| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079209
Identifier: 170079209
GI number: 170079209
Start: 2744836
End: 2745918
Strand: Direct
Name: 170079209
Synonym: SYNPCC7002_A2615
Alternate gene names: NA
Gene position: 2744836-2745918 (Clockwise)
Preceding gene: 170079208
Following gene: 170079210
Centisome position: 91.25
GC content: 47.18
Gene sequence:
>1083_bases ATGAAAAATTATTTAAGGCTGACTTTTCTCAAACTAATAACCTTAGGATTGTGCTGTATTTCTCCTATGCAGTCTAGTCT TGCCCACAGTCCGACTAATTTGCAAAATGACCCGGCCTCTGCCAAAACATCTGGGCTTGAATTTCTCGTCGGCGAGTCAG ATCTAATCATTTTCGGCGAAGTTATTGACATTCAATATCGCAACTCCCAACCCACACGGGAACAACCCCAAGGATTACCC CATACTTTTGTAACTTACAAAATTCGTGAAACCTTACGGGGCAGAACGCCAGGGGAAACGATTACCTTGCGAGTGCCCGG TGGCGCCGATGGCAGTGGTGGCATCTACATGGAGACGACTGCACCGATATTTGCTCGCAACCAGGCAGATATTTTATTTC TAACCGGAGACGCCGTAATGGGATGTCCCTTGGTAAATTGCGTTGATGGCCGCTTTAGGGTCGTAGACAATCGTGTGTTT AATGGTTGGGGAATTCCCGTAGTTGAAGCGACAGAAAGACTAAGGATTGGGGGGAAACCCCGTTTTGATCTCAATGTGAT CGAATTACCAAGGCCTTCTTTTGAGCTGTTATTGAAACAACCAGAAACCCAAAGAATTATTCAGCAAGAAAGCCAGAGAA CGGGTCAAAGCATTGCCGAGCTACAACGACGCTACGAAACAGAAGCACCTGCTGCTTATCGGGTGGGTTATGGTTTTCAG GCGGCAGTGACAGCTGGTGATAATTTCGATTCTCCTGAAGCAGTTCCCATAGAAACCTTTGGACCGCCCCTCAGTTTGTC TGCGTTTTTTGAAGCTGTACGCCAGTGGAACAACCGGGTACAACCCCCCCAGTCTTCAATCCCATCGGCTGATCCGAACA AACCATTCAATGTGGCGGATCCAAGGTTAGAAGAAGTCAGAGCTGTCACAGTTCCGGATCAGATTACCGAAGAAGAAAAG AATGATGTTCAGGCCCAGGAAGGAGAAGGACAAATTCGTGATCTTTCGCCTAATTTGAGAGACCTTTCACCGCAACCCAT TTCACCTGAGCTAAGACCCGACTTAAGACGGATAAACCCCTAA
Upstream 100 bases:
>100_bases GAAAATTTTAATGTATTAAATCCAAGTAAGCAATGACTTTTTGATTGATTTCAAAATCTGATTCTACGCCATTAAATTTA TTGGAGGTCTGTTGAAATAC
Downstream 100 bases:
>100_bases TTTAACCAGAATCACAACCAATTATTACAGGGACTTTTGCTATGAAGTTCAACTTGTTTAATCCCTATCTACTTGCGGCC TCAGCCATTATCTCTGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKNYLRLTFLKLITLGLCCISPMQSSLAHSPTNLQNDPASAKTSGLEFLVGESDLIIFGEVIDIQYRNSQPTREQPQGLP HTFVTYKIRETLRGRTPGETITLRVPGGADGSGGIYMETTAPIFARNQADILFLTGDAVMGCPLVNCVDGRFRVVDNRVF NGWGIPVVEATERLRIGGKPRFDLNVIELPRPSFELLLKQPETQRIIQQESQRTGQSIAELQRRYETEAPAAYRVGYGFQ AAVTAGDNFDSPEAVPIETFGPPLSLSAFFEAVRQWNNRVQPPQSSIPSADPNKPFNVADPRLEEVRAVTVPDQITEEEK NDVQAQEGEGQIRDLSPNLRDLSPQPISPELRPDLRRINP
Sequences:
>Translated_360_residues MKNYLRLTFLKLITLGLCCISPMQSSLAHSPTNLQNDPASAKTSGLEFLVGESDLIIFGEVIDIQYRNSQPTREQPQGLP HTFVTYKIRETLRGRTPGETITLRVPGGADGSGGIYMETTAPIFARNQADILFLTGDAVMGCPLVNCVDGRFRVVDNRVF NGWGIPVVEATERLRIGGKPRFDLNVIELPRPSFELLLKQPETQRIIQQESQRTGQSIAELQRRYETEAPAAYRVGYGFQ AAVTAGDNFDSPEAVPIETFGPPLSLSAFFEAVRQWNNRVQPPQSSIPSADPNKPFNVADPRLEEVRAVTVPDQITEEEK NDVQAQEGEGQIRDLSPNLRDLSPQPISPELRPDLRRINP >Mature_360_residues MKNYLRLTFLKLITLGLCCISPMQSSLAHSPTNLQNDPASAKTSGLEFLVGESDLIIFGEVIDIQYRNSQPTREQPQGLP HTFVTYKIRETLRGRTPGETITLRVPGGADGSGGIYMETTAPIFARNQADILFLTGDAVMGCPLVNCVDGRFRVVDNRVF NGWGIPVVEATERLRIGGKPRFDLNVIELPRPSFELLLKQPETQRIIQQESQRTGQSIAELQRRYETEAPAAYRVGYGFQ AAVTAGDNFDSPEAVPIETFGPPLSLSAFFEAVRQWNNRVQPPQSSIPSADPNKPFNVADPRLEEVRAVTVPDQITEEEK NDVQAQEGEGQIRDLSPNLRDLSPQPISPELRPDLRRINP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39979; Mature: 39979
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNYLRLTFLKLITLGLCCISPMQSSLAHSPTNLQNDPASAKTSGLEFLVGESDLIIFGE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEE VIDIQYRNSQPTREQPQGLPHTFVTYKIRETLRGRTPGETITLRVPGGADGSGGIYMETT EEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEC APIFARNQADILFLTGDAVMGCPLVNCVDGRFRVVDNRVFNGWGIPVVEATERLRIGGKP CCEEECCCCCEEEEECCCCCCCCCEEECCCEEEEEECEEECCCCCCHHHHHHHHCCCCCC RFDLNVIELPRPSFELLLKQPETQRIIQQESQRTGQSIAELQRRYETEAPAAYRVGYGFQ CCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEE AAVTAGDNFDSPEAVPIETFGPPLSLSAFFEAVRQWNNRVQPPQSSIPSADPNKPFNVAD EEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PRLEEVRAVTVPDQITEEEKNDVQAQEGEGQIRDLSPNLRDLSPQPISPELRPDLRRINP CCHHHEEEEECCHHHHHHHHHCCCCCCCCCCEEECCCCHHCCCCCCCCCCCCCHHHCCCC >Mature Secondary Structure MKNYLRLTFLKLITLGLCCISPMQSSLAHSPTNLQNDPASAKTSGLEFLVGESDLIIFGE CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEE VIDIQYRNSQPTREQPQGLPHTFVTYKIRETLRGRTPGETITLRVPGGADGSGGIYMETT EEEEEECCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCEEEEECCCCCCCCCCEEEEEC APIFARNQADILFLTGDAVMGCPLVNCVDGRFRVVDNRVFNGWGIPVVEATERLRIGGKP CCEEECCCCCEEEEECCCCCCCCCEEECCCEEEEEECEEECCCCCCHHHHHHHHCCCCCC RFDLNVIELPRPSFELLLKQPETQRIIQQESQRTGQSIAELQRRYETEAPAAYRVGYGFQ CCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEE AAVTAGDNFDSPEAVPIETFGPPLSLSAFFEAVRQWNNRVQPPQSSIPSADPNKPFNVAD EEEECCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PRLEEVRAVTVPDQITEEEKNDVQAQEGEGQIRDLSPNLRDLSPQPISPELRPDLRRINP CCHHHEEEEECCHHHHHHHHHCCCCCCCCCCEEECCCCHHCCCCCCCCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA