Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170079138

Identifier: 170079138

GI number: 170079138

Start: 2650090

End: 2650479

Strand: Direct

Name: 170079138

Synonym: SYNPCC7002_A2544

Alternate gene names: NA

Gene position: 2650090-2650479 (Clockwise)

Preceding gene: 170079137

Following gene: 170079141

Centisome position: 88.1

GC content: 42.56

Gene sequence:

>390_bases
ATGGAAGAATATTATTACTATTACATTCCCCAGCCGCCGTTTTTGTTGGTAGGCCTTGGCTTGTTTATTGCCCTAACTAG
CGGCTTTGCGTTCCAGAGTACCCTGAAGCTCAAAGCACGGGGGATTGTTGCCAATAACGACGATATTCACAAACAGTTAT
CCACCATTGATTTACAACTGCCTCTCTTTGGCATTGGTATGGGCATGAGTATTTTTCTCGCCAGTGGTTTAGAAGTCTTT
TTTATCCCCGCTTGGTTTGCCTACAGCTTGTCTTTACCTTTAACTATCGGCACTGTGGGTCTTTTATGGAAACAATTGGA
GCGAGTCTTTGCCATTCTCCGGGAAGGTGGATCAAAAGCCTTAGAAGTTGATTCTTTCAATATTTTTTAA

Upstream 100 bases:

>100_bases
TCCGCCAATTTTCCGGTGAGCGTTTAACGGCTGTTTTGCCGAGTTTCGCCCAATCTCGGTCATAATGAAGGCTAGTTAAT
AAAGTTTTGTTAAAAAATCC

Downstream 100 bases:

>100_bases
GGCCAATTTAGCCGCCCAACACAACCGAATTATCGCGCAATCGCCTCCTTTAGTCCGGGAAAAAATGCACCAGGTTAAAT
CCTGAGGCCCGTCCCAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MEEYYYYYIPQPPFLLVGLGLFIALTSGFAFQSTLKLKARGIVANNDDIHKQLSTIDLQLPLFGIGMGMSIFLASGLEVF
FIPAWFAYSLSLPLTIGTVGLLWKQLERVFAILREGGSKALEVDSFNIF

Sequences:

>Translated_129_residues
MEEYYYYYIPQPPFLLVGLGLFIALTSGFAFQSTLKLKARGIVANNDDIHKQLSTIDLQLPLFGIGMGMSIFLASGLEVF
FIPAWFAYSLSLPLTIGTVGLLWKQLERVFAILREGGSKALEVDSFNIF
>Mature_129_residues
MEEYYYYYIPQPPFLLVGLGLFIALTSGFAFQSTLKLKARGIVANNDDIHKQLSTIDLQLPLFGIGMGMSIFLASGLEVF
FIPAWFAYSLSLPLTIGTVGLLWKQLERVFAILREGGSKALEVDSFNIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14406; Mature: 14406

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEYYYYYIPQPPFLLVGLGLFIALTSGFAFQSTLKLKARGIVANNDDIHKQLSTIDLQL
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHEEEEEEEEEEECCHHHHHHHHHEEEEC
PLFGIGMGMSIFLASGLEVFFIPAWFAYSLSLPLTIGTVGLLWKQLERVFAILREGGSKA
CCEECCCHHHHHHHCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
LEVDSFNIF
EEECCEECC
>Mature Secondary Structure
MEEYYYYYIPQPPFLLVGLGLFIALTSGFAFQSTLKLKARGIVANNDDIHKQLSTIDLQL
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHEEEEEEEEEEECCHHHHHHHHHEEEEC
PLFGIGMGMSIFLASGLEVFFIPAWFAYSLSLPLTIGTVGLLWKQLERVFAILREGGSKA
CCEECCCHHHHHHHCCCEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
LEVDSFNIF
EEECCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA