| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is zitB [H]
Identifier: 17547491
GI number: 17547491
Start: 2982691
End: 2983611
Strand: Reverse
Name: zitB [H]
Synonym: RSc2772
Alternate gene names: 17547491
Gene position: 2983611-2982691 (Counterclockwise)
Preceding gene: 17547492
Following gene: 17547490
Centisome position: 80.28
GC content: 70.68
Gene sequence:
>921_bases ATGAGCCACGCCGCCCAGCCGACCCTGCACGGACACGACGCCGCAGCATGGCGCCATTCGCACCGCTTCGTGGAAGACCG CCCGCGCGCCGAGCGCCGCACGCTGTACGCCGTGCAGCTGACGGCGGCGGTGATGATGGCGGAGATCGTCGGCGGCTGGT GGACCGGCTCGATGGCGCTGCTGGCCGACGGCTGGCACATGAGCACGCACGTGCTGGCGCTGGGCATCGCGCTGGTGGCC TACGTGATCGCGCGCCGCCTGGGCGAAGACCCGCGCTTCACCTTCGGCACCTGGAAGATCGAGATCCTCGGCAGCTTCGC CAGCGCGCTGCTGCTGGGCGTGGTGGGCGTGCTGATGGCGGTGGAGTTGGCGCAGCGTCTGCTCGCGCCGGTCGGCATCC ATTACAGCGAGGCCCTGTGGGTCACGGCCGTCGGTCTGGCGGTCAACGTCGTCTGCGCCCTGCGGCTGGCCGGCGCGCAC GACCATGACCACGGCCATGCCCATGCGTCCGGGCCGGCGGCAGGCACGCGCCGCCATGACGACGACCGCGATCGCGACAG AGAGCGCGACAAGGAGCGCGACGACACCCACGAACACGAGACCCGCCATCGCGACCACGACCGCGACCATCGCCATGAGC ACGATCACAAGCACGAGCCGGAACACGACCACGATGAGCATCGCCATCGGGACCATCCGCAGGAGGCCGCGTTGCATCGC CGCAGCCACGCCGCGCGTGCGCACGCGCATGGCGATCATGGCCACCCCCATCATCACCACGACCTGAACCTGCGCGCCGC CTATCTGCACGTCGTGGCCGATGCGGCGACGTCGGTGCTGGCGGCTGATGGCGCTGTTCGCCGGCAAGTACCTGGGGCTG CGCTGGATCGACTCGGTGGTCGGGATCGTCGGCGCGGGTGA
Upstream 100 bases:
>100_bases TTCGCCGACGCCGCCCGCGGTGTCGCGCAGGCCACGCGCGACCAGATCAACCAGTACCGCAACTGACCGGCCAGCCCGGC CCGGTTGCCGCGAGGACGCC
Downstream 100 bases:
>100_bases TCGGGCAGTGGGCCTACAGCCTGCTCAGGCGCGCGGGCAGCGTGCTGCTGGATCGCGGCGACGTGCCGGAGCTGCAGGAT GCCGTCCGGCGCGCGCTGGA
Product: metal transport transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSHAAQPTLHGHDAAAWRHSHRFVEDRPRAERRTLYAVQLTAAVMMAEIVGGWWTGSMALLADGWHMSTHVLALGIALVA YVIARRLGEDPRFTFGTWKIEILGSFASALLLGVVGVLMAVELAQRLLAPVGIHYSEALWVTAVGLAVNVVCALRLAGAH DHDHGHAHASGPAAGTRRHDDDRDRDRERDKERDDTHEHETRHRDHDRDHRHEHDHKHEPEHDHDEHRHRDHPQEAALHR RSHAARAHAHGDHGHPHHHHDLNLRAAYLHVVADAATSVLAADGAVRRQVPGAALDRLGGRDRRRG
Sequences:
>Translated_306_residues MSHAAQPTLHGHDAAAWRHSHRFVEDRPRAERRTLYAVQLTAAVMMAEIVGGWWTGSMALLADGWHMSTHVLALGIALVA YVIARRLGEDPRFTFGTWKIEILGSFASALLLGVVGVLMAVELAQRLLAPVGIHYSEALWVTAVGLAVNVVCALRLAGAH DHDHGHAHASGPAAGTRRHDDDRDRDRERDKERDDTHEHETRHRDHDRDHRHEHDHKHEPEHDHDEHRHRDHPQEAALHR RSHAARAHAHGDHGHPHHHHDLNLRAAYLHVVADAATSVLAADGAVRRQVPGAALDRLGGRDRRRG >Mature_305_residues SHAAQPTLHGHDAAAWRHSHRFVEDRPRAERRTLYAVQLTAAVMMAEIVGGWWTGSMALLADGWHMSTHVLALGIALVAY VIARRLGEDPRFTFGTWKIEILGSFASALLLGVVGVLMAVELAQRLLAPVGIHYSEALWVTAVGLAVNVVCALRLAGAHD HDHGHAHASGPAAGTRRHDDDRDRDRERDKERDDTHEHETRHRDHDRDHRHEHDHKHEPEHDHDEHRHRDHPQEAALHRR SHAARAHAHGDHGHPHHHHDLNLRAAYLHVVADAATSVLAADGAVRRQVPGAALDRLGGRDRRRG
Specific function: Involved in zinc efflux across the cytoplasmic membrane, thus reducing zinc accumulation in the cytoplasm and rendering bacteria more resistant to zinc. It may contribute to zinc homeostasis at low concentrations of zinc [H]
COG id: COG1230
COG function: function code P; Co/Zn/Cd efflux system component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily [H]
Homologues:
Organism=Homo sapiens, GI222080086, Length=278, Percent_Identity=23.3812949640288, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI40255009, Length=278, Percent_Identity=23.3812949640288, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1786966, Length=120, Percent_Identity=37.5, Blast_Score=64, Evalue=9e-12, Organism=Caenorhabditis elegans, GI32564488, Length=122, Percent_Identity=36.0655737704918, Blast_Score=74, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6323899, Length=255, Percent_Identity=28.2352941176471, Blast_Score=85, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6324892, Length=260, Percent_Identity=25.7692307692308, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24585900, Length=276, Percent_Identity=23.5507246376812, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24585898, Length=276, Percent_Identity=23.5507246376812, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24585896, Length=276, Percent_Identity=23.5507246376812, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI19921672, Length=276, Percent_Identity=23.5507246376812, Blast_Score=74, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 34206; Mature: 34074
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHAAQPTLHGHDAAAWRHSHRFVEDRPRAERRTLYAVQLTAAVMMAEIVGGWWTGSMAL CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHH LADGWHMSTHVLALGIALVAYVIARRLGEDPRFTFGTWKIEILGSFASALLLGVVGVLMA HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECEEEHHHHHHHHHHHHHHHHHHHHH VELAQRLLAPVGIHYSEALWVTAVGLAVNVVCALRLAGAHDHDHGHAHASGPAAGTRRHD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC DDRDRDRERDKERDDTHEHETRHRDHDRDHRHEHDHKHEPEHDHDEHRHRDHPQEAALHR CCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHH RSHAARAHAHGDHGHPHHHHDLNLRAAYLHVVADAATSVLAADGAVRRQVPGAALDRLGG HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCC RDRRRG CCCCCC >Mature Secondary Structure SHAAQPTLHGHDAAAWRHSHRFVEDRPRAERRTLYAVQLTAAVMMAEIVGGWWTGSMAL CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHH LADGWHMSTHVLALGIALVAYVIARRLGEDPRFTFGTWKIEILGSFASALLLGVVGVLMA HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECEEEHHHHHHHHHHHHHHHHHHHHH VELAQRLLAPVGIHYSEALWVTAVGLAVNVVCALRLAGAHDHDHGHAHASGPAAGTRRHD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC DDRDRDRERDKERDDTHEHETRHRDHDRDHRHEHDHKHEPEHDHDEHRHRDHPQEAALHR CCHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHH RSHAARAHAHGDHGHPHHHHDLNLRAAYLHVVADAATSVLAADGAVRRQVPGAALDRLGG HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCC RDRRRG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]