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The map label for this gene is cpcS

Identifier: 170078428

GI number: 170078428

Start: 1908353

End: 1908949

Strand: Direct

Name: cpcS

Synonym: SYNPCC7002_A1822

Alternate gene names: 170078428

Gene position: 1908353-1908949 (Clockwise)

Preceding gene: 170078426

Following gene: 170078429

Centisome position: 63.44

GC content: 54.61

Gene sequence:

>597_bases
ATGCAAAGCTTTGCGGATGCCAAGGAATTTTTCCAATACAGTGCCGGACAATGGCAGTCTCGACGCGTTACCCACCACCT
CCCCTTCCGGCGAGCCGAATCCGGTGGTTCGAATATCCAAGTCGAAACCCTCGAAAAAGACGACCCCCGCATCATTGAAA
TTTGCCAGATGCACGACATGGACGCTAGCCTCAGCGTCGGCGGCTCCTATGTCACCTGGGCTGGCACGATGCAATGGGAC
AAAGACGATGAAAACCACGAAGGCAGCACTGTTTTTGCCCTCATCCCCGATGCTGACAACCCCCGCCAAGGAAAACTGTT
GCGGGAGCGCGGCTATGCGGAAATCGTCCCCGTCGCTGGTGAATATCATCTGGATCACGAAGATGGCCTCGTTCTGACCA
CCGAATACGAAACCATGACGATCTACGAACGGTTTTGGTTCGCCAACCCAGACCTACGCCTGCGTACCAGCACCGTAAAA
CGCTTTGGGGGCTTTAACACAACAACTTTTTGTATGGAAGAGCGCATCCAGACATCCCCGGTAACGGCGACTGCGGCTGC
GGAAACCAATCCCCTTTACGCTATTAGCGGTTGGTAG

Upstream 100 bases:

>100_bases
GGAGCGGCCCGAAATTCGTTAAGCTGAAAGATGTTTTTAACAAACACCGATAAAACGATATTTTTGTAATCAGCCAAGAC
CCAGAGGACAATTTTTCGAT

Downstream 100 bases:

>100_bases
TGGGGAATTTTCAGCCATTTTGCCCCACAGAGATATCCGTGTTGCTGTGGTCAAAAAGATTCCGTCTGTCCATAGGCTTT
CGGGGCAAACAGTGTTAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MQSFADAKEFFQYSAGQWQSRRVTHHLPFRRAESGGSNIQVETLEKDDPRIIEICQMHDMDASLSVGGSYVTWAGTMQWD
KDDENHEGSTVFALIPDADNPRQGKLLRERGYAEIVPVAGEYHLDHEDGLVLTTEYETMTIYERFWFANPDLRLRTSTVK
RFGGFNTTTFCMEERIQTSPVTATAAAETNPLYAISGW

Sequences:

>Translated_198_residues
MQSFADAKEFFQYSAGQWQSRRVTHHLPFRRAESGGSNIQVETLEKDDPRIIEICQMHDMDASLSVGGSYVTWAGTMQWD
KDDENHEGSTVFALIPDADNPRQGKLLRERGYAEIVPVAGEYHLDHEDGLVLTTEYETMTIYERFWFANPDLRLRTSTVK
RFGGFNTTTFCMEERIQTSPVTATAAAETNPLYAISGW
>Mature_198_residues
MQSFADAKEFFQYSAGQWQSRRVTHHLPFRRAESGGSNIQVETLEKDDPRIIEICQMHDMDASLSVGGSYVTWAGTMQWD
KDDENHEGSTVFALIPDADNPRQGKLLRERGYAEIVPVAGEYHLDHEDGLVLTTEYETMTIYERFWFANPDLRLRTSTVK
RFGGFNTTTFCMEERIQTSPVTATAAAETNPLYAISGW

Specific function: Attaches a phycocyanobilin (PCB) chromophore to 'Cys-82' of the C-phycocyanain beta subunit (PhcB) and the unique PCB that is attached to allophyocyanin alpha and beta subunits (ApcA and ApcB). In vitro, and probably also in vivo, chromophorylates ApcD an

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CpcS/CpeS biliprotein lyase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CPCS_SYNP2 (A8HTM2)

Other databases:

- EMBL:   EU145731
- EMBL:   CP000951
- RefSeq:   YP_001735066.1
- ProteinModelPortal:   A8HTM2
- GeneID:   6057085
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1822
- HOGENOM:   HBG442183
- OMA:   HHLAFRR
- GO:   GO:0005488
- HAMAP:   MF_01459
- InterPro:   IPR012674
- InterPro:   IPR018536
- Gene3D:   G3DSA:2.40.128.20

Pfam domain/function: PF09367 CpeS

EC number: NA

Molecular weight: Translated: 22525; Mature: 22525

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSFADAKEFFQYSAGQWQSRRVTHHLPFRRAESGGSNIQVETLEKDDPRIIEICQMHDM
CCCHHHHHHHHHHCCCCCCCCCEEECCCCEECCCCCCEEEEEEECCCCCCEEEEEECCCC
DASLSVGGSYVTWAGTMQWDKDDENHEGSTVFALIPDADNPRQGKLLRERGYAEIVPVAG
CCCEECCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCEEEEEECC
EYHLDHEDGLVLTTEYETMTIYERFWFANPDLRLRTSTVKRFGGFNTTTFCMEERIQTSP
EEEECCCCCEEEEECCCEEEEEEEEEECCCCCEEEHHHHHHHCCCCCHHHHHHHHCCCCC
VTATAAAETNPLYAISGW
CEEEECCCCCCEEEEECC
>Mature Secondary Structure
MQSFADAKEFFQYSAGQWQSRRVTHHLPFRRAESGGSNIQVETLEKDDPRIIEICQMHDM
CCCHHHHHHHHHHCCCCCCCCCEEECCCCEECCCCCCEEEEEEECCCCCCEEEEEECCCC
DASLSVGGSYVTWAGTMQWDKDDENHEGSTVFALIPDADNPRQGKLLRERGYAEIVPVAG
CCCEECCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCEEEEEECC
EYHLDHEDGLVLTTEYETMTIYERFWFANPDLRLRTSTVKRFGGFNTTTFCMEERIQTSP
EEEECCCCCEEEEECCCEEEEEEEEEECCCCCEEEHHHHHHHCCCCCHHHHHHHHCCCCC
VTATAAAETNPLYAISGW
CEEEECCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA