| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is malE [C]
Identifier: 169628463
GI number: 169628463
Start: 1369306
End: 1370730
Strand: Direct
Name: malE [C]
Synonym: MAB_1372
Alternate gene names: 169628463
Gene position: 1369306-1370730 (Clockwise)
Preceding gene: 169628462
Following gene: 169628464
Centisome position: 27.02
GC content: 66.6
Gene sequence:
>1425_bases GTGCTGGAGTCGTCGGCCAGATGGTTCCGACGCAAGGGTGTGGCGCTGGGCTCGTCCCTGCTGACCTGCCTGACGCTGGC TTCGCTGACCGGATGTGCCCGCTCCGACGACCAGATCGTGATCCGCTTCTATACTCCGGCCAGCGAGGCGGGGACGTTCT CCGCCGCCGCACAGCGATGCAATAGGGAGCTGGGCGGCCGGTTCACCATTCTGCAGGTCAGTCTGCCGAAACGCGCCGAC GAGCAGCGGTTGCAGCTCGCGCGCCGGCTGACCGGCAACGACCGGACCCTGGACCTGATGGGGATGGACGTGGTGTGGAC CGCCGAGTTCGCCGAAGCTGGTTGGGCGCTACCGCTTTCCGACGACCCAGCGGGTGTGACCGAGGCCGCCGCGCAGCGTG ACGCCCTCGCGGGACCGCTGGAGAGCGCCCGGTGGAAGGGCAAGCTGTACGCCGCCCCGTTGAGCACCAATACTCAGCTG CTTTGGTACCGCAAGGATCTGGTTCCCGAACCGCCCGCTACATGGGATCAGACGGTGCGCGAGGCGGAGAATTTCGCGCG GTCTGAGGGTCCCAGCTGGATTGCTCTGCAGGGCAAGCAGTATGAGGGTCTGGTGGTTCTGTTCAACACACTGCTGTCCA GCGCGGGCGGCTCCGTTCTGGCCGGTGACGGTAAGACCGTTACGTTGACGGACACCCCGGCGCACCGGCAGGCCACGGTC ACTGCCTTGCGGACCATGAAATCGATCGCGACAGCCGATGGGGCCGATCCCTCGATCACGCAGACCGACGAGGGCACAGC ACGTTTGGCATTCGAGCAGGGCAAGGCGGCATTCGAGATCAATTGGCCATTTGTGATGGCCAGCATGATGGAGAACGCCA TCAAGGGTGGCGTCCCGTTCTTGCGACTGGACCGGCGGCCGGACCTGACCGGCGCGATCGGCGATGCGGGCCGATTCGCG CCGAGCGAGGAGCAGTTCGCGGCGGCGTACGAGGCTGCCAGCGCGGCGCTCGGTTTCGCGCCATTTCCCTCCGTGGTGGC CGGCCAGCCGGCCCGGGTCACCATTGGCGGGCTGAACATCGCGGTCGCCAAGACAACGCGATACAAGGCGCAGGCCTTCG AGGCGCTGAACTGTCTGCGCAGCCGGGAGAACCAGAAGGCGACAGCCATCGAGGGCGGCTTGCCGGCGGTCGACTCGTCT CTGTACGACGATCCGGAGTTCCAGGCGAAATATCCGGCGTACGCGATCATTCGCGACCAACTGGCCAACGCCGCGGTGCG TCCCGCCTCGCCCTACTATCAAGCCATCTCGACGCGGGTCTCCGCCGTGTTGGCGCCGATCACCGGTATCGATCCCGAGC GCACGGCGGACCTGCTGAACGATCAGGTGCAGAAGGCCGTCGACGGGCGGGGGCTGATCCCGTGA
Upstream 100 bases:
>100_bases TCACCTGGTTTTCGCTCTACGGTTGCCGCGCGGGACGGGTGTACCCGCCGTGTGGGCACGCGGAGGTGCTTGAGACACGT CAACGGACCAGGAGGCGGTC
Downstream 100 bases:
>100_bases CCGACAGGACAAGCTCCGAGGGCAAGAGGGCCGAACGCCGGCTGGGGCTGCTACTCATCGCGCCGGCAGCGCTGCTGATG TTGGCGGTCACCGCATATCC
Product: sugar ABC transporter, sugar-binding protein LpqY
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MLESSARWFRRKGVALGSSLLTCLTLASLTGCARSDDQIVIRFYTPASEAGTFSAAAQRCNRELGGRFTILQVSLPKRAD EQRLQLARRLTGNDRTLDLMGMDVVWTAEFAEAGWALPLSDDPAGVTEAAAQRDALAGPLESARWKGKLYAAPLSTNTQL LWYRKDLVPEPPATWDQTVREAENFARSEGPSWIALQGKQYEGLVVLFNTLLSSAGGSVLAGDGKTVTLTDTPAHRQATV TALRTMKSIATADGADPSITQTDEGTARLAFEQGKAAFEINWPFVMASMMENAIKGGVPFLRLDRRPDLTGAIGDAGRFA PSEEQFAAAYEAASAALGFAPFPSVVAGQPARVTIGGLNIAVAKTTRYKAQAFEALNCLRSRENQKATAIEGGLPAVDSS LYDDPEFQAKYPAYAIIRDQLANAAVRPASPYYQAISTRVSAVLAPITGIDPERTADLLNDQVQKAVDGRGLIP
Sequences:
>Translated_474_residues MLESSARWFRRKGVALGSSLLTCLTLASLTGCARSDDQIVIRFYTPASEAGTFSAAAQRCNRELGGRFTILQVSLPKRAD EQRLQLARRLTGNDRTLDLMGMDVVWTAEFAEAGWALPLSDDPAGVTEAAAQRDALAGPLESARWKGKLYAAPLSTNTQL LWYRKDLVPEPPATWDQTVREAENFARSEGPSWIALQGKQYEGLVVLFNTLLSSAGGSVLAGDGKTVTLTDTPAHRQATV TALRTMKSIATADGADPSITQTDEGTARLAFEQGKAAFEINWPFVMASMMENAIKGGVPFLRLDRRPDLTGAIGDAGRFA PSEEQFAAAYEAASAALGFAPFPSVVAGQPARVTIGGLNIAVAKTTRYKAQAFEALNCLRSRENQKATAIEGGLPAVDSS LYDDPEFQAKYPAYAIIRDQLANAAVRPASPYYQAISTRVSAVLAPITGIDPERTADLLNDQVQKAVDGRGLIP >Mature_474_residues MLESSARWFRRKGVALGSSLLTCLTLASLTGCARSDDQIVIRFYTPASEAGTFSAAAQRCNRELGGRFTILQVSLPKRAD EQRLQLARRLTGNDRTLDLMGMDVVWTAEFAEAGWALPLSDDPAGVTEAAAQRDALAGPLESARWKGKLYAAPLSTNTQL LWYRKDLVPEPPATWDQTVREAENFARSEGPSWIALQGKQYEGLVVLFNTLLSSAGGSVLAGDGKTVTLTDTPAHRQATV TALRTMKSIATADGADPSITQTDEGTARLAFEQGKAAFEINWPFVMASMMENAIKGGVPFLRLDRRPDLTGAIGDAGRFA PSEEQFAAAYEAASAALGFAPFPSVVAGQPARVTIGGLNIAVAKTTRYKAQAFEALNCLRSRENQKATAIEGGLPAVDSS LYDDPEFQAKYPAYAIIRDQLANAAVRPASPYYQAISTRVSAVLAPITGIDPERTADLLNDQVQKAVDGRGLIP
Specific function: Probably part of a binding-protein-dependent transport system [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 50833; Mature: 50833
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLESSARWFRRKGVALGSSLLTCLTLASLTGCARSDDQIVIRFYTPASEAGTFSAAAQRC CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHH NRELGGRFTILQVSLPKRADEQRLQLARRLTGNDRTLDLMGMDVVWTAEFAEAGWALPLS HHHHCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEHHHHCCCCCCCC DDPAGVTEAAAQRDALAGPLESARWKGKLYAAPLSTNTQLLWYRKDLVPEPPATWDQTVR CCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHH EAENFARSEGPSWIALQGKQYEGLVVLFNTLLSSAGGSVLAGDGKTVTLTDTPAHRQATV HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCHHHHH TALRTMKSIATADGADPSITQTDEGTARLAFEQGKAAFEINWPFVMASMMENAIKGGVPF HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHCCCCE LRLDRRPDLTGAIGDAGRFAPSEEQFAAAYEAASAALGFAPFPSVVAGQPARVTIGGLNI EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEECCEE AVAKTTRYKAQAFEALNCLRSRENQKATAIEGGLPAVDSSLYDDPEFQAKYPAYAIIRDQ EEEECHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH LANAAVRPASPYYQAISTRVSAVLAPITGIDPERTADLLNDQVQKAVDGRGLIP HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLESSARWFRRKGVALGSSLLTCLTLASLTGCARSDDQIVIRFYTPASEAGTFSAAAQRC CCCCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHH NRELGGRFTILQVSLPKRADEQRLQLARRLTGNDRTLDLMGMDVVWTAEFAEAGWALPLS HHHHCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCEEEEEHHHHCCCCCCCC DDPAGVTEAAAQRDALAGPLESARWKGKLYAAPLSTNTQLLWYRKDLVPEPPATWDQTVR CCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHH EAENFARSEGPSWIALQGKQYEGLVVLFNTLLSSAGGSVLAGDGKTVTLTDTPAHRQATV HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCEEEEECCCCCHHHHH TALRTMKSIATADGADPSITQTDEGTARLAFEQGKAAFEINWPFVMASMMENAIKGGVPF HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHCCCCE LRLDRRPDLTGAIGDAGRFAPSEEQFAAAYEAASAALGFAPFPSVVAGQPARVTIGGLNI EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEECCEE AVAKTTRYKAQAFEALNCLRSRENQKATAIEGGLPAVDSSLYDDPEFQAKYPAYAIIRDQ EEEECHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH LANAAVRPASPYYQAISTRVSAVLAPITGIDPERTADLLNDQVQKAVDGRGLIP HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]