Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is 170751253

Identifier: 170751253

GI number: 170751253

Start: 5201680

End: 5203041

Strand: Direct

Name: 170751253

Synonym: Mrad2831_4870

Alternate gene names: NA

Gene position: 5201680-5203041 (Clockwise)

Preceding gene: 170751252

Following gene: 170751256

Centisome position: 85.58

GC content: 74.01

Gene sequence:

>1362_bases
ATGTCCCTCTTCGCGAAGCTGCGGCGGCGCGCCGACGAGGGCCGGCCTGTCCGGGTCGGCCTGATCGGCGCCGGCAAATT
CGGCTCGATGTACCTGTCGCAGGCGCCGCGCACGCCCGGCATCCACCTCGTCGCGGTGGCCGACCTGTCGCCGGACCGGG
CGCGCGAAGCGCTGCGCCGGGTCGGCTGGGACGACGCCCGGTTCGCCGCGCGCGCGCTGGAGGCGGCCGCGCGCGGCGGC
ACGACCCTCGTGACCGAGGATGCCGAAGCGATGATCGCGAGCCCGTTCGTGGACATCGTCATCGACGCCACCGGCAGCCC
GGCCGCCGGCATCCGCCACGCGCTCCAGGCCTTCGCGGCGGCCAAGCACATCGTCATGGTCAATGTCGAGGCCGACGTGC
TGGCCGGGCCGCTGCTGGCGCGCCGGGCGGCGGAGGCCGGGGTGATCTACTCGATGGCCTCGGGCGACCAGCCGGCGCTC
ATCGCCGAGCTGGTCGACTGGGCCCGCACCATCGGGCTGGAGGTGATCTGCGCCGGGAAGGGCACCAAGTACCTCCCGGC
CTACCACGCCTCCACGCCCGACACGGTCTGGGGCCATTACGGCTTCAGCGAGAGCCAGGTCGCGGGCGGCGACTTCAACC
CGCAGATGTTCAACTCCTTCCTCGACGGCACCAAGTCGGCGCTGGAGATGGCCGCCGTGGCCAACGCCTGCGGGCTCACC
CCGCCGCGCGACGGCCTCGCCTTCCCGCCCTGCGGCGTCGACGACCTGCCGGGCATCCTCAAGCCGGCGGCCGACGGCGG
CCTCCTCACCGAGCGCGGCACCGTCGAGGTGGTCTCATCGGTGGAGCGGGACGGGCGGCCGGTCTTCCGGGACCTGCGCT
GGGGCGTCTACGCGGTGTTCGAGGCGCCGAGCCCCTACGTGCGCGACTGCTTCGCCCAGTACGGCCTCAAGACCGATTCG
AGCGGCCGGTTCGCCGCGACCTACAAGCCCTATCACCTGATCGGCCTCGAGCTCGGCATCTCGGTCGCCTCCATCGCGGT
CCGCGGCGAGGCGACGGGGGCGACGGGCGAGTGGCGCGGCGACGTCGCCGCCACGGCCAAGCGCGCGCTGCGGGCCGGCG
AGCGGCTCGACGGCGAGGGCGGGTTCACCGTCTACGGCAAGCTGATGCCGGCGGCCGAGTCCCTGGCGCAGGACGCCCTG
CCGATCGGGCTCGCCCACAACATGGTCCTCAAGACCGACGTGCCCGCGGGCCGGGCCGTGCGCTGGAGCGACGTCGCCTA
CGACGCCGGTCAAGAGGCGATCCGCGTCCGTCGCGAGATGGAGGACCTGTTCCGCGGGGCGACGGGGCGGCCCGCCGGGT
AG

Upstream 100 bases:

>100_bases
CCCTCAACGCCCTCGGGAACCGCACTAGGTCCCTGTCCAACAACGCGGCGAACGCGGCGGGGCTGGGTCCCGACCGCCCC
GCCCAGGGAGAGAACGCCCC

Downstream 100 bases:

>100_bases
AGCCGTTCCCGGCCGCGATGAGTCGGACGCGATTGCCGAGCCCTTGCCGCACGAGGCGCGGGTCCCCTCTCCCGTTGCGG
GAGAGGGGTTCGTGGCGCGG

Product: SAF domain-containing protein

Products: NA

Alternate protein names: SAF Domain Protein; Homoserine Dehydrogenase; NAD(P)-Dependent Oxidoreductase; Dihydrodipicolinate Reductase; Oxidoreductase; Oxidoreductase Domain Protein; Oxidoreductase Domain-Containing Protein; Oxidoreductase-Like; StrU Protein; Saf Domain Protein; SAF Domain Family Protein

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MSLFAKLRRRADEGRPVRVGLIGAGKFGSMYLSQAPRTPGIHLVAVADLSPDRAREALRRVGWDDARFAARALEAAARGG
TTLVTEDAEAMIASPFVDIVIDATGSPAAGIRHALQAFAAAKHIVMVNVEADVLAGPLLARRAAEAGVIYSMASGDQPAL
IAELVDWARTIGLEVICAGKGTKYLPAYHASTPDTVWGHYGFSESQVAGGDFNPQMFNSFLDGTKSALEMAAVANACGLT
PPRDGLAFPPCGVDDLPGILKPAADGGLLTERGTVEVVSSVERDGRPVFRDLRWGVYAVFEAPSPYVRDCFAQYGLKTDS
SGRFAATYKPYHLIGLELGISVASIAVRGEATGATGEWRGDVAATAKRALRAGERLDGEGGFTVYGKLMPAAESLAQDAL
PIGLAHNMVLKTDVPAGRAVRWSDVAYDAGQEAIRVRREMEDLFRGATGRPAG

Sequences:

>Translated_453_residues
MSLFAKLRRRADEGRPVRVGLIGAGKFGSMYLSQAPRTPGIHLVAVADLSPDRAREALRRVGWDDARFAARALEAAARGG
TTLVTEDAEAMIASPFVDIVIDATGSPAAGIRHALQAFAAAKHIVMVNVEADVLAGPLLARRAAEAGVIYSMASGDQPAL
IAELVDWARTIGLEVICAGKGTKYLPAYHASTPDTVWGHYGFSESQVAGGDFNPQMFNSFLDGTKSALEMAAVANACGLT
PPRDGLAFPPCGVDDLPGILKPAADGGLLTERGTVEVVSSVERDGRPVFRDLRWGVYAVFEAPSPYVRDCFAQYGLKTDS
SGRFAATYKPYHLIGLELGISVASIAVRGEATGATGEWRGDVAATAKRALRAGERLDGEGGFTVYGKLMPAAESLAQDAL
PIGLAHNMVLKTDVPAGRAVRWSDVAYDAGQEAIRVRREMEDLFRGATGRPAG
>Mature_452_residues
SLFAKLRRRADEGRPVRVGLIGAGKFGSMYLSQAPRTPGIHLVAVADLSPDRAREALRRVGWDDARFAARALEAAARGGT
TLVTEDAEAMIASPFVDIVIDATGSPAAGIRHALQAFAAAKHIVMVNVEADVLAGPLLARRAAEAGVIYSMASGDQPALI
AELVDWARTIGLEVICAGKGTKYLPAYHASTPDTVWGHYGFSESQVAGGDFNPQMFNSFLDGTKSALEMAAVANACGLTP
PRDGLAFPPCGVDDLPGILKPAADGGLLTERGTVEVVSSVERDGRPVFRDLRWGVYAVFEAPSPYVRDCFAQYGLKTDSS
GRFAATYKPYHLIGLELGISVASIAVRGEATGATGEWRGDVAATAKRALRAGERLDGEGGFTVYGKLMPAAESLAQDALP
IGLAHNMVLKTDVPAGRAVRWSDVAYDAGQEAIRVRREMEDLFRGATGRPAG

Specific function: Unknown

COG id: COG4091

COG function: function code E; Predicted homoserine dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47854; Mature: 47723

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFAKLRRRADEGRPVRVGLIGAGKFGSMYLSQAPRTPGIHLVAVADLSPDRAREALRR
CCHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHH
VGWDDARFAARALEAAARGGTTLVTEDAEAMIASPFVDIVIDATGSPAAGIRHALQAFAA
CCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHH
AKHIVMVNVEADVLAGPLLARRAAEAGVIYSMASGDQPALIAELVDWARTIGLEVICAGK
HCEEEEEEECHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCC
GTKYLPAYHASTPDTVWGHYGFSESQVAGGDFNPQMFNSFLDGTKSALEMAAVANACGLT
CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PPRDGLAFPPCGVDDLPGILKPAADGGLLTERGTVEVVSSVERDGRPVFRDLRWGVYAVF
CCCCCCCCCCCCCCCCCHHHCCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHCCCEEEEE
EAPSPYVRDCFAQYGLKTDSSGRFAATYKPYHLIGLELGISVASIAVRGEATGATGEWRG
ECCCHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEEECCCEEEEEEEECCCCCCCCCCCC
DVAATAKRALRAGERLDGEGGFTVYGKLMPAAESLAQDALPIGLAHNMVLKTDVPAGRAV
HHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCHHCCEEEEECCCCCCEE
RWSDVAYDAGQEAIRVRREMEDLFRGATGRPAG
EECHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SLFAKLRRRADEGRPVRVGLIGAGKFGSMYLSQAPRTPGIHLVAVADLSPDRAREALRR
CHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHH
VGWDDARFAARALEAAARGGTTLVTEDAEAMIASPFVDIVIDATGSPAAGIRHALQAFAA
CCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHH
AKHIVMVNVEADVLAGPLLARRAAEAGVIYSMASGDQPALIAELVDWARTIGLEVICAGK
HCEEEEEEECHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCC
GTKYLPAYHASTPDTVWGHYGFSESQVAGGDFNPQMFNSFLDGTKSALEMAAVANACGLT
CCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PPRDGLAFPPCGVDDLPGILKPAADGGLLTERGTVEVVSSVERDGRPVFRDLRWGVYAVF
CCCCCCCCCCCCCCCCCHHHCCCCCCCEECCCCHHHHHHHHHHCCCHHHHHHCCCEEEEE
EAPSPYVRDCFAQYGLKTDSSGRFAATYKPYHLIGLELGISVASIAVRGEATGATGEWRG
ECCCHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEEECCCEEEEEEEECCCCCCCCCCCC
DVAATAKRALRAGERLDGEGGFTVYGKLMPAAESLAQDALPIGLAHNMVLKTDVPAGRAV
HHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCHHCCEEEEECCCCCCEE
RWSDVAYDAGQEAIRVRREMEDLFRGATGRPAG
EECHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA