Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17231418

Identifier: 17231418

GI number: 17231418

Start: 4738226

End: 4739554

Strand: Direct

Name: 17231418

Synonym: alr3926

Alternate gene names: NA

Gene position: 4738226-4739554 (Clockwise)

Preceding gene: 17231417

Following gene: 17231422

Centisome position: 73.88

GC content: 36.79

Gene sequence:

>1329_bases
ATGCTGTTTGAATTTATCTCTACTATTAAAGCGGGCATTGACTCTGGTCAATACTTGGAAATATTGAGTAATGGGATACC
CATTGGTATAGTACGTGATACTACAAGTGGAAGTTTTCTTGCTTATGCGGTTGGTGCTATAGCTAGTAATCATCCTTTAC
TACCACTAACTGTACCTATTCAGTTCCTAATCCCCGGAGTAAATATGGTACAGGATTACATAGCTTTTCCACAAAGTTAT
CAGCAAAGTAGTTCTCTACAAACTGTATTAAAATCACTTCAAACAAATATAAGCGTTCTGCAAGCAACTATAGCCTTGAT
TGAATTAGGTAAAATACCGAGTGTCGCATTAGAAGCAGTCAACTTACGCCAGACACTCAAGCTTAAAAAAGAAGTTGAAG
AAATGCAACTTGAACTTAAAAACGGCTTTATTGATTTGCAAAAAGCTCTCAAAGCTCAAGGAGCAGAAGTTAGACAAATA
GTCAAAGAAGTAGTCCATGATATTAATTTTGAACAACATTGTACAGTTTTAGGACGTGCCTATAGCCTGTTTATGCAGGC
GTGTAATCGGTTACAATCAGCGATGGAATCACCAGATATCAGTCAAAGAAAGTCCGAAATTGATAGTGCAAGAGAAATGT
TCCTTGAGGTTTTAGCCGATTACATTAATCCTCAAATATTGGAAAAAGTCTCCGCGCCGGGACAACTTCGCAGATTTGAA
TGTGCTTGGGCAATTGAACAAGCAATTGTTATCACATACCAAGTACAGAATCAGGTGGCATTTGTTAGCGATCGCCTCTG
CCATCTCCGCGATAAAATTAAAGAACACATCTGTACAGTGATTAACAATTGTGAAACCTACGATGAGCTGAATTTTCTGT
TTCCCGAAATAAGTCGCGTTTGTAAACATGATTTACCTATTTTGGAAGTATGGCAAGCACGAGTTGATTGGCTCAGGTCA
CTTTCGCCAGTGGAGATAAAACTTTTAGCAAAAAACAATTGCAACGATTCTGAACTTGCAGATACTTTAGTTACTAATCA
AACTAAAATTGTGTTATCAGTACCACCCGAACAATTAGTATATGAAGATTTAGCAGAAAAATCCCATTTTTACTCTCTGC
TTGATCAGATGATATTTATGTTTAAGCCTGTTTTACGTCAGGAGTACGAAGTTTATATCAATCAACAAGCTCAAGCGGCG
GGTCATAAGATATTAATTCCCAAAAACCTACAACAAGTCTCTGATATGACTGTTGCAAATCTTTATTACTATTTTAAGGT
AAGAGATGAATCTAATATAGAAGAAACTCTAGAGGCAATAACAGCATAA

Upstream 100 bases:

>100_bases
TTAGTAATTATTTTATTTGTGATCACAGTTTTTTACTGTCTGGTTGCTTCTTCAGGGTTTTTCGGTTCAGGTGCAACATC
TACCTTTCATAAAGTAAAAT

Downstream 100 bases:

>100_bases
TCTCTCTAAAAAATTTAGGGCTTGTTGGCAAGTAAATTAATCAAGCCGTTAGTATAAGTACAAATTAGACGTACAACATT
GCTGATTTTTTGGCGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MLFEFISTIKAGIDSGQYLEILSNGIPIGIVRDTTSGSFLAYAVGAIASNHPLLPLTVPIQFLIPGVNMVQDYIAFPQSY
QQSSSLQTVLKSLQTNISVLQATIALIELGKIPSVALEAVNLRQTLKLKKEVEEMQLELKNGFIDLQKALKAQGAEVRQI
VKEVVHDINFEQHCTVLGRAYSLFMQACNRLQSAMESPDISQRKSEIDSAREMFLEVLADYINPQILEKVSAPGQLRRFE
CAWAIEQAIVITYQVQNQVAFVSDRLCHLRDKIKEHICTVINNCETYDELNFLFPEISRVCKHDLPILEVWQARVDWLRS
LSPVEIKLLAKNNCNDSELADTLVTNQTKIVLSVPPEQLVYEDLAEKSHFYSLLDQMIFMFKPVLRQEYEVYINQQAQAA
GHKILIPKNLQQVSDMTVANLYYYFKVRDESNIEETLEAITA

Sequences:

>Translated_442_residues
MLFEFISTIKAGIDSGQYLEILSNGIPIGIVRDTTSGSFLAYAVGAIASNHPLLPLTVPIQFLIPGVNMVQDYIAFPQSY
QQSSSLQTVLKSLQTNISVLQATIALIELGKIPSVALEAVNLRQTLKLKKEVEEMQLELKNGFIDLQKALKAQGAEVRQI
VKEVVHDINFEQHCTVLGRAYSLFMQACNRLQSAMESPDISQRKSEIDSAREMFLEVLADYINPQILEKVSAPGQLRRFE
CAWAIEQAIVITYQVQNQVAFVSDRLCHLRDKIKEHICTVINNCETYDELNFLFPEISRVCKHDLPILEVWQARVDWLRS
LSPVEIKLLAKNNCNDSELADTLVTNQTKIVLSVPPEQLVYEDLAEKSHFYSLLDQMIFMFKPVLRQEYEVYINQQAQAA
GHKILIPKNLQQVSDMTVANLYYYFKVRDESNIEETLEAITA
>Mature_442_residues
MLFEFISTIKAGIDSGQYLEILSNGIPIGIVRDTTSGSFLAYAVGAIASNHPLLPLTVPIQFLIPGVNMVQDYIAFPQSY
QQSSSLQTVLKSLQTNISVLQATIALIELGKIPSVALEAVNLRQTLKLKKEVEEMQLELKNGFIDLQKALKAQGAEVRQI
VKEVVHDINFEQHCTVLGRAYSLFMQACNRLQSAMESPDISQRKSEIDSAREMFLEVLADYINPQILEKVSAPGQLRRFE
CAWAIEQAIVITYQVQNQVAFVSDRLCHLRDKIKEHICTVINNCETYDELNFLFPEISRVCKHDLPILEVWQARVDWLRS
LSPVEIKLLAKNNCNDSELADTLVTNQTKIVLSVPPEQLVYEDLAEKSHFYSLLDQMIFMFKPVLRQEYEVYINQQAQAA
GHKILIPKNLQQVSDMTVANLYYYFKVRDESNIEETLEAITA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50117; Mature: 50117

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFEFISTIKAGIDSGQYLEILSNGIPIGIVRDTTSGSFLAYAVGAIASNHPLLPLTVPI
CHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCH
QFLIPGVNMVQDYIAFPQSYQQSSSLQTVLKSLQTNISVLQATIALIELGKIPSVALEAV
HHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
NLRQTLKLKKEVEEMQLELKNGFIDLQKALKAQGAEVRQIVKEVVHDINFEQHCTVLGRA
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH
YSLFMQACNRLQSAMESPDISQRKSEIDSAREMFLEVLADYINPQILEKVSAPGQLRRFE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHH
CAWAIEQAIVITYQVQNQVAFVSDRLCHLRDKIKEHICTVINNCETYDELNFLFPEISRV
HHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
CKHDLPILEVWQARVDWLRSLSPVEIKLLAKNNCNDSELADTLVTNQTKIVLSVPPEQLV
HHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHH
YEDLAEKSHFYSLLDQMIFMFKPVLRQEYEVYINQQAQAAGHKILIPKNLQQVSDMTVAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEECCCHHHHHHHHHHEE
LYYYFKVRDESNIEETLEAITA
EEEEEEECCCCCHHHHHHHHCC
>Mature Secondary Structure
MLFEFISTIKAGIDSGQYLEILSNGIPIGIVRDTTSGSFLAYAVGAIASNHPLLPLTVPI
CHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCH
QFLIPGVNMVQDYIAFPQSYQQSSSLQTVLKSLQTNISVLQATIALIELGKIPSVALEAV
HHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
NLRQTLKLKKEVEEMQLELKNGFIDLQKALKAQGAEVRQIVKEVVHDINFEQHCTVLGRA
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH
YSLFMQACNRLQSAMESPDISQRKSEIDSAREMFLEVLADYINPQILEKVSAPGQLRRFE
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHH
CAWAIEQAIVITYQVQNQVAFVSDRLCHLRDKIKEHICTVINNCETYDELNFLFPEISRV
HHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
CKHDLPILEVWQARVDWLRSLSPVEIKLLAKNNCNDSELADTLVTNQTKIVLSVPPEQLV
HHCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHHH
YEDLAEKSHFYSLLDQMIFMFKPVLRQEYEVYINQQAQAAGHKILIPKNLQQVSDMTVAN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEECCCHHHHHHHHHHEE
LYYYFKVRDESNIEETLEAITA
EEEEEEECCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA