Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078426

Identifier: 170078426

GI number: 170078426

Start: 1907330

End: 1907812

Strand: Direct

Name: 170078426

Synonym: SYNPCC7002_A1820

Alternate gene names: NA

Gene position: 1907330-1907812 (Clockwise)

Preceding gene: 170078425

Following gene: 170078428

Centisome position: 63.41

GC content: 54.24

Gene sequence:

>483_bases
ATGGCGCAAAATTTACCCGCTCCCCCCCAACCTTTGCCCGATAAACTTTGGGGTGAAAATTGGCGTTTTGGCAGTATCCC
TGCTGGAGATTTTTGGGATTTGTTTGGCGATCGCCCGATCCCGATTTTGTCGCTGCCGGAGGAGTTGCAGCCGGTGAAAT
TAGGGCTAGCTTCTAATGTGCTGATTCCGGGGACGATTATTTATGGTGGCAGGCAGTCGATGCAGTTGGCCCAGTGGCTC
CAAGAACAGCAACCCCAAACGGTTTTTTACCAGGAAACGGAGGCCAACCTCGCGGGCGGATTTGTCCTTACCGGGGCCGA
TACCCAACGGTGGGTGATCATGACTTTCCATGACCAGGCGATCGCCAGCGCCGGACAACGTTACCAACAACGGCTCCAGC
AAGCCCAAGGTTTACATTTCCTTTTAGTGCAACCCGACGATTCCGATGTGACCCACACGGCCCTTTGGCTCCTGAAAGCT
TAG

Upstream 100 bases:

>100_bases
GACCCCCAGGTGAAACTCAGTGAGGGCCTGCAGCGAGAATGGGACTGGATTCAAAGTCTGTATTAGTTTGTATGAAAACA
ATCCCTGAGGCGAATTGATT

Downstream 100 bases:

>100_bases
TCGTTGACGCAAATTAGCCCAGATGAATTAGTCCAAATCAAAATCCCAATAAAAAGCGATCGCCACCTGAGAGGAATAGG
AGAAGGGCGATCGCCGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MAQNLPAPPQPLPDKLWGENWRFGSIPAGDFWDLFGDRPIPILSLPEELQPVKLGLASNVLIPGTIIYGGRQSMQLAQWL
QEQQPQTVFYQETEANLAGGFVLTGADTQRWVIMTFHDQAIASAGQRYQQRLQQAQGLHFLLVQPDDSDVTHTALWLLKA

Sequences:

>Translated_160_residues
MAQNLPAPPQPLPDKLWGENWRFGSIPAGDFWDLFGDRPIPILSLPEELQPVKLGLASNVLIPGTIIYGGRQSMQLAQWL
QEQQPQTVFYQETEANLAGGFVLTGADTQRWVIMTFHDQAIASAGQRYQQRLQQAQGLHFLLVQPDDSDVTHTALWLLKA
>Mature_159_residues
AQNLPAPPQPLPDKLWGENWRFGSIPAGDFWDLFGDRPIPILSLPEELQPVKLGLASNVLIPGTIIYGGRQSMQLAQWLQ
EQQPQTVFYQETEANLAGGFVLTGADTQRWVIMTFHDQAIASAGQRYQQRLQQAQGLHFLLVQPDDSDVTHTALWLLKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17918; Mature: 17786

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQNLPAPPQPLPDKLWGENWRFGSIPAGDFWDLFGDRPIPILSLPEELQPVKLGLASNV
CCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCEEECCCCCE
LIPGTIIYGGRQSMQLAQWLQEQQPQTVFYQETEANLAGGFVLTGADTQRWVIMTFHDQA
ECCCEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCEEEEEEECCHH
IASAGQRYQQRLQQAQGLHFLLVQPDDSDVTHTALWLLKA
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEECC
>Mature Secondary Structure 
AQNLPAPPQPLPDKLWGENWRFGSIPAGDFWDLFGDRPIPILSLPEELQPVKLGLASNV
CCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCCEEECCCCCE
LIPGTIIYGGRQSMQLAQWLQEQQPQTVFYQETEANLAGGFVLTGADTQRWVIMTFHDQA
ECCCEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCEEEEEEECCHH
IASAGQRYQQRLQQAQGLHFLLVQPDDSDVTHTALWLLKA
HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA