| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628462
Identifier: 169628462
GI number: 169628462
Start: 1368585
End: 1369106
Strand: Direct
Name: 169628462
Synonym: MAB_1371
Alternate gene names: NA
Gene position: 1368585-1369106 (Clockwise)
Preceding gene: 169628460
Following gene: 169628463
Centisome position: 27.01
GC content: 63.41
Gene sequence:
>522_bases GTGGGACAACCGCTCACACCCGGGCAACCACCACGCTCGACGTCACAGCGCTCCCCGCTGTCTTCGTCATTGTCTCTGCC GACACCGCCACAGGGCTGGCCTATCGGTTCATATCCGACCTACGCGGAGGCCCAGCGCGCCGTCGACTATCTGTCCGATG AGCAGTTCCCGGTCGAGAACGTCACGATCGTCGGGGTGAATCTGATGCAGGTGGAACGGGTCACCGGTCGCCTGTCCTGG CCCAAGGTGCTGGGTGGGGGCATGCTCAGCGGCGCGTGGCTGGGTTTGTTCATCGGCCTGGTGCTGGGAATGTTCAGCAC GAATTTGGCCGGATCTTTGGTGGTAGGGCTGACTGTCGGCCTGGTGTTCGGACTGGTCACTGCCGCGGTACCTTATGCCA TGACAAGGGGCACAAGGGATTTCGCATCGACGATGCAGCTGGTCGCGGGGCGTTACGACGTGCTGTGCGAGCCGGCGCAG GCCGAGGCCGCGCGCGACATGTTGGCCAAATTAGCCATCTAG
Upstream 100 bases:
>100_bases GGTCGCGGTCAAAGGGGCACCAACTGGTGCTCCTGGGCGTTAAATAAGTGCTAGCTAGTGCGCCATCGTGCGCCGCCGAC TCTCCAGGAGGACCGTACTC
Downstream 100 bases:
>100_bases ACCCGGCCTGTTTCGCGCCCTATGGCGCTGGCCGGTGCTGTCTCCGGTGGCTGCTGAGCCCGACACCGCGGACAGCGCCC GCACCGAACATGTTGCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MGQPLTPGQPPRSTSQRSPLSSSLSLPTPPQGWPIGSYPTYAEAQRAVDYLSDEQFPVENVTIVGVNLMQVERVTGRLSW PKVLGGGMLSGAWLGLFIGLVLGMFSTNLAGSLVVGLTVGLVFGLVTAAVPYAMTRGTRDFASTMQLVAGRYDVLCEPAQ AEAARDMLAKLAI
Sequences:
>Translated_173_residues MGQPLTPGQPPRSTSQRSPLSSSLSLPTPPQGWPIGSYPTYAEAQRAVDYLSDEQFPVENVTIVGVNLMQVERVTGRLSW PKVLGGGMLSGAWLGLFIGLVLGMFSTNLAGSLVVGLTVGLVFGLVTAAVPYAMTRGTRDFASTMQLVAGRYDVLCEPAQ AEAARDMLAKLAI >Mature_172_residues GQPLTPGQPPRSTSQRSPLSSSLSLPTPPQGWPIGSYPTYAEAQRAVDYLSDEQFPVENVTIVGVNLMQVERVTGRLSWP KVLGGGMLSGAWLGLFIGLVLGMFSTNLAGSLVVGLTVGLVFGLVTAAVPYAMTRGTRDFASTMQLVAGRYDVLCEPAQA EAARDMLAKLAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18298; Mature: 18167
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQPLTPGQPPRSTSQRSPLSSSLSLPTPPQGWPIGSYPTYAEAQRAVDYLSDEQFPVEN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC VTIVGVNLMQVERVTGRLSWPKVLGGGMLSGAWLGLFIGLVLGMFSTNLAGSLVVGLTVG EEEECCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFGLVTAAVPYAMTRGTRDFASTMQLVAGRYDVLCEPAQAEAARDMLAKLAI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure GQPLTPGQPPRSTSQRSPLSSSLSLPTPPQGWPIGSYPTYAEAQRAVDYLSDEQFPVEN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC VTIVGVNLMQVERVTGRLSWPKVLGGGMLSGAWLGLFIGLVLGMFSTNLAGSLVVGLTVG EEEECCHHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVFGLVTAAVPYAMTRGTRDFASTMQLVAGRYDVLCEPAQAEAARDMLAKLAI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA