| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078817
Identifier: 170078817
GI number: 170078817
Start: 2307835
End: 2308287
Strand: Reverse
Name: 170078817
Synonym: SYNPCC7002_A2219
Alternate gene names: NA
Gene position: 2308287-2307835 (Counterclockwise)
Preceding gene: 170078819
Following gene: 170078816
Centisome position: 76.74
GC content: 52.98
Gene sequence:
>453_bases ATGTGTCCCGTCGATTTGGCCCGCACCATCGAGGAGGATGCCCACCAATTTGTTGTGGGTCGGGGCATTTTACAGAATTA TCGTCTGGCGTTTAATCGTCTTTCTCCTAAACGCAAAAGCTGTGGTGTTTTGGATGTGGTGCCCCACGCAGGCAGTCATG TGGAAGGCGTTCTCTACCATTTGCCCTGGCGAGTCAGTGAAAAGCTCGATCTGCGGGAGGAAGTCCCCACCAATGGTTAT CGCCAAACCCAGGTGACTGTTGAATGCCAAGGCCAGCGGTTCCCCTCGGTGCGTACCTACGTCGTCGTCAATAAAACGCC CCAGGAAGTTCCCCCAGACGATTGGTATTTTTATATTGTGATGCGGGGGGCAATGACCGCTGGCCTTTCCCGCGACTATT CTTGGCGATTGTTTAACCACATGAAACGTCTCCAACGGGGTCAGACCCTTTAA
Upstream 100 bases:
>100_bases TGACCCTTCTGCGCCCCCTTTCCAAACCCACACAGCGTCCCAACCCCGCACCATCACCCACACAGACAGGGCTTTCTATT ATTTCGCCTATGGGTCTTGT
Downstream 100 bases:
>100_bases AATTTTTGATGCTGTGTGCTTAGGAAGAAGGATTGATATTTTATGGTTGCCCCTAAACAAGAAGAACTCCCCACAACGGC GATCGCCCGTTCCCCGGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MCPVDLARTIEEDAHQFVVGRGILQNYRLAFNRLSPKRKSCGVLDVVPHAGSHVEGVLYHLPWRVSEKLDLREEVPTNGY RQTQVTVECQGQRFPSVRTYVVVNKTPQEVPPDDWYFYIVMRGAMTAGLSRDYSWRLFNHMKRLQRGQTL
Sequences:
>Translated_150_residues MCPVDLARTIEEDAHQFVVGRGILQNYRLAFNRLSPKRKSCGVLDVVPHAGSHVEGVLYHLPWRVSEKLDLREEVPTNGY RQTQVTVECQGQRFPSVRTYVVVNKTPQEVPPDDWYFYIVMRGAMTAGLSRDYSWRLFNHMKRLQRGQTL >Mature_150_residues MCPVDLARTIEEDAHQFVVGRGILQNYRLAFNRLSPKRKSCGVLDVVPHAGSHVEGVLYHLPWRVSEKLDLREEVPTNGY RQTQVTVECQGQRFPSVRTYVVVNKTPQEVPPDDWYFYIVMRGAMTAGLSRDYSWRLFNHMKRLQRGQTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17405; Mature: 17405
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCPVDLARTIEEDAHQFVVGRGILQNYRLAFNRLSPKRKSCGVLDVVPHAGSHVEGVLYH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEE LPWRVSEKLDLREEVPTNGYRQTQVTVECQGQRFPSVRTYVVVNKTPQEVPPDDWYFYIV CCCCCCCCCCCHHCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEE MRGAMTAGLSRDYSWRLFNHMKRLQRGQTL EECHHHHCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MCPVDLARTIEEDAHQFVVGRGILQNYRLAFNRLSPKRKSCGVLDVVPHAGSHVEGVLYH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEE LPWRVSEKLDLREEVPTNGYRQTQVTVECQGQRFPSVRTYVVVNKTPQEVPPDDWYFYIV CCCCCCCCCCCHHCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCEEEEEE MRGAMTAGLSRDYSWRLFNHMKRLQRGQTL EECHHHHCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA