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The map label for this gene is pyrF [H]

Identifier: 17547492

GI number: 17547492

Start: 2983646

End: 2984512

Strand: Reverse

Name: pyrF [H]

Synonym: RSc2773

Alternate gene names: 17547492

Gene position: 2984512-2983646 (Counterclockwise)

Preceding gene: 17547494

Following gene: 17547491

Centisome position: 80.31

GC content: 68.28

Gene sequence:

>867_bases
ATGCCAGCAAGCCATGCGGCAGCCCGCCGCGCCTCACTATTTCCCGACACCATGCGATTCACCGAACAATTGGCTGCCGC
CTGGCAGCGCAACAATTCCCTGCTGTGCGTGGGGCTGGACCCGGACCCGGCGCGCCTGCCGGCGTCGCTGACCACCTCGG
GCGGGGCGATCTTCTCGTTCTGCCGCGCCATCGTCGACGCCACCGCCGACCTGGTCTGCGCGTTCAAGCCGCAGATCGCC
TATTTCGCCTCGCAGCGCGCCGAAGACCAGCTCGAGCAACTGATCGCGTACATCCACGAGGCCTATCCCGGCATCCCCGT
CATCCTCGACGCCAAGCGCGGCGACATCGGCTCCACCGCCGAGCACTATGCCAAGGAAGCCTTCGAGCGCTACCAGGCGG
ACGCCGTCACAGTCAGCCCCTACATGGGCTTCGACTCGATGCAGCCGTACCTGGTGCATCCCGACAAGGGCGTGATCGTG
CTGTGCCGCACCTCCAACGCCGGCGGCAGTGACGTGCAGTTCCTCGAGACGAACGGCCGCCCGGTCTATCAGGTGGTGGC
CGAGCGCGCTCGCGACGCGTGGAATACCAGCGGCCAGATGGGCCTGGTGGTGGGCGCGACCTTCCCGCAGGAAATCCGGC
GGGTGCGCGAGATCGTCGGCGACATGCCGCTGCTGATCCCGGGCATCGGCGTCCAGGGCGGCGACATCGAGGCCACCGTG
CGCGCCGGCCGCACCGCCGACGGCACCGGCATGATGATCAACTCGTCGCGCGCCATCCTGTACGCCAGCAGCGACAGCGA
TTTCGCCGACGCCGCCCGCGGTGTCGCGCAGGCCACGCGCGACCAGATCAACCAGTACCGCAACTGA

Upstream 100 bases:

>100_bases
AGACGCAGCGGATTCAGCCGGAAACGGCGGATCGGCCGGCATGCGTGGGGTCCATGCGACGCCCAGGGAGATACCGCCGC
AGCGGTGGCCGGCGGGTAAA

Downstream 100 bases:

>100_bases
CCGGCCAGCCCGGCCCGGTTGCCGCGAGGACGCCATGAGCCACGCCGCCCAGCCGACCCTGCACGGACACGACGCCGCAG
CATGGCGCCATTCGCACCGC

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MPASHAAARRASLFPDTMRFTEQLAAAWQRNNSLLCVGLDPDPARLPASLTTSGGAIFSFCRAIVDATADLVCAFKPQIA
YFASQRAEDQLEQLIAYIHEAYPGIPVILDAKRGDIGSTAEHYAKEAFERYQADAVTVSPYMGFDSMQPYLVHPDKGVIV
LCRTSNAGGSDVQFLETNGRPVYQVVAERARDAWNTSGQMGLVVGATFPQEIRRVREIVGDMPLLIPGIGVQGGDIEATV
RAGRTADGTGMMINSSRAILYASSDSDFADAARGVAQATRDQINQYRN

Sequences:

>Translated_288_residues
MPASHAAARRASLFPDTMRFTEQLAAAWQRNNSLLCVGLDPDPARLPASLTTSGGAIFSFCRAIVDATADLVCAFKPQIA
YFASQRAEDQLEQLIAYIHEAYPGIPVILDAKRGDIGSTAEHYAKEAFERYQADAVTVSPYMGFDSMQPYLVHPDKGVIV
LCRTSNAGGSDVQFLETNGRPVYQVVAERARDAWNTSGQMGLVVGATFPQEIRRVREIVGDMPLLIPGIGVQGGDIEATV
RAGRTADGTGMMINSSRAILYASSDSDFADAARGVAQATRDQINQYRN
>Mature_287_residues
PASHAAARRASLFPDTMRFTEQLAAAWQRNNSLLCVGLDPDPARLPASLTTSGGAIFSFCRAIVDATADLVCAFKPQIAY
FASQRAEDQLEQLIAYIHEAYPGIPVILDAKRGDIGSTAEHYAKEAFERYQADAVTVSPYMGFDSMQPYLVHPDKGVIVL
CRTSNAGGSDVQFLETNGRPVYQVVAERARDAWNTSGQMGLVVGATFPQEIRRVREIVGDMPLLIPGIGVQGGDIEATVR
AGRTADGTGMMINSSRAILYASSDSDFADAARGVAQATRDQINQYRN

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR018089
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 31125; Mature: 30994

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00156 OMPDECASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASHAAARRASLFPDTMRFTEQLAAAWQRNNSLLCVGLDPDPARLPASLTTSGGAIFSF
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCHHHHHH
CRAIVDATADLVCAFKPQIAYFASQRAEDQLEQLIAYIHEAYPGIPVILDAKRGDIGSTA
HHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHH
EHYAKEAFERYQADAVTVSPYMGFDSMQPYLVHPDKGVIVLCRTSNAGGSDVQFLETNGR
HHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCC
PVYQVVAERARDAWNTSGQMGLVVGATFPQEIRRVREIVGDMPLLIPGIGVQGGDIEATV
HHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEE
RAGRTADGTGMMINSSRAILYASSDSDFADAARGVAQATRDQINQYRN
ECCCCCCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PASHAAARRASLFPDTMRFTEQLAAAWQRNNSLLCVGLDPDPARLPASLTTSGGAIFSF
CCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCHHHHHH
CRAIVDATADLVCAFKPQIAYFASQRAEDQLEQLIAYIHEAYPGIPVILDAKRGDIGSTA
HHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHH
EHYAKEAFERYQADAVTVSPYMGFDSMQPYLVHPDKGVIVLCRTSNAGGSDVQFLETNGR
HHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEEEECCCC
PVYQVVAERARDAWNTSGQMGLVVGATFPQEIRRVREIVGDMPLLIPGIGVQGGDIEATV
HHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEE
RAGRTADGTGMMINSSRAILYASSDSDFADAARGVAQATRDQINQYRN
ECCCCCCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA