| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is 17547490
Identifier: 17547490
GI number: 17547490
Start: 2982494
End: 2982694
Strand: Reverse
Name: 17547490
Synonym: RSc2771
Alternate gene names: NA
Gene position: 2982694-2982494 (Counterclockwise)
Preceding gene: 17547491
Following gene: 17547486
Centisome position: 80.26
GC content: 72.14
Gene sequence:
>201_bases GTGATCGGGCAGTGGGCCTACAGCCTGCTCAGGCGCGCGGGCAGCGTGCTGCTGGATCGCGGCGACGTGCCGGAGCTGCA GGATGCCGTCCGGCGCGCGCTGGAAATCGAGCCCGGCGTAGTGGTGAACGACCTGCACCTGTGGCGCGTCGGGCCGGGCA GGTTCGCCTGCGTGATCGCGCTGGCCAGCCCGTCGCCGTAA
Upstream 100 bases:
>100_bases CCGATGCGGCGACGTCGGTGCTGGCGGCTGATGGCGCTGTTCGCCGGCAAGTACCTGGGGCTGCGCTGGATCGACTCGGT GGTCGGGATCGTCGGCGCGG
Downstream 100 bases:
>100_bases AGCCCGGGCCATTACAAGGCCAGGATGGCGCATGTCGACGTGCTCGCCCACGTGACCGTGGATGTGAACCACTGCTGCGA ACTGGCCAGGCAGGTGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MIGQWAYSLLRRAGSVLLDRGDVPELQDAVRRALEIEPGVVVNDLHLWRVGPGRFACVIALASPSP
Sequences:
>Translated_66_residues MIGQWAYSLLRRAGSVLLDRGDVPELQDAVRRALEIEPGVVVNDLHLWRVGPGRFACVIALASPSP >Mature_66_residues MIGQWAYSLLRRAGSVLLDRGDVPELQDAVRRALEIEPGVVVNDLHLWRVGPGRFACVIALASPSP
Specific function: Unknown
COG id: COG1230
COG function: function code P; Co/Zn/Cd efflux system component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7208; Mature: 7208
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGQWAYSLLRRAGSVLLDRGDVPELQDAVRRALEIEPGVVVNDLHLWRVGPGRFACVIA CCCHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCCCEEECCEEEEEECCCCEEEEEE LASPSP ECCCCC >Mature Secondary Structure MIGQWAYSLLRRAGSVLLDRGDVPELQDAVRRALEIEPGVVVNDLHLWRVGPGRFACVIA CCCHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHCCCCCEEECCEEEEEECCCCEEEEEE LASPSP ECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA