Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is msrA

Identifier: 170755766

GI number: 170755766

Start: 2054946

End: 2055419

Strand: Reverse

Name: msrA

Synonym: CLD_2703

Alternate gene names: 170755766

Gene position: 2055419-2054946 (Counterclockwise)

Preceding gene: 170754560

Following gene: 170754979

Centisome position: 51.93

GC content: 31.22

Gene sequence:

>474_bases
ATGAAAGAAATAGTTTTAGCTGGAGGTTGTTTTTGGGGAGTAGAAGAATATATGTCGAGAATTAAAGGCATAGTGGAAAC
AAAAGTAGGTTATGCTAATGGAATAAAAGAAAACCCTAGTTATGAAGAGGTATGCAGTGGAACCACAGGTCATGCAGAAG
CTTGTTATATAAAATATGATGAAAGTATTATATCCTTAGAAGAACTGTTAAATAAATTTTGGAGCATAATAGATCCAACA
GTACTAAATAAACAGGGTAACGATAGAGGAACCCAGTATAGAACAGGTATATTTTACTTAGATCAAAAAGATTTAAATGT
AATTATAAAGAGTAAATCTCAGGAGCAGAAAAATTATAGAAAGCCTATAGTTACTGAAGTAGAGCCCCTAAAGTGTTTTT
ATGAGGCTGAAGAGTATCACCAAAAATATTTAAAGAAAAATCCAGGAGGTTATTGTCATATACATTTAGATTAA

Upstream 100 bases:

>100_bases
AAAGTGTTTCTAAACTTAATTATGAAGTAATATATAAAGTTTAAGTAATTGCTAGTTGAAGTTATTAAGAGTTCTTAAAG
AAATTATGGAGGTGTTAATT

Downstream 100 bases:

>100_bases
TTTTTATTATATGTTTTATAGGGTATGTAGGTAGATTTGTGTAAAAACAAATTTACCTACATACCCTATAAAGAGAATGT
AAATAATTTTATATATTTGT

Product: methionine sulfoxide reductase A

Products: NA

Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKEIVLAGGCFWGVEEYMSRIKGIVETKVGYANGIKENPSYEEVCSGTTGHAEACYIKYDESIISLEELLNKFWSIIDPT
VLNKQGNDRGTQYRTGIFYLDQKDLNVIIKSKSQEQKNYRKPIVTEVEPLKCFYEAEEYHQKYLKKNPGGYCHIHLD

Sequences:

>Translated_157_residues
MKEIVLAGGCFWGVEEYMSRIKGIVETKVGYANGIKENPSYEEVCSGTTGHAEACYIKYDESIISLEELLNKFWSIIDPT
VLNKQGNDRGTQYRTGIFYLDQKDLNVIIKSKSQEQKNYRKPIVTEVEPLKCFYEAEEYHQKYLKKNPGGYCHIHLD
>Mature_157_residues
MKEIVLAGGCFWGVEEYMSRIKGIVETKVGYANGIKENPSYEEVCSGTTGHAEACYIKYDESIISLEELLNKFWSIIDPT
VLNKQGNDRGTQYRTGIFYLDQKDLNVIIKSKSQEQKNYRKPIVTEVEPLKCFYEAEEYHQKYLKKNPGGYCHIHLD

Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]

COG id: COG0225

COG function: function code O; Peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrA Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI6912516, Length=154, Percent_Identity=45.4545454545455, Blast_Score=142, Evalue=2e-34,
Organism=Homo sapiens, GI208609995, Length=154, Percent_Identity=45.4545454545455, Blast_Score=141, Evalue=3e-34,
Organism=Homo sapiens, GI208609993, Length=138, Percent_Identity=39.8550724637681, Blast_Score=99, Evalue=2e-21,
Organism=Escherichia coli, GI1790665, Length=153, Percent_Identity=44.4444444444444, Blast_Score=131, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17533973, Length=134, Percent_Identity=35.8208955223881, Blast_Score=82, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6320881, Length=163, Percent_Identity=47.239263803681, Blast_Score=137, Evalue=8e-34,
Organism=Drosophila melanogaster, GI24664627, Length=142, Percent_Identity=36.6197183098592, Blast_Score=84, Evalue=4e-17,
Organism=Drosophila melanogaster, GI45553131, Length=137, Percent_Identity=37.2262773722628, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24664631, Length=142, Percent_Identity=36.6197183098592, Blast_Score=80, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002569 [H]

Pfam domain/function: PF01625 PMSR [H]

EC number: =1.8.4.11 [H]

Molecular weight: Translated: 18102; Mature: 18102

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIVLAGGCFWGVEEYMSRIKGIVETKVGYANGIKENPSYEEVCSGTTGHAEACYIKYD
CCCEEEECCHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEC
ESIISLEELLNKFWSIIDPTVLNKQGNDRGTQYRTGIFYLDQKDLNVIIKSKSQEQKNYR
CHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCHHHHHHC
KPIVTEVEPLKCFYEAEEYHQKYLKKNPGGYCHIHLD
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC
>Mature Secondary Structure
MKEIVLAGGCFWGVEEYMSRIKGIVETKVGYANGIKENPSYEEVCSGTTGHAEACYIKYD
CCCEEEECCHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEC
ESIISLEELLNKFWSIIDPTVLNKQGNDRGTQYRTGIFYLDQKDLNVIIKSKSQEQKNYR
CHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCHHHHHHC
KPIVTEVEPLKCFYEAEEYHQKYLKKNPGGYCHIHLD
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA