGTCATTGGCGGCGGCCGTTACGACAA ATTATTGCGTCAACTGGGCGCGCCGCAGGATATTTCAGCGGTCGGCGCGGCGATCTGGATCGAGGCGCTTGACGCCATGA ACAAGGGCGGAGCCGCTTGA
Upstream 100 bases:
>100_bases TCTCCATCTTTGAAGAGAAAACGACATAATTTCTTTTCAAGAGAGAAAAGCATCCGGCCACATGGCATAAAGCAACTTGG CCTCGCGACGAGAACAGACC
Downstream 100 bases:
>100_bases TGAGTGAGATGCAGGCACCGCTCGTTCTGGCTGTCCCCTCCAAGGGGCGTTTACAGGAAAATGTCGCGGCCTTCTTCGCA CGCGCCGGGCTCAGCCTCGT
Product: tRNA synthetase class II (G H P and S)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MPVSSPSLIDEPLFEMAVAARLVAAGYPRCEPKILQPAAIFFDSGEDLRGQLYLTSDISGADYCLRPEYTIPVSRLYLDS PQAGSSAGFSYCGPVFRYRGERPSEFIQAGIESFGRQDREAADAEILGLALEAVGDFAERLSVRITDVGLFTALLDALEL PPPWRRRLLRAQVLGTPFDMIFAPTGESTQTDHSGVLALLDGADRQGARALVEDLLSIAGFASISGRTPAEIADRFLEQA ALKSSQGLASEKRQIIERFLAIEGDPDQASEAMRRLLSEAGLDLTSILDSFDARLGFIAARGLDVSSLHFATRFTRNLDY YTGFVFEAHDRLRPQEKPVIGGGRYDKLLRQLGAPQDISAVGAAIWIEALDAMNKGGAA
Sequences:
>Translated_379_residues MPVSSPSLIDEPLFEMAVAARLVAAGYPRCEPKILQPAAIFFDSGEDLRGQLYLTSDISGADYCLRPEYTIPVSRLYLDS PQAGSSAGFSYCGPVFRYRGERPSEFIQAGIESFGRQDREAADAEILGLALEAVGDFAERLSVRITDVGLFTALLDALEL PPPWRRRLLRAQVLGTPFDMIFAPTGESTQTDHSGVLALLDGADRQGARALVEDLLSIAGFASISGRTPAEIADRFLEQA ALKSSQGLASEKRQIIERFLAIEGDPDQASEAMRRLLSEAGLDLTSILDSFDARLGFIAARGLDVSSLHFATRFTRNLDY YTGFVFEAHDRLRPQEKPVIGGGRYDKLLRQLGAPQDISAVGAAIWIEALDAMNKGGAA >Mature_378_residues PVSSPSLIDEPLFEMAVAARLVAAGYPRCEPKILQPAAIFFDSGEDLRGQLYLTSDISGADYCLRPEYTIPVSRLYLDSP QAGSSAGFSYCGPVFRYRGERPSEFIQAGIESFGRQDREAADAEILGLALEAVGDFAERLSVRITDVGLFTALLDALELP PPWRRRLLRAQVLGTPFDMIFAPTGESTQTDHSGVLALLDGADRQGARALVEDLLSIAGFASISGRTPAEIADRFLEQAA LKSSQGLASEKRQIIERFLAIEGDPDQASEAMRRLLSEAGLDLTSILDSFDARLGFIAARGLDVSSLHFATRFTRNLDYY TGFVFEAHDRLRPQEKPVIGGGRYDKLLRQLGAPQDISAVGAAIWIEALDAMNKGGAA
Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine [H]
COG id: COG3705
COG function: function code E; ATP phosphoribosyltransferase involved in histidine biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004516 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41137; Mature: 41006
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSSPSLIDEPLFEMAVAARLVAAGYPRCEPKILQPAAIFFDSGEDLRGQLYLTSDISG CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEECCCCCCCEEEEEEECCCC ADYCLRPEYTIPVSRLYLDSPQAGSSAGFSYCGPVFRYRGERPSEFIQAGIESFGRQDRE CCEEECCCCCCCHHHEEECCCCCCCCCCCHHHCHHHHHCCCCHHHHHHHHHHHHCCCHHH AADAEILGLALEAVGDFAERLSVRITDVGLFTALLDALELPPPWRRRLLRAQVLGTPFDM HHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHE IFAPTGESTQTDHSGVLALLDGADRQGARALVEDLLSIAGFASISGRTPAEIADRFLEQA EEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ALKSSQGLASEKRQIIERFLAIEGDPDQASEAMRRLLSEAGLDLTSILDSFDARLGFIAA HHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC RGLDVSSLHFATRFTRNLDYYTGFVFEAHDRLRPQEKPVIGGGRYDKLLRQLGAPQDISA CCCCHHHHHHHHHHHHCCHHHHCEEEECHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHH VGAAIWIEALDAMNKGGAA HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PVSSPSLIDEPLFEMAVAARLVAAGYPRCEPKILQPAAIFFDSGEDLRGQLYLTSDISG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEECCCCCCCEEEEEEECCCC ADYCLRPEYTIPVSRLYLDSPQAGSSAGFSYCGPVFRYRGERPSEFIQAGIESFGRQDRE CCEEECCCCCCCHHHEEECCCCCCCCCCCHHHCHHHHHCCCCHHHHHHHHHHHHCCCHHH AADAEILGLALEAVGDFAERLSVRITDVGLFTALLDALELPPPWRRRLLRAQVLGTPFDM HHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHE IFAPTGESTQTDHSGVLALLDGADRQGARALVEDLLSIAGFASISGRTPAEIADRFLEQA EEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ALKSSQGLASEKRQIIERFLAIEGDPDQASEAMRRLLSEAGLDLTSILDSFDARLGFIAA HHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC RGLDVSSLHFATRFTRNLDYYTGFVFEAHDRLRPQEKPVIGGGRYDKLLRQLGAPQDISA CCCCHHHHHHHHHHHHCCHHHHCEEEECHHHCCCCCCCCCCCCHHHHHHHHHCCCCCHHH VGAAIWIEALDAMNKGGAA HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA