| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078306
Identifier: 170078306
GI number: 170078306
Start: 1781772
End: 1783505
Strand: Direct
Name: 170078306
Synonym: SYNPCC7002_A1699
Alternate gene names: NA
Gene position: 1781772-1783505 (Clockwise)
Preceding gene: 170078305
Following gene: 170078307
Centisome position: 59.23
GC content: 35.47
Gene sequence:
>1734_bases ATGGTTTTGCCACTAATTGCGCCACTGATCGGTGGTGTTCTTTCAGGAGTTGGTCTTGCAGCGGGAAAAACATTATTTGA CAAATTTACAAAAAAGAATAGTTCGAGTATCACACCAGCAACGCCTGTTGCCATTGAAAAAGACGATCGATATCAAAAGC TATTACAGCAATATGTAATCCAGCAAGAAAAAAGGGAAGCTGAGTTAAAGCAATTAGTCTTTGCTTCTACAAAGATGCAA GGTCAAATGATTTTGCAGGAGGAAAAATGGAAGGAACTAAATTATCAACAGCAGCAGCAACTCATTGATAATGCCGCTCA ACATAATCAGCGTATTGCAGAGTTAAAAGCCCAGGAGCTAGAGCAAGTTAAAGAACTGGAGCAATTAAAGCTGTCGCTGA TGGAGCAATGGCATCGAGAAAAATTTAGCCAGCAAAATCGCCAAATCTTACAGCAGTGGGATTTAAGCAACTGGAACTCC AAATTAAATCGAGAGGAAACAGAAGATTTACTGCAACCAAAAGAGTTTAAGCATCGACTGCTGACTTTGGTCTCGCGCCC AAAAATTGTAGGCAATGATCTTTTTTGTCTTGATGTTCTCCATGAGCAAATCAAAAGTAGTCTTTTTGATCTAAATGAAC ATATTCCTAGATCAGAATTAGAAGTTTACTGCGACTATTTTAAAAGTCCAATCGAAGATACTGATATTCCTAGGGTACAA AAAATCCTAAATAGTATTCCAACTCTAATTCTCTCAACCAAGATTATCCGTAATCGGATCTATTTTAGTGGTGTCTTTTG GGGAATGGGAGACGAAGAAAATATAATAATTCAGCCTCCTGCTTGGGATATGTCTGAGATTTTTAAACAATCAGATGACC AGGAAGAAGCCATTCTCCAAATTGAGGAAACAATTTCTTATATCCAAAAAATCCTCATTGTTTATATCAAAGATCTATAT TTTTTGAGCTTTAATTTTTACTACGAGCCGACAATACTATCCAACGAATTCCAGAATATCTTTTCAGAGAGTATTGCAAC AACATGTGAATCCTTAAAGGAATCCCTTAGATCAGCTCATGCTGAACAGATCAAACGACTCAAGGTAATGCGAGAAGAAA ATCAGTCAAAATTTAACAAAAATACAATATCAAAATCACAAATTTACGATTTTTCTTTTGAACAAAAACATGCTTCAATA AGTGAATTGTTTCACCCCAAAAACATTGATTATCTTGACGGTTTACGTGAGGCTCAAATAGACCAATTACTTAATGCTCT CGTCAGCAAAAAATCAAGTGAGAACGATGCATTGTTTGTGTGTTTGGATTTGGGTCTAACACATTATGATATGGGGAAAT ATGAGTTTGCCATAACAGACTTCAGTAAGGCTATATCGCTAGATCCCAATGATGATGTTTTTTATCGACTCAGAGGCGAT TCGTACTATTGTTTAAAAAAATACAGTGAAGCAATAGAAGACTATGGTGAAGCAATTAGGCTAAACAAGTTAATTAAGTT GTACTTAAATTCTGAATACCATAATTGCTCTGGATACTACAATATGCGAGGTGTTGCATGCTATCGCCTGGAGAAATACA CAGAGGCATTACAAGATTTTGAAAATGCTCTTAGATTAAATCCCCAAAATCAAAATTCAATATATCTGGATAATAAAAAC CAAATCAAAAAAATTGTCAACTTCGAATCTGAATCAGATGATATGTTATTTTGA
Upstream 100 bases:
>100_bases CGGTGATGGTGTCGCGGATGTGTTTCAAGACTTCCTCGCGAGTCTCGGAAATGTTTTTGAAGATTTACTTTAACTTAATC ACTGTTTTAGAGAATAAAAA
Downstream 100 bases:
>100_bases CTAAGATTATTTTCGAAGTTTTTTCTGAAGTGAGTTTTTGTTTGACGATAGTGCAATCTTTTTGTTTGTCAACAGGATCC AGTCCTCGATCAATGGCTAG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat Family Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; WD40 Domain-Containing Protein; GUN4 Domain-Containing Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide TPR_2 Repeat Protein; Serine/Threonine Protein Kinase
Number of amino acids: Translated: 577; Mature: 577
Protein sequence:
>577_residues MVLPLIAPLIGGVLSGVGLAAGKTLFDKFTKKNSSSITPATPVAIEKDDRYQKLLQQYVIQQEKREAELKQLVFASTKMQ GQMILQEEKWKELNYQQQQQLIDNAAQHNQRIAELKAQELEQVKELEQLKLSLMEQWHREKFSQQNRQILQQWDLSNWNS KLNREETEDLLQPKEFKHRLLTLVSRPKIVGNDLFCLDVLHEQIKSSLFDLNEHIPRSELEVYCDYFKSPIEDTDIPRVQ KILNSIPTLILSTKIIRNRIYFSGVFWGMGDEENIIIQPPAWDMSEIFKQSDDQEEAILQIEETISYIQKILIVYIKDLY FLSFNFYYEPTILSNEFQNIFSESIATTCESLKESLRSAHAEQIKRLKVMREENQSKFNKNTISKSQIYDFSFEQKHASI SELFHPKNIDYLDGLREAQIDQLLNALVSKKSSENDALFVCLDLGLTHYDMGKYEFAITDFSKAISLDPNDDVFYRLRGD SYYCLKKYSEAIEDYGEAIRLNKLIKLYLNSEYHNCSGYYNMRGVACYRLEKYTEALQDFENALRLNPQNQNSIYLDNKN QIKKIVNFESESDDMLF
Sequences:
>Translated_577_residues MVLPLIAPLIGGVLSGVGLAAGKTLFDKFTKKNSSSITPATPVAIEKDDRYQKLLQQYVIQQEKREAELKQLVFASTKMQ GQMILQEEKWKELNYQQQQQLIDNAAQHNQRIAELKAQELEQVKELEQLKLSLMEQWHREKFSQQNRQILQQWDLSNWNS KLNREETEDLLQPKEFKHRLLTLVSRPKIVGNDLFCLDVLHEQIKSSLFDLNEHIPRSELEVYCDYFKSPIEDTDIPRVQ KILNSIPTLILSTKIIRNRIYFSGVFWGMGDEENIIIQPPAWDMSEIFKQSDDQEEAILQIEETISYIQKILIVYIKDLY FLSFNFYYEPTILSNEFQNIFSESIATTCESLKESLRSAHAEQIKRLKVMREENQSKFNKNTISKSQIYDFSFEQKHASI SELFHPKNIDYLDGLREAQIDQLLNALVSKKSSENDALFVCLDLGLTHYDMGKYEFAITDFSKAISLDPNDDVFYRLRGD SYYCLKKYSEAIEDYGEAIRLNKLIKLYLNSEYHNCSGYYNMRGVACYRLEKYTEALQDFENALRLNPQNQNSIYLDNKN QIKKIVNFESESDDMLF >Mature_577_residues MVLPLIAPLIGGVLSGVGLAAGKTLFDKFTKKNSSSITPATPVAIEKDDRYQKLLQQYVIQQEKREAELKQLVFASTKMQ GQMILQEEKWKELNYQQQQQLIDNAAQHNQRIAELKAQELEQVKELEQLKLSLMEQWHREKFSQQNRQILQQWDLSNWNS KLNREETEDLLQPKEFKHRLLTLVSRPKIVGNDLFCLDVLHEQIKSSLFDLNEHIPRSELEVYCDYFKSPIEDTDIPRVQ KILNSIPTLILSTKIIRNRIYFSGVFWGMGDEENIIIQPPAWDMSEIFKQSDDQEEAILQIEETISYIQKILIVYIKDLY FLSFNFYYEPTILSNEFQNIFSESIATTCESLKESLRSAHAEQIKRLKVMREENQSKFNKNTISKSQIYDFSFEQKHASI SELFHPKNIDYLDGLREAQIDQLLNALVSKKSSENDALFVCLDLGLTHYDMGKYEFAITDFSKAISLDPNDDVFYRLRGD SYYCLKKYSEAIEDYGEAIRLNKLIKLYLNSEYHNCSGYYNMRGVACYRLEKYTEALQDFENALRLNPQNQNSIYLDNKN QIKKIVNFESESDDMLF
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67575; Mature: 67575
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLPLIAPLIGGVLSGVGLAAGKTLFDKFTKKNSSSITPATPVAIEKDDRYQKLLQQYVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHH QQEKREAELKQLVFASTKMQGQMILQEEKWKELNYQQQQQLIDNAAQHNQRIAELKAQEL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EQVKELEQLKLSLMEQWHREKFSQQNRQILQQWDLSNWNSKLNREETEDLLQPKEFKHRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHCCCHHHHHHH LTLVSRPKIVGNDLFCLDVLHEQIKSSLFDLNEHIPRSELEVYCDYFKSPIEDTDIPRVQ HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHH KILNSIPTLILSTKIIRNRIYFSGVFWGMGDEENIIIQPPAWDMSEIFKQSDDQEEAILQ HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEECCCCCHHHHHHCCCCHHHHHHH IEETISYIQKILIVYIKDLYFLSFNFYYEPTILSNEFQNIFSESIATTCESLKESLRSAH HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEQIKRLKVMREENQSKFNKNTISKSQIYDFSFEQKHASISELFHPKNIDYLDGLREAQI HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH DQLLNALVSKKSSENDALFVCLDLGLTHYDMGKYEFAITDFSKAISLDPNDDVFYRLRGD HHHHHHHHHCCCCCCCEEEEEEECCCCEECCCCEEEEEECHHHHCCCCCCCCEEEEECCC SYYCLKKYSEAIEDYGEAIRLNKLIKLYLNSEYHNCSGYYNMRGVACYRLEKYTEALQDF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ENALRLNPQNQNSIYLDNKNQIKKIVNFESESDDMLF HHHHCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MVLPLIAPLIGGVLSGVGLAAGKTLFDKFTKKNSSSITPATPVAIEKDDRYQKLLQQYVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCHHHHHHHHHHHH QQEKREAELKQLVFASTKMQGQMILQEEKWKELNYQQQQQLIDNAAQHNQRIAELKAQEL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH EQVKELEQLKLSLMEQWHREKFSQQNRQILQQWDLSNWNSKLNREETEDLLQPKEFKHRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHCCCHHHHHHH LTLVSRPKIVGNDLFCLDVLHEQIKSSLFDLNEHIPRSELEVYCDYFKSPIEDTDIPRVQ HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHH KILNSIPTLILSTKIIRNRIYFSGVFWGMGDEENIIIQPPAWDMSEIFKQSDDQEEAILQ HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEECCCCCHHHHHHCCCCHHHHHHH IEETISYIQKILIVYIKDLYFLSFNFYYEPTILSNEFQNIFSESIATTCESLKESLRSAH HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEQIKRLKVMREENQSKFNKNTISKSQIYDFSFEQKHASISELFHPKNIDYLDGLREAQI HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH DQLLNALVSKKSSENDALFVCLDLGLTHYDMGKYEFAITDFSKAISLDPNDDVFYRLRGD HHHHHHHHHCCCCCCCEEEEEEECCCCEECCCCEEEEEECHHHHCCCCCCCCEEEEECCC SYYCLKKYSEAIEDYGEAIRLNKLIKLYLNSEYHNCSGYYNMRGVACYRLEKYTEALQDF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ENALRLNPQNQNSIYLDNKNQIKKIVNFESESDDMLF HHHHCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA