Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

Click here to switch to the map view.

The map label for this gene is 17546541

Identifier: 17546541

GI number: 17546541

Start: 1990746

End: 1991504

Strand: Reverse

Name: 17546541

Synonym: RSc1822

Alternate gene names: NA

Gene position: 1991504-1990746 (Counterclockwise)

Preceding gene: 17546542

Following gene: 17546540

Centisome position: 53.59

GC content: 67.59

Gene sequence:

>759_bases
GTGAGTACCGCTCGCGCCTACCGCATCGGCCAGATCGTGCCGTCCTCGAACACCACCATGGAGACCGAAATTCCGGCCAT
CCTGCGTGCCCGCGAATTGACGCAGCCGGAGCGCTTCACGTTCCACTCCAGCCGCATGCGCATGAAGCACGTCACCAAGG
AAGAGCTGGCGGCGATGGACGCCGACAGCGACCGCTGCGCGCTCGAGCTCTCCGACGCGCGCGTCGACGTGCTGGGCTAC
GCCTGCCTGGTGGCGATCATGAGCATGGGGCTCGGCTATCACCGCGTCTCGCAAGCGCGGCTGCACCAGCGCACGCAGGA
GAACGGCGGCCCCGCCCCCGTGGTCACGAGCGCCGGCGCGCTGGTCGACGGCCTGAAGGCCATCGGCGCCCGCAAGGTGT
CGCTGCTGGCGCCCTACATGAAGCCGCTGACGCAGCTGGTGATCGACTACATCGAGAACGAAGGCATCGAGGTCGTCGAC
AGCATCTCGCTGGAGATTCCCGACAACCTGGAGGTGGGCCGGCAAGACCCGCGCGCGCCCATCGAGATCACCAAGCGGCT
CAAGACCACGGGCGTCGATGCCATCGTCGCCTCGGCGTGCGTGCAGATGCCATCGCTGCCGTCGGTGCAGGCCATCGAGG
ATCGCACCGGCCTGCCCGTGCTGTCTTCGTCCGTGGCCACCACCTACCTGATGCTCAAGCGGCTGGGCCTGGACACCAAG
GTGCCCGGCTTCGGCTCGTTGCTGTCGGGAGCGTACTGA

Upstream 100 bases:

>100_bases
GCAAGCCGCTGCGGGCCGCGCAGTTCGACGACGCCATCGACCCGGACAGCGGCGCCATCGCCGCTGAATCCGCCCCCGAC
TCGAACCTGGAGAATCTCTC

Downstream 100 bases:

>100_bases
CCATGGCGCGGGGGGCGGATCGTCCCGCCTCCACCGGGGAGGGGCAGGTAGAATCGCCGCTGTTTCCAGCGGATGACGAG
GCAGCGAAGGGCATGACCCG

Product: maleate cis-trans isomerase

Products: fumarate

Alternate protein names: Asp/Glu/Hydantoin Racemase; Maleate Cis-Trans Isomerase; Arylmalonate Decarboxylase; Asp/Glu/Hydantoin Racemase Family Protein; Ectoine Utilization Protein EutA; Maleate Cis-Trans Isomerase Protein; Arylmalonate Decarboxylase Protein; Asp/Glu/Hydantoin Racemase Family; Asp/Glu/Hydantoin Racemase Superfamily; Racemase; Decarboxylase; Maleate Isomerase; Pyridoxal-5-Phosphate-Dependent Beta Subunit; Cis-Trans Isomerase

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSTARAYRIGQIVPSSNTTMETEIPAILRARELTQPERFTFHSSRMRMKHVTKEELAAMDADSDRCALELSDARVDVLGY
ACLVAIMSMGLGYHRVSQARLHQRTQENGGPAPVVTSAGALVDGLKAIGARKVSLLAPYMKPLTQLVIDYIENEGIEVVD
SISLEIPDNLEVGRQDPRAPIEITKRLKTTGVDAIVASACVQMPSLPSVQAIEDRTGLPVLSSSVATTYLMLKRLGLDTK
VPGFGSLLSGAY

Sequences:

>Translated_252_residues
MSTARAYRIGQIVPSSNTTMETEIPAILRARELTQPERFTFHSSRMRMKHVTKEELAAMDADSDRCALELSDARVDVLGY
ACLVAIMSMGLGYHRVSQARLHQRTQENGGPAPVVTSAGALVDGLKAIGARKVSLLAPYMKPLTQLVIDYIENEGIEVVD
SISLEIPDNLEVGRQDPRAPIEITKRLKTTGVDAIVASACVQMPSLPSVQAIEDRTGLPVLSSSVATTYLMLKRLGLDTK
VPGFGSLLSGAY
>Mature_251_residues
STARAYRIGQIVPSSNTTMETEIPAILRARELTQPERFTFHSSRMRMKHVTKEELAAMDADSDRCALELSDARVDVLGYA
CLVAIMSMGLGYHRVSQARLHQRTQENGGPAPVVTSAGALVDGLKAIGARKVSLLAPYMKPLTQLVIDYIENEGIEVVDS
ISLEIPDNLEVGRQDPRAPIEITKRLKTTGVDAIVASACVQMPSLPSVQAIEDRTGLPVLSSSVATTYLMLKRLGLDTKV
PGFGSLLSGAY

Specific function: Unknown

COG id: COG3473

COG function: function code Q; Maleate cis-trans isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.2.1.1

Molecular weight: Translated: 27268; Mature: 27137

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTARAYRIGQIVPSSNTTMETEIPAILRARELTQPERFTFHSSRMRMKHVTKEELAAMD
CCCCHHEECCEEECCCCCEEHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHCC
ADSDRCALELSDARVDVLGYACLVAIMSMGLGYHRVSQARLHQRTQENGGPAPVVTSAGA
CCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCHH
LVDGLKAIGARKVSLLAPYMKPLTQLVIDYIENEGIEVVDSISLEIPDNLEVGRQDPRAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCH
IEITKRLKTTGVDAIVASACVQMPSLPSVQAIEDRTGLPVLSSSVATTYLMLKRLGLDTK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
VPGFGSLLSGAY
CCCHHHHHCCCC
>Mature Secondary Structure 
STARAYRIGQIVPSSNTTMETEIPAILRARELTQPERFTFHSSRMRMKHVTKEELAAMD
CCCHHEECCEEECCCCCEEHHHHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHCC
ADSDRCALELSDARVDVLGYACLVAIMSMGLGYHRVSQARLHQRTQENGGPAPVVTSAGA
CCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHCCHH
LVDGLKAIGARKVSLLAPYMKPLTQLVIDYIENEGIEVVDSISLEIPDNLEVGRQDPRAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCH
IEITKRLKTTGVDAIVASACVQMPSLPSVQAIEDRTGLPVLSSSVATTYLMLKRLGLDTK
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCC
VPGFGSLLSGAY
CCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: maleate

Specific reaction: maleate = fumarate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA