Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078472

Identifier: 170078472

GI number: 170078472

Start: 1958435

End: 1959937

Strand: Reverse

Name: 170078472

Synonym: SYNPCC7002_A1866

Alternate gene names: NA

Gene position: 1959937-1958435 (Counterclockwise)

Preceding gene: 170078473

Following gene: 170078466

Centisome position: 65.16

GC content: 50.23

Gene sequence:

>1503_bases
ATGGCTTTTGAGCTGGACATCGGCGATCTGATTAGCCGCCAAATTAGGGTAGAGGTCGCCCCAGAAGGCCGAGAGATTGG
TGATCTTCTTGATGTTTTCGAGGATGACAGCGGGGGCTTCCTTGGGAGAATCTTCTCGTTTACCAAGCAATTAATCGGGT
TTGCTTTAAAGGCAATCCCGGTAATTAGATTTCCTTTTTCTTCTCTGTTTGGCTGGGCTGTCCAAGCTTTTAACTTTATT
CGCTTCTTTGATTGGAATGCCTCAGACGCCGAATTACAAGCCGGAATCAAACAGCGCAATTTAGCGGTGGCTGATGCCTG
GGGCGCTTTCTTTGGGCAATTAGCCGGGACGCTGGTCGTGGGAGGCTTGGGGGCACTGGGGGCGCTATATATTCCCGCCA
TTGGGGGCAAAATGTTGGCAATCTCAACCCTCGTCAAGCTGTTTAAAGAACGGGGGGATGAAGTTTTCGAGGAATTGCGC
TTTGCTGTTCGACAATCAGCAGTCGTCTTTGGAGAGAAAAAATTTATTCAAGCCTATATTCGTATCCGTCGCCTAATCAA
AAATCGTTTCCCTCAGTTAAAGAACTGGGGCGCTGACGATGGCGATCGCTGGACATTTGCTGAGAAATTTGAAGAGAAAA
TCGACAGCATCGAAAATGATGGCCTCCGGACATTTTTAGAATCCTTCTTTGATGAATTTGAGGAAGCCTTTATCGAAGGG
GGCTATGTGATTGCGGGCTATTGGGACAACCTTATGGCCCAAACCAATGAGAATCGCCTAGAAATCCTAGGGGAAGACAA
GGCCGGAACCATTCAGCTCAGGGCTGGGGGAGAAGATACGCCATTCTTGCGTTACATCCAGCTCCCCTCTAATTTGGCGA
TCTCCGGTCTCCAGCACCAAATGAATACCTACCGGTCTTTCCAAGGATTAAGAATTGGGGAGTATGGTGGAGAGCCGACC
GAGCCGGATAATACCCTACGCCCCTACCTCCGCACCGCCAAAATTATCATGCGGTCTGGGAGTGAAAAGCCACCATTCAC
GAATCCCGACGGCACCATTAGCAGCCGCCATCAGATCACCCTGAAATCCCTAAAGCCAGATTTACGTTGGCGAGATTTTA
AGCGGGTGTTCCGTCGCCACACCTGGGGGCCATGGAAAATCGAAGTAGTCCTCCAGAGCCGCGCCTCGATTTGGCTCTAT
GCTGACAGTCGAGAAAATGGGGTGCTATTTGCGCGGGAAATTGTGGACGAGCTGATCGAGGAAGATGCAATTCGGATCGC
CGCCACGATTGAGGAAGTTGACCCAAGGGTGACCCAACGGCCCAAAGTAATTTATCCCCAGGAGGTCTATATCACCCTCA
AGCGGGCGATCGCCTCTGGGAGGATTATAGATTTGTCGGGGAAACGCTGGGAGCAACAAAAGTTTACTTATGATCTGTGG
CCGGACGATGAGCCATTCGGGACGCCACAATTTATTACAAATTTTCCGGTCGATCCGACCTAA

Upstream 100 bases:

>100_bases
ATAAATTCCAGGAAATTGTCAACAATCCCGATTCTGAATACAACATCGATCAAGACGTGAAATTCAAAATTACTGACCGC
GATGTGGAGATTGATGAATA

Downstream 100 bases:

>100_bases
TCAAAAGGTGATTTTAGGCAAAATTTAGGCAAGAATTAAAAAGAAGTCCTCAAATCCTTTCCTAGTGGCCTTTCTGGAAT
AACAATGGGTGTCTGCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 499

Protein sequence:

>500_residues
MAFELDIGDLISRQIRVEVAPEGREIGDLLDVFEDDSGGFLGRIFSFTKQLIGFALKAIPVIRFPFSSLFGWAVQAFNFI
RFFDWNASDAELQAGIKQRNLAVADAWGAFFGQLAGTLVVGGLGALGALYIPAIGGKMLAISTLVKLFKERGDEVFEELR
FAVRQSAVVFGEKKFIQAYIRIRRLIKNRFPQLKNWGADDGDRWTFAEKFEEKIDSIENDGLRTFLESFFDEFEEAFIEG
GYVIAGYWDNLMAQTNENRLEILGEDKAGTIQLRAGGEDTPFLRYIQLPSNLAISGLQHQMNTYRSFQGLRIGEYGGEPT
EPDNTLRPYLRTAKIIMRSGSEKPPFTNPDGTISSRHQITLKSLKPDLRWRDFKRVFRRHTWGPWKIEVVLQSRASIWLY
ADSRENGVLFAREIVDELIEEDAIRIAATIEEVDPRVTQRPKVIYPQEVYITLKRAIASGRIIDLSGKRWEQQKFTYDLW
PDDEPFGTPQFITNFPVDPT

Sequences:

>Translated_500_residues
MAFELDIGDLISRQIRVEVAPEGREIGDLLDVFEDDSGGFLGRIFSFTKQLIGFALKAIPVIRFPFSSLFGWAVQAFNFI
RFFDWNASDAELQAGIKQRNLAVADAWGAFFGQLAGTLVVGGLGALGALYIPAIGGKMLAISTLVKLFKERGDEVFEELR
FAVRQSAVVFGEKKFIQAYIRIRRLIKNRFPQLKNWGADDGDRWTFAEKFEEKIDSIENDGLRTFLESFFDEFEEAFIEG
GYVIAGYWDNLMAQTNENRLEILGEDKAGTIQLRAGGEDTPFLRYIQLPSNLAISGLQHQMNTYRSFQGLRIGEYGGEPT
EPDNTLRPYLRTAKIIMRSGSEKPPFTNPDGTISSRHQITLKSLKPDLRWRDFKRVFRRHTWGPWKIEVVLQSRASIWLY
ADSRENGVLFAREIVDELIEEDAIRIAATIEEVDPRVTQRPKVIYPQEVYITLKRAIASGRIIDLSGKRWEQQKFTYDLW
PDDEPFGTPQFITNFPVDPT
>Mature_499_residues
AFELDIGDLISRQIRVEVAPEGREIGDLLDVFEDDSGGFLGRIFSFTKQLIGFALKAIPVIRFPFSSLFGWAVQAFNFIR
FFDWNASDAELQAGIKQRNLAVADAWGAFFGQLAGTLVVGGLGALGALYIPAIGGKMLAISTLVKLFKERGDEVFEELRF
AVRQSAVVFGEKKFIQAYIRIRRLIKNRFPQLKNWGADDGDRWTFAEKFEEKIDSIENDGLRTFLESFFDEFEEAFIEGG
YVIAGYWDNLMAQTNENRLEILGEDKAGTIQLRAGGEDTPFLRYIQLPSNLAISGLQHQMNTYRSFQGLRIGEYGGEPTE
PDNTLRPYLRTAKIIMRSGSEKPPFTNPDGTISSRHQITLKSLKPDLRWRDFKRVFRRHTWGPWKIEVVLQSRASIWLYA
DSRENGVLFAREIVDELIEEDAIRIAATIEEVDPRVTQRPKVIYPQEVYITLKRAIASGRIIDLSGKRWEQQKFTYDLWP
DDEPFGTPQFITNFPVDPT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57043; Mature: 56911

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFELDIGDLISRQIRVEVAPEGREIGDLLDVFEDDSGGFLGRIFSFTKQLIGFALKAIP
CEEECCHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VIRFPFSSLFGWAVQAFNFIRFFDWNASDAELQAGIKQRNLAVADAWGAFFGQLAGTLVV
HHCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHCHHHCCEEEHHHHHHHHHHHHHHHHH
GGLGALGALYIPAIGGKMLAISTLVKLFKERGDEVFEELRFAVRQSAVVFGEKKFIQAYI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIRRLIKNRFPQLKNWGADDGDRWTFAEKFEEKIDSIENDGLRTFLESFFDEFEEAFIEG
HHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
GYVIAGYWDNLMAQTNENRLEILGEDKAGTIQLRAGGEDTPFLRYIQLPSNLAISGLQHQ
CEEEEEEHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHH
MNTYRSFQGLRIGEYGGEPTEPDNTLRPYLRTAKIIMRSGSEKPPFTNPDGTISSRHQIT
HHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
LKSLKPDLRWRDFKRVFRRHTWGPWKIEVVLQSRASIWLYADSRENGVLFAREIVDELIE
HHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCEEEHHHHHHHHHH
EDAIRIAATIEEVDPRVTQRPKVIYPQEVYITLKRAIASGRIIDLSGKRWEQQKFTYDLW
HHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEECC
PDDEPFGTPQFITNFPVDPT
CCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure 
AFELDIGDLISRQIRVEVAPEGREIGDLLDVFEDDSGGFLGRIFSFTKQLIGFALKAIP
EEECCHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
VIRFPFSSLFGWAVQAFNFIRFFDWNASDAELQAGIKQRNLAVADAWGAFFGQLAGTLVV
HHCCCHHHHHHHHHHHHHHHHEECCCCCCHHHHHCHHHCCEEEHHHHHHHHHHHHHHHHH
GGLGALGALYIPAIGGKMLAISTLVKLFKERGDEVFEELRFAVRQSAVVFGEKKFIQAYI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIRRLIKNRFPQLKNWGADDGDRWTFAEKFEEKIDSIENDGLRTFLESFFDEFEEAFIEG
HHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
GYVIAGYWDNLMAQTNENRLEILGEDKAGTIQLRAGGEDTPFLRYIQLPSNLAISGLQHQ
CEEEEEEHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHH
MNTYRSFQGLRIGEYGGEPTEPDNTLRPYLRTAKIIMRSGSEKPPFTNPDGTISSRHQIT
HHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEE
LKSLKPDLRWRDFKRVFRRHTWGPWKIEVVLQSRASIWLYADSRENGVLFAREIVDELIE
HHHCCCCCCHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEECCCCCCEEEHHHHHHHHHH
EDAIRIAATIEEVDPRVTQRPKVIYPQEVYITLKRAIASGRIIDLSGKRWEQQKFTYDLW
HHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCCEEECC
PDDEPFGTPQFITNFPVDPT
CCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA