Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078660

Identifier: 170078660

GI number: 170078660

Start: 2140394

End: 2141332

Strand: Direct

Name: 170078660

Synonym: SYNPCC7002_A2056

Alternate gene names: NA

Gene position: 2140394-2141332 (Clockwise)

Preceding gene: 170078657

Following gene: 170078673

Centisome position: 71.16

GC content: 52.5

Gene sequence:

>939_bases
GTGCCGTTCTATCAAAGTTGCGATCGCCTCACGGAACTAGGACAGCAAATTTTACAGACGACCTGGCGCAAATTTCCCAG
CCTGAGTCCCGAACAAATCGCCCTAACGTGGTTGGTCTATGACAATCCGGTGGTGGTCAATACCGATGGTGCCCTTTCGC
CAGAAGCTTTTTGGGAGCACCCAGTCCGGGGGTTTCAATATCGGGGTGATGTGCGCCTTTATCCGGCGAGTGTGGTGAAA
CTTTTTTATTTAGTAGCGATCCACGAATGGCTAGAGGGACGAATGCTCCAGAACAGCACCGAGCTAGAACGGGCAATCCA
GGACATGATTGTTGAGTCGAGTAACGACGCCACGAGCTACATTGTCGATAGTCTCACCGGAACCACCAGCGGCCCGGAAC
TCCCCCCAGAACCCCTGCAAACCTGGAGCCACCAGCGCAACATTATCAATCGCTATTATCAGTCCCTCGGTTGGGCGGAA
CTCGCGCCGATCAATGTCAATCAAAAACCTTGGAGTAATGGCCCCTATGGTCGGGAGCGGCAGTTTTTGGGGGCAAACTA
TGAAAATCGAAATATGCTCACCACCAATGCAATCGTCCGGTTATTTCACAGCATTATGGGCGGCGTTGCCGTCTCCCGTG
AACGGTGCCAAAGCATGATTCATTTATTGAACCGCTCCCTTGATCCGGCGGATCTGCAGGAATTTGACGAGGAAAATCAA
GTAACTGGCTTTTTGGGGGAAGTGCTCCCAGACGGTAGTCAACTGTGGTCGAAGGCGGGTTGGACGAGCCGCGCCCGCCA
TGATGCTGCCTACATCGAAGTGCCGGGGCAGCAACCTTATTTATTGGTTGTGTTCACAGAAGGGGAAGCCAATGCGAAAA
ATCGCGCCATTCTCCCTTTTATTTCCCAGGAAATCCTGGGGGCGATCGCCAATATTTAA

Upstream 100 bases:

>100_bases
AAAATTTAAGACCGTTTGCCAGGGTTCCGCCATCGATAACCGTGCCTCCCACTGAAAATATGCCAGAATCTTACCATTAA
TGTAAGCAAGGAGAGAGGGT

Downstream 100 bases:

>100_bases
CGCACTTGAATGGTTGTCTCAAGGGAGACGGTGCCTGAAAGGGAATTCGTAATCAAACAATTGGCTTCTGCTTTATGGAG
GAGGCGATCGCCTTTGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MPFYQSCDRLTELGQQILQTTWRKFPSLSPEQIALTWLVYDNPVVVNTDGALSPEAFWEHPVRGFQYRGDVRLYPASVVK
LFYLVAIHEWLEGRMLQNSTELERAIQDMIVESSNDATSYIVDSLTGTTSGPELPPEPLQTWSHQRNIINRYYQSLGWAE
LAPINVNQKPWSNGPYGRERQFLGANYENRNMLTTNAIVRLFHSIMGGVAVSRERCQSMIHLLNRSLDPADLQEFDEENQ
VTGFLGEVLPDGSQLWSKAGWTSRARHDAAYIEVPGQQPYLLVVFTEGEANAKNRAILPFISQEILGAIANI

Sequences:

>Translated_312_residues
MPFYQSCDRLTELGQQILQTTWRKFPSLSPEQIALTWLVYDNPVVVNTDGALSPEAFWEHPVRGFQYRGDVRLYPASVVK
LFYLVAIHEWLEGRMLQNSTELERAIQDMIVESSNDATSYIVDSLTGTTSGPELPPEPLQTWSHQRNIINRYYQSLGWAE
LAPINVNQKPWSNGPYGRERQFLGANYENRNMLTTNAIVRLFHSIMGGVAVSRERCQSMIHLLNRSLDPADLQEFDEENQ
VTGFLGEVLPDGSQLWSKAGWTSRARHDAAYIEVPGQQPYLLVVFTEGEANAKNRAILPFISQEILGAIANI
>Mature_311_residues
PFYQSCDRLTELGQQILQTTWRKFPSLSPEQIALTWLVYDNPVVVNTDGALSPEAFWEHPVRGFQYRGDVRLYPASVVKL
FYLVAIHEWLEGRMLQNSTELERAIQDMIVESSNDATSYIVDSLTGTTSGPELPPEPLQTWSHQRNIINRYYQSLGWAEL
APINVNQKPWSNGPYGRERQFLGANYENRNMLTTNAIVRLFHSIMGGVAVSRERCQSMIHLLNRSLDPADLQEFDEENQV
TGFLGEVLPDGSQLWSKAGWTSRARHDAAYIEVPGQQPYLLVVFTEGEANAKNRAILPFISQEILGAIANI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35387; Mature: 35256

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFYQSCDRLTELGQQILQTTWRKFPSLSPEQIALTWLVYDNPVVVNTDGALSPEAFWEH
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEECCCCCCHHHHHHC
PVRGFQYRGDVRLYPASVVKLFYLVAIHEWLEGRMLQNSTELERAIQDMIVESSNDATSY
CCCCCEECCCEEECHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCCCHHHH
IVDSLTGTTSGPELPPEPLQTWSHQRNIINRYYQSLGWAELAPINVNQKPWSNGPYGRER
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
QFLGANYENRNMLTTNAIVRLFHSIMGGVAVSRERCQSMIHLLNRSLDPADLQEFDEENQ
HHCCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCH
VTGFLGEVLPDGSQLWSKAGWTSRARHDAAYIEVPGQQPYLLVVFTEGEANAKNRAILPF
HHHHHHHHCCCHHHHHHHCCCCCHHHCCCEEEECCCCCCEEEEEEECCCCCCCCCEEHHH
ISQEILGAIANI
HHHHHHHHHHCC
>Mature Secondary Structure 
PFYQSCDRLTELGQQILQTTWRKFPSLSPEQIALTWLVYDNPVVVNTDGALSPEAFWEH
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEECCCCCCHHHHHHC
PVRGFQYRGDVRLYPASVVKLFYLVAIHEWLEGRMLQNSTELERAIQDMIVESSNDATSY
CCCCCEECCCEEECHHHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHHHHCCCCCHHHH
IVDSLTGTTSGPELPPEPLQTWSHQRNIINRYYQSLGWAELAPINVNQKPWSNGPYGRER
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
QFLGANYENRNMLTTNAIVRLFHSIMGGVAVSRERCQSMIHLLNRSLDPADLQEFDEENQ
HHCCCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCH
VTGFLGEVLPDGSQLWSKAGWTSRARHDAAYIEVPGQQPYLLVVFTEGEANAKNRAILPF
HHHHHHHHCCCHHHHHHHCCCCCHHHCCCEEEECCCCCCEEEEEEECCCCCCCCCEEHHH
ISQEILGAIANI
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA